Cow genome map

Conread name: rthg11_h16.y1

Conread position: 159-614
Cow position:
Alignm length: 467
Alignm identity: 312
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 28, 86

Conread position: 162-613
Cow position:
Alignm length: 467
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 41

Conread position: 162-614
Cow position:
Alignm length: 462
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 61

Conread position: 164-456
Cow position:
Alignm length: 298
Alignm identity: 208
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 203, 85

Conread position: 164-591
Cow position:
Alignm length: 446
Alignm identity: 308
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 215, 55

Conread position: 164-614
Cow position:
Alignm length: 465
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 81

Conread position: 170-460
Cow position:
Alignm length: 293
Alignm identity: 192
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 58

Conread position: 170-614
Cow position:
Alignm length: 459
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 80

Conread position: 170-614
Cow position:
Alignm length: 458
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 75

Conread position: 171-452
Cow position:
Alignm length: 287
Alignm identity: 204
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 196, 19

Conread position: 171-458
Cow position:
Alignm length: 292
Alignm identity: 206
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 234, 60

Conread position: 171-460
Cow position:
Alignm length: 303
Alignm identity: 220
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 97, 77

Conread position: 171-473
Cow position:
Alignm length: 311
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 72

Conread position: 171-489
Cow position:
Alignm length: 342
Alignm identity: 241
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 88, 220

Conread position: 171-505
Cow position:
Alignm length: 349
Alignm identity: 251
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 207, 80

Conread position: 171-524
Cow position:
Alignm length: 368
Alignm identity: 242
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 115, 95

Conread position: 171-552
Cow position:
Alignm length: 399
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 65

Conread position: 171-557
Cow position:
Alignm length: 403
Alignm identity: 287
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 45, 40

Conread position: 171-585
Cow position:
Alignm length: 431
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 74

Conread position: 171-591
Cow position:
Alignm length: 431
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 91

Conread position: 171-593
Cow position:
Alignm length: 436
Alignm identity: 296
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 192, 69

Conread position: 171-594
Cow position:
Alignm length: 438
Alignm identity: 290
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 203, 73

Conread position: 171-595
Cow position:
Alignm length: 434
Alignm identity: 292
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 46, 73

Conread position: 171-602
Cow position:
Alignm length: 437
Alignm identity: 293
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 125, 74

Conread position: 171-602
Cow position:
Alignm length: 436
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 44

Conread position: 171-602
Cow position:
Alignm length: 452
Alignm identity: 311
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 196, 72

Conread position: 171-603
Cow position:
Alignm length: 450
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 17

Conread position: 171-610
Cow position:
Alignm length: 458
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 51

Conread position: 171-611
Cow position:
Alignm length: 458
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 74

Conread position: 171-612
Cow position:
Alignm length: 461
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 78

Conread position: 171-612
Cow position:
Alignm length: 450
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 74

Conread position: 171-612
Cow position:
Alignm length: 457
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 68

Conread position: 171-612
Cow position:
Alignm length: 450
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 54

Conread position: 171-614
Cow position:
Alignm length: 459
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 74

Conread position: 171-614
Cow position:
Alignm length: 454
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 123

Conread position: 171-614
Cow position:
Alignm length: 464
Alignm identity: 312
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 78, 88

Conread position: 171-614
Cow position:
Alignm length: 453
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 60

Conread position: 171-614
Cow position:
Alignm length: 454
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 77

Conread position: 171-614
Cow position:
Alignm length: 463
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 102

Conread position: 171-614
Cow position:
Alignm length: 453
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 44

Conread position: 171-614
Cow position:
Alignm length: 456
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 50

Conread position: 171-614
Cow position:
Alignm length: 477
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 44

Conread position: 172-605
Cow position:
Alignm length: 460
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 197

Conread position: 172-612
Cow position:
Alignm length: 456
Alignm identity: 305
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 189, 73

Conread position: 172-614
Cow position:
Alignm length: 454
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 73

Conread position: 173-419
Cow position:
Alignm length: 257
Alignm identity: 191
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 31, 77

Conread position: 173-611
Cow position:
Alignm length: 451
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 72

Conread position: 175-345
Cow position:
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 175-612
Cow position:
Alignm length: 441
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 76

Conread position: 176-614
Cow position:
Alignm length: 453
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 84

Conread position: 177-614
Cow position:
Alignm length: 443
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 68

Conread position: 183-614
Cow position:
Alignm length: 459
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 52

Conread position: 187-597
Cow position:
Alignm length: 419
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 57

