Cow genome map

Conread name: rthg11_h16.y1

Conread position: 156-614
Cow position:
Alignm length: 464
Alignm identity: 307
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 211, 87

Conread position: 158-562
Cow position:
Alignm length: 420
Alignm identity: 289
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 213, 86

Conread position: 158-574
Cow position:
Alignm length: 423
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 48

Conread position: 162-525
Cow position:
Alignm length: 379
Alignm identity: 266
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 143, 87

Conread position: 170-458
Cow position:
Alignm length: 298
Alignm identity: 214
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 108, 38

Conread position: 170-598
Cow position:
Alignm length: 443
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 29

Conread position: 170-610
Cow position:
Alignm length: 452
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 75

Conread position: 170-611
Cow position:
Alignm length: 459
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 61

Conread position: 170-614
Cow position:
Alignm length: 452
Alignm identity: 308
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 210, 39

Conread position: 171-451
Cow position:
Alignm length: 281
Alignm identity: 189
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 171-456
Cow position:
Alignm length: 295
Alignm identity: 217
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 13, 62

Conread position: 171-456
Cow position:
Alignm length: 286
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 171-480
Cow position:
Alignm length: 316
Alignm identity: 226
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 190, 78

Conread position: 171-480
Cow position:
Alignm length: 329
Alignm identity: 232
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 66, 51

Conread position: 171-484
Cow position:
Alignm length: 328
Alignm identity: 230
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 49, 39

Conread position: 171-500
Cow position:
Alignm length: 343
Alignm identity: 239
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 125, 74

Conread position: 171-508
Cow position:
Alignm length: 346
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 40

Conread position: 171-545
Cow position:
Alignm length: 385
Alignm identity: 266
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 209, 22

Conread position: 171-552
Cow position:
Alignm length: 394
Alignm identity: 267
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 97, 25

Conread position: 171-596
Cow position:
Alignm length: 435
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 73

Conread position: 171-602
Cow position:
Alignm length: 439
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 121

Conread position: 171-603
Cow position:
Alignm length: 439
Alignm identity: 297
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 176, 74

Conread position: 171-605
Cow position:
Alignm length: 464
Alignm identity: 319
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 104, 42

Conread position: 171-610
Cow position:
Alignm length: 452
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 78

Conread position: 171-611
Cow position:
Alignm length: 448
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 64

Conread position: 171-611
Cow position:
Alignm length: 455
Alignm identity: 313
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 204, 74

Conread position: 171-611
Cow position:
Alignm length: 464
Alignm identity: 314
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 164, 74

Conread position: 171-613
Cow position:
Alignm length: 460
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 22

Conread position: 171-613
Cow position:
Alignm length: 454
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 122

Conread position: 171-614
Cow position:
Alignm length: 455
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 74

Conread position: 171-614
Cow position:
Alignm length: 457
Alignm identity: 311
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 189, 91

Conread position: 171-614
Cow position:
Alignm length: 452
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 34

Conread position: 171-614
Cow position:
Alignm length: 465
Alignm identity: 315
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 100, 74

Conread position: 171-614
Cow position:
Alignm length: 452
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 73

Conread position: 171-614
Cow position:
Alignm length: 456
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 42

Conread position: 171-614
Cow position:
Alignm length: 454
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 73

Conread position: 171-614
Cow position:
Alignm length: 448
Alignm identity: 307
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 105, 74

Conread position: 171-614
Cow position:
Alignm length: 454
Alignm identity: 310
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 241, 28

Conread position: 171-614
Cow position:
Alignm length: 459
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 22

Conread position: 171-614
Cow position:
Alignm length: 461
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 53

Conread position: 171-614
Cow position:
Alignm length: 465
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 75

Conread position: 171-614
Cow position:
Alignm length: 453
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 33

Conread position: 171-614
Cow position:
Alignm length: 463
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 74

Conread position: 171-614
Cow position:
Alignm length: 456
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 78

Conread position: 171-614
Cow position:
Alignm length: 462
Alignm identity: 315
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 94, 73

Conread position: 172-538
Cow position:
Alignm length: 384
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 72

Conread position: 172-611
Cow position:
Alignm length: 464
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 75

Conread position: 172-614
Cow position:
Alignm length: 448
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 22

