Cow genome map
| Conread name: | rthg11_h16.y1 |
| Conread position: | 156-614 |
| Cow position: | chr18:4672934-4673367 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 307 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 211, 87 |
| Conread position: | 158-562 |
| Cow position: | chr18:33407231-33407629 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 289 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 213, 86 |
| Conread position: | 158-574 |
| Cow position: | chr18:11831750-11832143 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 48 |
| Conread position: | 162-525 |
| Cow position: | chr18:34621751-34621386 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 266 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 143, 87 |
| Conread position: | 170-458 |
| Cow position: | chr18:5646863-5647153 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 214 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 108, 38 |
| Conread position: | 170-598 |
| Cow position: | chr18:37002256-37002679 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 29 |
| Conread position: | 170-610 |
| Cow position: | chr18:12118224-12117790 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 75 |
| Conread position: | 170-611 |
| Cow position: | chr18:17004875-17005320 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 61 |
| Conread position: | 170-614 |
| Cow position: | chr18:22790448-22790025 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 308 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 210, 39 |
| Conread position: | 171-451 |
| Cow position: | chr18:54646113-54646377 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 171-456 |
| Cow position: | chr18:3098691-3098415 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 13, 62 |
| Conread position: | 171-456 |
| Cow position: | chr18:49665535-49665255 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 171-480 |
| Cow position: | chr18:16418071-16417771 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 226 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 190, 78 |
| Conread position: | 171-480 |
| Cow position: | chr18:36445052-36445371 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 66, 51 |
| Conread position: | 171-484 |
| Cow position: | chr18:13172903-13172585 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 49, 39 |
| Conread position: | 171-500 |
| Cow position: | chr18:20998992-20998669 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 125, 74 |
| Conread position: | 171-508 |
| Cow position: | chr18:29387853-29388178 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 40 |
| Conread position: | 171-545 |
| Cow position: | chr18:81385-81745 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 209, 22 |
| Conread position: | 171-552 |
| Cow position: | chr18:6103480-6103095 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 267 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 97, 25 |
| Conread position: | 171-596 |
| Cow position: | chr18:19193723-19193320 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 73 |
| Conread position: | 171-602 |
| Cow position: | chr18:39662399-39662830 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 121 |
| Conread position: | 171-603 |
| Cow position: | chr18:11618104-11618520 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 297 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 176, 74 |
| Conread position: | 171-605 |
| Cow position: | chr18:23447456-23447007 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 319 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 104, 42 |
| Conread position: | 171-610 |
| Cow position: | chr18:36458556-36458990 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 78 |
| Conread position: | 171-611 |
| Cow position: | chr18:3180042-3180471 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 64 |
| Conread position: | 171-611 |
| Cow position: | chr18:5190057-5189633 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 313 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 204, 74 |
| Conread position: | 171-611 |
| Cow position: | chr18:14586854-14586410 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 314 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 164, 74 |
| Conread position: | 171-613 |
| Cow position: | chr18:23766798-23766347 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 22 |
| Conread position: | 171-613 |
| Cow position: | chr18:29796811-29796366 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 122 |
| Conread position: | 171-614 |
| Cow position: | chr18:4540250-4539819 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 74 |
| Conread position: | 171-614 |
| Cow position: | chr18:4796591-4797028 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 311 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 189, 91 |
| Conread position: | 171-614 |
| Cow position: | chr18:9974702-9974265 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 34 |
| Conread position: | 171-614 |
| Cow position: | chr18:12270114-12270564 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 315 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 100, 74 |
| Conread position: | 171-614 |
| Cow position: | chr18:13508104-13507677 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 73 |
| Conread position: | 171-614 |
| Cow position: | chr18:28658286-28657848 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 42 |
| Conread position: | 171-614 |
| Cow position: | chr18:29648411-29648846 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 73 |
| Conread position: | 171-614 |
| Cow position: | chr18:30360498-30360086 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 307 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 105, 74 |
| Conread position: | 171-614 |
| Cow position: | chr18:31672879-31672450 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 310 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 241, 28 |
| Conread position: | 171-614 |
| Cow position: | chr18:33299527-33299967 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 22 |
| Conread position: | 171-614 |
| Cow position: | chr18:34527485-34527032 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 53 |
| Conread position: | 171-614 |
| Cow position: | chr18:44262240-44262693 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 75 |
| Conread position: | 171-614 |
| Cow position: | chr18:45904269-45903834 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 33 |
| Conread position: | 171-614 |
| Cow position: | chr18:47511616-47512069 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 74 |
| Conread position: | 171-614 |
| Cow position: | chr18:55119496-55119938 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 78 |
| Conread position: | 171-614 |
| Cow position: | chr18:55505026-55505467 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 315 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 94, 73 |