Conread position: 188-614
Cow position:
Alignm length: 437
Alignm identity: 289
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 119, 57

Conread position: 195-598
Cow position:
Alignm length: 419
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 50

Conread position: 200-519
Cow position:
Alignm length: 339
Alignm identity: 235
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 50, 86

Conread position: 216-492
Cow position:
Alignm length: 288
Alignm identity: 208
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 58, 74

Conread position: 223-476
Cow position:
Alignm length: 274
Alignm identity: 192
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 19, 185

Conread position: 224-452
Cow position:
Alignm length: 239
Alignm identity: 176
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 142, 60

Conread position: 228-614
Cow position:
Alignm length: 401
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 23

Conread position: 228-614
Cow position:
Alignm length: 391
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 47

Conread position: 246-480
Cow position:
Alignm length: 245
Alignm identity: 183
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 49, 27

Conread position: 249-596
Cow position:
Alignm length: 366
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 18

Conread position: 271-614
Cow position:
Alignm length: 358
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 99

Conread position: 274-591
Cow position:
Alignm length: 330
Alignm identity: 220
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 106, 36

Conread position: 277-538
Cow position:
Alignm length: 269
Alignm identity: 200
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 129, 19

Conread position: 279-452
Cow position:
Alignm length: 190
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 8

Conread position: 282-553
Cow position:
Alignm length: 294
Alignm identity: 205
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 29

Conread position: 282-593
Cow position:
Alignm length: 334
Alignm identity: 236
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 12, 210

Conread position: 282-605
Cow position:
Alignm length: 331
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 188

Conread position: 282-611
Cow position:
Alignm length: 349
Alignm identity: 248
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 14, 217

Conread position: 282-614
Cow position:
Alignm length: 349
Alignm identity: 242
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 13, 215

Conread position: 283-521
Cow position:
Alignm length: 251
Alignm identity: 188
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 84, 13

Conread position: 288-538
Cow position:
Alignm length: 267
Alignm identity: 197
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 92, 252

Conread position: 292-522
Cow position:
Alignm length: 232
Alignm identity: 164
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 191, 69

Conread position: 292-524
Cow position:
Alignm length: 241
Alignm identity: 177
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 123, 67

Conread position: 292-534
Cow position:
Alignm length: 255
Alignm identity: 186
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 63, 213

Conread position: 292-537
Cow position:
Alignm length: 250
Alignm identity: 188
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 88, 177

Conread position: 292-578
Cow position:
Alignm length: 295
Alignm identity: 210
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 172, 69

Conread position: 292-598
Cow position:
Alignm length: 320
Alignm identity: 223
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 123, 68

Conread position: 292-602
Cow position:
Alignm length: 326
Alignm identity: 234
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 75, 55

Conread position: 292-611
Cow position:
Alignm length: 342
Alignm identity: 234
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 83, 209

Conread position: 292-613
Cow position:
Alignm length: 330
Alignm identity: 233
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 120, 62

Conread position: 292-614
Cow position:
Alignm length: 336
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 88

Conread position: 292-614
Cow position:
Alignm length: 331
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 63

Conread position: 292-614
Cow position:
Alignm length: 334
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 269

Conread position: 292-614
Cow position:
Alignm length: 331
Alignm identity: 230
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 114, 30

Conread position: 292-614
Cow position:
Alignm length: 329
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 75

Conread position: 292-614
Cow position:
Alignm length: 328
Alignm identity: 237
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 67, 174

Conread position: 292-614
Cow position:
Alignm length: 328
Alignm identity: 226
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 69, 56

Conread position: 292-614
Cow position:
Alignm length: 328
Alignm identity: 234
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 166, 83

Conread position: 292-614
Cow position:
Alignm length: 339
Alignm identity: 233
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 75, 269

Conread position: 292-614
Cow position:
Alignm length: 331
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 57

Conread position: 292-614
Cow position:
Alignm length: 332
Alignm identity: 236
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 88, 201

Conread position: 292-614
Cow position:
Alignm length: 333
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 203

Conread position: 293-443
Cow position:
Alignm length: 160
Alignm identity: 125
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 69, 0

Conread position: 298-598
Cow position:
Alignm length: 311
Alignm identity: 232
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 62, 166

Conread position: 300-579
Cow position:
Alignm length: 292
Alignm identity: 205
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 67, 204

Conread position: 300-612
Cow position:
Alignm length: 328
Alignm identity: 225
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 67, 208

Conread position: 300-614
Cow position:
Alignm length: 326
Alignm identity: 235
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 60, 196