Conread position: 173-535
Cow position:
Alignm length: 369
Alignm identity: 264
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 228, 50

Conread position: 173-557
Cow position:
Alignm length: 395
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 53

Conread position: 173-590
Cow position:
Alignm length: 423
Alignm identity: 286
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 240, 70

Conread position: 173-612
Cow position:
Alignm length: 452
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 76

Conread position: 173-614
Cow position:
Alignm length: 472
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 414

Conread position: 173-614
Cow position:
Alignm length: 458
Alignm identity: 307
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 124, 72

Conread position: 173-614
Cow position:
Alignm length: 449
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 31

Conread position: 174-605
Cow position:
Alignm length: 439
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 71

Conread position: 174-612
Cow position:
Alignm length: 448
Alignm identity: 297
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 94, 71

Conread position: 174-614
Cow position:
Alignm length: 451
Alignm identity: 295
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 33, 75

Conread position: 175-614
Cow position:
Alignm length: 456
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 48

Conread position: 177-611
Cow position:
Alignm length: 446
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 66

Conread position: 177-614
Cow position:
Alignm length: 449
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 68

Conread position: 177-614
Cow position:
Alignm length: 449
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 100

Conread position: 178-613
Cow position:
Alignm length: 443
Alignm identity: 294
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 46, 37

Conread position: 179-612
Cow position:
Alignm length: 448
Alignm identity: 306
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 70, 25

Conread position: 180-524
Cow position:
Alignm length: 365
Alignm identity: 254
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 179, 108

Conread position: 181-614
Cow position:
Alignm length: 444
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 64

Conread position: 184-443
Cow position:
Alignm length: 272
Alignm identity: 192
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 112, 81

Conread position: 188-584
Cow position:
Alignm length: 400
Alignm identity: 266
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 88, 61

Conread position: 192-614
Cow position:
Alignm length: 448
Alignm identity: 306
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 56, 123

Conread position: 218-462
Cow position:
Alignm length: 252
Alignm identity: 176
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 141, 27

Conread position: 219-593
Cow position:
Alignm length: 390
Alignm identity: 255
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 43, 54

Conread position: 220-614
Cow position:
Alignm length: 404
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 25

Conread position: 223-576
Cow position:
Alignm length: 366
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 233-444
Cow position:
Alignm length: 218
Alignm identity: 163
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 179, 12

Conread position: 240-510
Cow position:
Alignm length: 285
Alignm identity: 205
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 19, 256

Conread position: 247-614
Cow position:
Alignm length: 382
Alignm identity: 263
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 29, 23

Conread position: 248-614
Cow position:
Alignm length: 379
Alignm identity: 263
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 6, 44

Conread position: 249-611
Cow position:
Alignm length: 385
Alignm identity: 273
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 9, 81

Conread position: 252-552
Cow position:
Alignm length: 311
Alignm identity: 227
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 24, 18

Conread position: 252-614
Cow position:
Alignm length: 376
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 151

Conread position: 253-600
Cow position:
Alignm length: 357
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 17

Conread position: 263-614
Cow position:
Alignm length: 356
Alignm identity: 245
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 30, 8

Conread position: 265-444
Cow position:
Alignm length: 183
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 97

Conread position: 265-460
Cow position:
Alignm length: 213
Alignm identity: 156
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 10

Conread position: 277-614
Cow position:
Alignm length: 345
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 82

Conread position: 282-591
Cow position:
Alignm length: 320
Alignm identity: 223
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 14, 187

Conread position: 282-611
Cow position:
Alignm length: 349
Alignm identity: 244
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 98, 17

Conread position: 282-612
Cow position:
Alignm length: 336
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 169

Conread position: 282-614
Cow position:
Alignm length: 342
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 17

Conread position: 282-614
Cow position:
Alignm length: 346
Alignm identity: 223
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 16, 137

Conread position: 287-598
Cow position:
Alignm length: 323
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 281

Conread position: 292-524
Cow position:
Alignm length: 243
Alignm identity: 187
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 75, 205

Conread position: 292-541
Cow position:
Alignm length: 258
Alignm identity: 179
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 120, 61

Conread position: 292-598
Cow position:
Alignm length: 319
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 235

Conread position: 292-605
Cow position:
Alignm length: 322
Alignm identity: 226
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 123, 62