| Conread position: | 172-538 |
| Cow position: | chr18:52632795-52632419 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 72 |
| Conread position: | 172-611 |
| Cow position: | chr18:19273493-19273036 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 75 |
| Conread position: | 172-614 |
| Cow position: | chr18:11866979-11867403 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 22 |
| Conread position: | 173-535 |
| Cow position: | chr18:17380209-17380552 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 264 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 228, 50 |
| Conread position: | 173-557 |
| Cow position: | chr18:56361976-56361596 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 53 |
| Conread position: | 173-590 |
| Cow position: | chr18:39002171-39001768 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 286 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 240, 70 |
| Conread position: | 173-612 |
| Cow position: | chr18:20174506-20174068 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 76 |
| Conread position: | 173-614 |
| Cow position: | chr18:9365514-9365984 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 414 |
| Conread position: | 173-614 |
| Cow position: | chr18:37023932-37023487 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 307 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 124, 72 |
| Conread position: | 173-614 |
| Cow position: | chr18:50082612-50082194 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 31 |
| Conread position: | 174-605 |
| Cow position: | chr18:33793329-33793744 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 71 |
| Conread position: | 174-612 |
| Cow position: | chr18:2849636-2849208 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 297 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 94, 71 |
| Conread position: | 174-614 |
| Cow position: | chr18:9066342-9066765 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 295 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 33, 75 |
| Conread position: | 175-614 |
| Cow position: | chr18:29357011-29356561 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 48 |
| Conread position: | 177-611 |
| Cow position: | chr18:22121252-22120825 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 66 |
| Conread position: | 177-614 |
| Cow position: | chr18:10575740-10576174 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 68 |
| Conread position: | 177-614 |
| Cow position: | chr18:12241903-12242337 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 100 |
| Conread position: | 178-613 |
| Cow position: | chr18:38686725-38687142 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 294 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 46, 37 |
| Conread position: | 179-612 |
| Cow position: | chr18:4182556-4182127 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 306 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 70, 25 |
| Conread position: | 180-524 |
| Cow position: | chr18:47314667-47314307 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 254 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 179, 108 |
| Conread position: | 181-614 |
| Cow position: | chr18:55782794-55782367 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 64 |
| Conread position: | 184-443 |
| Cow position: | chr18:45395628-45395896 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 112, 81 |
| Conread position: | 188-584 |
| Cow position: | chr18:51826930-51827314 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 88, 61 |
| Conread position: | 192-614 |
| Cow position: | chr18:18592098-18592536 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 306 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 56, 123 |
| Conread position: | 218-462 |
| Cow position: | chr18:11233100-11233343 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 141, 27 |
| Conread position: | 219-593 |
| Cow position: | chr18:24956966-24957340 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 255 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 43, 54 |
| Conread position: | 220-614 |
| Cow position: | chr18:44802212-44801826 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 25 |
| Conread position: | 223-576 |
| Cow position: | chr18:8105269-8104914 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 50 |
| Conread position: | 233-444 |
| Cow position: | chr18:1733507-1733302 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 179, 12 |
| Conread position: | 240-510 |
| Cow position: | chr18:26286588-26286871 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 19, 256 |
| Conread position: | 247-614 |
| Cow position: | chr18:6309774-6310145 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 263 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 29, 23 |
| Conread position: | 248-614 |
| Cow position: | chr18:4884821-4884457 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 263 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 6, 44 |
| Conread position: | 249-611 |
| Cow position: | chr18:13359746-13360114 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 273 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 9, 81 |
| Conread position: | 252-552 |
| Cow position: | chr18:44549208-44548910 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 24, 18 |
| Conread position: | 252-614 |
| Cow position: | chr18:46048452-46048815 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 151 |
| Conread position: | 253-600 |
| Cow position: | chr18:46727293-46727638 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 17 |
| Conread position: | 263-614 |
| Cow position: | chr18:23476967-23476624 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 30, 8 |
| Conread position: | 265-444 |
| Cow position: | chr18:54513841-54514019 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 97 |
| Conread position: | 265-460 |
| Cow position: | chr18:4858206-4857996 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 10 |
| Conread position: | 277-614 |
| Cow position: | chr18:15614130-15613797 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 82 |
| Conread position: | 282-591 |
| Cow position: | chr18:3115183-3115493 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 14, 187 |
| Conread position: | 282-611 |
| Cow position: | chr18:55498789-55499131 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 244 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 98, 17 |
| Conread position: | 282-612 |
| Cow position: | chr18:11684713-11685043 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 169 |
| Conread position: | 282-614 |
| Cow position: | chr18:55001016-55000679 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 17 |
| Conread position: | 282-614 |
| Cow position: | chr18:56165706-56166044 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 16, 137 |
| Conread position: | 287-598 |