Conread position: 301-614
Cow position:
Alignm length: 326
Alignm identity: 219
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 74

Conread position: 304-605
Cow position:
Alignm length: 321
Alignm identity: 228
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 57, 17

Conread position: 308-593
Cow position:
Alignm length: 298
Alignm identity: 197
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 64, 8

Conread position: 309-613
Cow position:
Alignm length: 317
Alignm identity: 224
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 37, 141

Conread position: 312-612
Cow position:
Alignm length: 315
Alignm identity: 226
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 23, 105

Conread position: 313-612
Cow position:
Alignm length: 309
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 18

Conread position: 316-614
Cow position:
Alignm length: 309
Alignm identity: 212
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 96, 38

Conread position: 317-612
Cow position:
Alignm length: 318
Alignm identity: 216
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 50, 196

Conread position: 321-524
Cow position:
Alignm length: 214
Alignm identity: 153
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 46, 176

Conread position: 322-614
Cow position:
Alignm length: 313
Alignm identity: 215
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 135

Conread position: 322-614
Cow position:
Alignm length: 305
Alignm identity: 216
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 56, 82

Conread position: 323-614
Cow position:
Alignm length: 305
Alignm identity: 214
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 38, 142

Conread position: 326-605
Cow position:
Alignm length: 296
Alignm identity: 210
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 54, 171

Conread position: 331-614
Cow position:
Alignm length: 292
Alignm identity: 210
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 81, 117

Conread position: 336-562
Cow position:
Alignm length: 236
Alignm identity: 180
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 34, 0

Conread position: 336-612
Cow position:
Alignm length: 288
Alignm identity: 199
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 33, 225

Conread position: 355-599
Cow position:
Alignm length: 255
Alignm identity: 180
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 57, 21

Conread position: 355-614
Cow position:
Alignm length: 266
Alignm identity: 180
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 58, 112

Conread position: 362-594
Cow position:
Alignm length: 239
Alignm identity: 163
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 47, 131

Conread position: 362-612
Cow position:
Alignm length: 264
Alignm identity: 182
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 50, 21

Conread position: 363-598
Cow position:
Alignm length: 239
Alignm identity: 175
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 54, 79

Conread position: 363-602
Cow position:
Alignm length: 248
Alignm identity: 168
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 52, 131

Conread position: 363-614
Cow position:
Alignm length: 266
Alignm identity: 190
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 95, 49

Conread position: 365-611
Cow position:
Alignm length: 260
Alignm identity: 177
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 50, 198

Conread position: 366-614
Cow position:
Alignm length: 257
Alignm identity: 187
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 46, 199

Conread position: 366-614
Cow position:
Alignm length: 257
Alignm identity: 174
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 165

Conread position: 369-614
Cow position:
Alignm length: 259
Alignm identity: 174
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 14

Conread position: 371-614
Cow position:
Alignm length: 250
Alignm identity: 173
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 93, 194

Conread position: 371-614
Cow position:
Alignm length: 251
Alignm identity: 177
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 41, 109

Conread position: 378-614
Cow position:
Alignm length: 241
Alignm identity: 167
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 79, 11

Conread position: 383-614
Cow position:
Alignm length: 238
Alignm identity: 172
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 29, 189

Conread position: 386-614
Cow position:
Alignm length: 236
Alignm identity: 162
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 109

Conread position: 392-613
Cow position:
Alignm length: 231
Alignm identity: 169
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 20, 113

Conread position: 405-614
Cow position:
Alignm length: 214
Alignm identity: 148
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 9, 86

Conread position: 405-614
Cow position:
Alignm length: 213
Alignm identity: 152
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 54, 59

Conread position: 406-601
Cow position:
Alignm length: 202
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 75

Conread position: 406-614
Cow position:
Alignm length: 216
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 115

Conread position: 418-614
Cow position:
Alignm length: 207
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 138

Conread position: 447-614
Cow position:
Alignm length: 169
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 14

Conread position: 448-612
Cow position:
Alignm length: 167
Alignm identity: 118
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 11, 111

Conread position: 448-614
Cow position:
Alignm length: 168
Alignm identity: 125
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 79, 8

Conread position: 448-614
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 11, 16

Conread position: 451-614
Cow position:
Alignm length: 166
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 7, 39

Conread position: 458-614
Cow position:
Alignm length: 158
Alignm identity: 115
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 69, 45

Conread position: 458-614
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 72, 34

Show alignments to all cow chromosomes.