Cow genome map

Conread name: rthg11_h16.y1

Conread position: 161-520
Cow position: chr21:21216433-21216075 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 254
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 206, 84

Conread position: 162-456
Cow position: chr21:363364-363649 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 199
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 172, 83

Conread position: 162-600
Cow position: chr21:36297188-36297639 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 90

Conread position: 163-560
Cow position: chr21:2904752-2904372 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 82

Conread position: 164-594
Cow position: chr21:937763-938159 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 286
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 230, 78

Conread position: 166-613
Cow position: chr21:28734199-28733754 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 79

Conread position: 168-614
Cow position: chr21:4399515-4399963 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 75

Conread position: 170-602
Cow position: chr21:30607386-30606938 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 216

Conread position: 170-614
Cow position: chr21:25382715-25383186 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 323
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 58, 50

Conread position: 170-614
Cow position: chr21:29069611-29069166 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 79

Conread position: 171-444
Cow position: chr21:33419998-33419734 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 204
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 49, 75

Conread position: 171-450
Cow position: chr21:4905249-4904973 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 207
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 46, 54

Conread position: 171-463
Cow position: chr21:7564604-7564311 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 125, 73

Conread position: 171-499
Cow position: chr21:4189550-4189879 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 227
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 58, 76

Conread position: 171-506
Cow position: chr21:12616860-12617191 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 49

Conread position: 171-513
Cow position: chr21:42914028-42913684 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 74

Conread position: 171-515
Cow position: chr21:28881867-28882198 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 244
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 231, 78

Conread position: 171-521
Cow position: chr21:45866656-45867001 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 247
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 127, 17

Conread position: 171-531
Cow position: chr21:32535697-32536055 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 262
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 125, 7

Conread position: 171-538
Cow position: chr21:3236250-3236611 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 268
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 91, 104

Conread position: 171-538
Cow position: chr21:20925787-20925420 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 34

Conread position: 171-540
Cow position: chr21:12961195-12960810 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 124

Conread position: 171-541
Cow position: chr21:47802544-47802173 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 78

Conread position: 171-557
Cow position: chr21:36756333-36756704 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 264
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 235, 44

Conread position: 171-576
Cow position: chr21:10726999-10727399 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 74

Conread position: 171-591
Cow position: chr21:46912262-46912682 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 295
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 125, 74

Conread position: 171-592
Cow position: chr21:45151913-45151491 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 287
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 125, 95

Conread position: 171-593
Cow position: chr21:725172-724746 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 89

Conread position: 171-593
Cow position: chr21:30231982-30231555 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 297
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 190, 73

Conread position: 171-594
Cow position: chr21:44514983-44515404 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 123

Conread position: 171-595
Cow position: chr21:39401318-39401731 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 74

Conread position: 171-598
Cow position: chr21:18828619-18828158 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 424

Conread position: 171-602
Cow position: chr21:6833770-6834197 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 300
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 51, 57

Conread position: 171-604
Cow position: chr21:25344596-25345011 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 289
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 126, 74

Conread position: 171-605
Cow position: chr21:81788-82218 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 102

Conread position: 171-608
Cow position: chr21:7672851-7673275 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 74

Conread position: 171-611
Cow position: chr21:4998767-4998338 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 74

Conread position: 171-611
Cow position: chr21:27863801-27863356 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 74

Conread position: 171-612
Cow position: chr21:395596-396025 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 74

Conread position: 171-612
Cow position: chr21:11645267-11644808 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 398

Conread position: 171-613
Cow position: chr21:33983092-33982651 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 73

Conread position: 171-613
Cow position: chr21:37299183-37299621 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 74

Conread position: 171-614
Cow position: chr21:643055-643484 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 74

Conread position: 171-614
Cow position: chr21:5392820-5392375 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 75

Conread position: 171-614
Cow position: chr21:5566709-5567146 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 312
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 105, 73

Conread position: 171-614
Cow position: chr21:7582187-7581745 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 74