| Cow position: | chr18:11691682-11691362 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 281 |
| Conread position: | 292-524 |
| Cow position: | chr18:11166714-11166954 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 187 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 75, 205 |
| Conread position: | 292-541 |
| Cow position: | chr18:4649000-4648751 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 120, 61 |
| Conread position: | 292-598 |
| Cow position: | chr18:25206457-25206141 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 235 |
| Conread position: | 292-605 |
| Cow position: | chr18:5766164-5766463 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 123, 62 |
| Conread position: | 292-612 |
| Cow position: | chr18:6610122-6609797 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 62 |
| Conread position: | 292-612 |
| Cow position: | chr18:21103024-21102715 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 229 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 292-612 |
| Cow position: | chr18:38985422-38985760 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 197 |
| Conread position: | 292-614 |
| Cow position: | chr18:2592438-2592105 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 238 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 79, 249 |
| Conread position: | 292-614 |
| Cow position: | chr18:20641750-20641433 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 86 |
| Conread position: | 292-614 |
| Cow position: | chr18:21768362-21768677 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 88, 180 |
| Conread position: | 292-614 |
| Cow position: | chr18:22214222-22214551 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 120, 51 |
| Conread position: | 292-614 |
| Cow position: | chr18:28924096-28923784 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 23 |
| Conread position: | 292-614 |
| Cow position: | chr18:33158698-33159005 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 64, 56 |
| Conread position: | 293-538 |
| Cow position: | chr18:48453429-48453676 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 87, 166 |
| Conread position: | 293-614 |
| Cow position: | chr18:12058753-12059060 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 230 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 69, 135 |
| Conread position: | 294-601 |
| Cow position: | chr18:20271283-20270964 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 73, 212 |
| Conread position: | 294-614 |
| Cow position: | chr18:48713292-48713614 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 233 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 118, 10 |
| Conread position: | 298-507 |
| Cow position: | chr18:8164299-8164077 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 63, 107 |
| Conread position: | 299-601 |
| Cow position: | chr18:22056112-22055824 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 159, 55 |
| Conread position: | 300-614 |
| Cow position: | chr18:36230968-36230663 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 158, 38 |
| Conread position: | 307-521 |
| Cow position: | chr18:21205116-21205334 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 105, 54 |
| Conread position: | 309-613 |
| Cow position: | chr18:33007808-33008128 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 228 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 314-611 |
| Cow position: | chr18:52854822-52855115 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 140, 52 |
| Conread position: | 321-439 |
| Cow position: | chr18:33882894-33882770 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 321-612 |
| Cow position: | chr18:42479828-42479525 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 219 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 40, 178 |
| Conread position: | 322-595 |
| Cow position: | chr18:25984808-25984527 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 39, 177 |
| Conread position: | 323-538 |
| Cow position: | chr18:15340674-15340456 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 89, 38 |
| Conread position: | 324-614 |
| Cow position: | chr18:33896656-33896355 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 88, 43 |
| Conread position: | 336-595 |
| Cow position: | chr18:39434602-39434869 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 25, 208 |
| Conread position: | 336-614 |
| Cow position: | chr18:42431826-42431548 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 76, 122 |
| Conread position: | 348-614 |
| Cow position: | chr18:1954794-1954526 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 64, 6 |
| Conread position: | 349-576 |
| Cow position: | chr18:19887780-19887556 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 177, 26 |
| Conread position: | 363-614 |
| Cow position: | chr18:48451860-48452134 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 44, 218 |
| Conread position: | 363-614 |
| Cow position: | chr18:54111027-54111271 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 49, 87 |
| Conread position: | 367-612 |
| Cow position: | chr18:16686525-16686274 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 134 |
| Conread position: | 373-612 |
| Cow position: | chr18:36201808-36201568 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 91, 160 |
| Conread position: | 375-614 |
| Cow position: | chr18:28930810-28930573 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 37, 77 |
| Conread position: | 383-595 |
| Cow position: | chr18:50974468-50974250 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 29, 99 |
| Conread position: | 386-614 |
| Cow position: | chr18:48633623-48633839 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 27, 73 |
| Conread position: | 391-614 |
| Cow position: | chr18:1571401-1571174 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 21, 110 |
| Conread position: | 392-605 |
| Cow position: | chr18:3370735-3370954 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 20, 142 |
| Conread position: | 401-610 |
| Cow position: | chr18:51594956-51594745 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 11, 37 |
| Conread position: | 406-612 |
| Cow position: | chr18:49038314-49038523 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 23, 17 |
| Conread position: | 421-614 |
| Cow position: | chr18:31711698-31711498 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 433-614 |
| Cow position: | chr18:20798205-20798391 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 51, 23 |
| Conread position: | 438-610 |
| Cow position: | chr18:2146701-2146520 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 20, 131 |
| Conread position: | 446-605 |
| Cow position: | chr18:49015022-49015179 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 13, 107 |
| Conread position: | 458-614 |
| Cow position: | chr18:43797044-43796892 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 69, 28 |
Show alignments to all cow chromosomes.