Conread position: 292-612
Cow position:
Alignm length: 334
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 62

Conread position: 292-612
Cow position:
Alignm length: 331
Alignm identity: 229
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 13, 34

Conread position: 292-612
Cow position:
Alignm length: 340
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 197

Conread position: 292-614
Cow position:
Alignm length: 338
Alignm identity: 238
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 79, 249

Conread position: 292-614
Cow position:
Alignm length: 328
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 86

Conread position: 292-614
Cow position:
Alignm length: 331
Alignm identity: 234
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 88, 180

Conread position: 292-614
Cow position:
Alignm length: 336
Alignm identity: 232
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 120, 51

Conread position: 292-614
Cow position:
Alignm length: 327
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 23

Conread position: 292-614
Cow position:
Alignm length: 326
Alignm identity: 220
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 64, 56

Conread position: 293-538
Cow position:
Alignm length: 252
Alignm identity: 185
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 87, 166

Conread position: 293-614
Cow position:
Alignm length: 323
Alignm identity: 230
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 69, 135

Conread position: 294-601
Cow position:
Alignm length: 321
Alignm identity: 220
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 73, 212

Conread position: 294-614
Cow position:
Alignm length: 329
Alignm identity: 233
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 118, 10

Conread position: 298-507
Cow position:
Alignm length: 224
Alignm identity: 168
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 63, 107

Conread position: 299-601
Cow position:
Alignm length: 313
Alignm identity: 227
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 159, 55

Conread position: 300-614
Cow position:
Alignm length: 321
Alignm identity: 222
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 158, 38

Conread position: 307-521
Cow position:
Alignm length: 222
Alignm identity: 163
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 105, 54

Conread position: 309-613
Cow position:
Alignm length: 321
Alignm identity: 228
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 62, 0

Conread position: 314-611
Cow position:
Alignm length: 306
Alignm identity: 204
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 140, 52

Conread position: 321-439
Cow position:
Alignm length: 125
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 321-612
Cow position:
Alignm length: 306
Alignm identity: 219
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 40, 178

Conread position: 322-595
Cow position:
Alignm length: 286
Alignm identity: 195
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 39, 177

Conread position: 323-538
Cow position:
Alignm length: 225
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 89, 38

Conread position: 324-614
Cow position:
Alignm length: 307
Alignm identity: 221
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 88, 43

Conread position: 336-595
Cow position:
Alignm length: 271
Alignm identity: 189
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 25, 208

Conread position: 336-614
Cow position:
Alignm length: 282
Alignm identity: 199
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 76, 122

Conread position: 348-614
Cow position:
Alignm length: 275
Alignm identity: 199
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 64, 6

Conread position: 349-576
Cow position:
Alignm length: 229
Alignm identity: 164
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 177, 26

Conread position: 363-614
Cow position:
Alignm length: 276
Alignm identity: 190
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 44, 218

Conread position: 363-614
Cow position:
Alignm length: 255
Alignm identity: 175
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 49, 87

Conread position: 367-612
Cow position:
Alignm length: 254
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 134

Conread position: 373-612
Cow position:
Alignm length: 246
Alignm identity: 182
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 91, 160

Conread position: 375-614
Cow position:
Alignm length: 248
Alignm identity: 171
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 77

Conread position: 383-595
Cow position:
Alignm length: 222
Alignm identity: 158
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 99

Conread position: 386-614
Cow position:
Alignm length: 233
Alignm identity: 172
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 27, 73

Conread position: 391-614
Cow position:
Alignm length: 231
Alignm identity: 167
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 21, 110

Conread position: 392-605
Cow position:
Alignm length: 222
Alignm identity: 159
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 20, 142

Conread position: 401-610
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 11, 37

Conread position: 406-612
Cow position:
Alignm length: 213
Alignm identity: 151
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 17

Conread position: 421-614
Cow position:
Alignm length: 201
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 433-614
Cow position:
Alignm length: 189
Alignm identity: 134
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 51, 23

Conread position: 438-610
Cow position:
Alignm length: 183
Alignm identity: 136
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 20, 131

Conread position: 446-605
Cow position:
Alignm length: 163
Alignm identity: 124
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 13, 107

Conread position: 458-614
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 69, 28

Show alignments to all cow chromosomes.