Conread position: 171-614
Cow position: chr21:13089759-13089315 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 296
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 78, 17

Conread position: 171-614
Cow position: chr21:20160402-20160836 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 74

Conread position: 171-614
Cow position: chr21:31691199-31691642 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 107

Conread position: 171-614
Cow position: chr21:34653805-34654233 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 32

Conread position: 171-614
Cow position: chr21:38120821-38121261 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 118

Conread position: 171-614
Cow position: chr21:44565987-44565562 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 298
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 105, 85

Conread position: 171-614
Cow position: chr21:45971437-45971015 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 302
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 287, 42

Conread position: 172-525
Cow position: chr21:27743460-27743820 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 258
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 208, 79

Conread position: 172-586
Cow position: chr21:33997506-33997095 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 277
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 240, 85

Conread position: 172-595
Cow position: chr21:4276887-4276462 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 288
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 82, 34

Conread position: 172-596
Cow position: chr21:32237019-32237421 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 291
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 90, 70

Conread position: 172-612
Cow position: chr21:42384227-42384666 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 306
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 183, 72

Conread position: 172-614
Cow position: chr21:23672465-23672905 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 313
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 182, 88

Conread position: 172-614
Cow position: chr21:30990549-30990127 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 77

Conread position: 173-452
Cow position: chr21:4080074-4080354 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 210
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 123, 70

Conread position: 173-562
Cow position: chr21:20262614-20262226 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 72

Conread position: 173-605
Cow position: chr21:2679279-2679700 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 66

Conread position: 173-605
Cow position: chr21:42540500-42540071 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 72

Conread position: 173-612
Cow position: chr21:5898676-5898244 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 296
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 8, 43

Conread position: 173-614
Cow position: chr21:641304-641747 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 72

Conread position: 174-530
Cow position: chr21:2786071-2785699 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 260
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 75, 71

Conread position: 174-604
Cow position: chr21:47760498-47760918 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 294
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 187, 69

Conread position: 174-613
Cow position: chr21:33562735-33563162 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 84

Conread position: 176-524
Cow position: chr21:21480456-21480114 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 69

Conread position: 176-602
Cow position: chr21:43357538-43357108 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 73

Conread position: 176-614
Cow position: chr21:17643240-17642825 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 309
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 174, 69

Conread position: 180-598
Cow position: chr21:16188068-16187663 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 39

Conread position: 189-614
Cow position: chr21:33350481-33350901 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 55

Conread position: 193-604
Cow position: chr21:44252088-44251693 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 284
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 103, 52

Conread position: 193-614
Cow position: chr21:3585616-3585208 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 52

Conread position: 204-613
Cow position: chr21:6713787-6713364 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 283
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 58, 69

Conread position: 204-614
Cow position: chr21:39403787-39403365 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 290
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 92, 36

Conread position: 209-614
Cow position: chr21:26244683-26245074 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 280
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 57, 36

Conread position: 213-474
Cow position: chr21:28907892-28907642 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 192
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 80, 52

Conread position: 219-480
Cow position: chr21:15445313-15445045 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 161, 29

Conread position: 219-614
Cow position: chr21:27569398-27569013 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 54

Conread position: 220-606
Cow position: chr21:42348911-42348543 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 25

Conread position: 223-460
Cow position: chr21:9278138-9278384 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 155, 65

Conread position: 226-611
Cow position: chr21:27521565-27521183 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 270
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 40, 17

Conread position: 243-614
Cow position: chr21:47465330-47464959 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 31

Conread position: 250-614
Cow position: chr21:33727670-33727299 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 248
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 46, 25

Conread position: 253-611
Cow position: chr21:14452015-14452391 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 259
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 13, 243

Conread position: 254-497
Cow position: chr21:48108070-48107820 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 22, 14

Conread position: 254-611
Cow position: chr21:33510-33876 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 259
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 27, 12

Conread position: 254-614
Cow position: chr21:9990305-9990670 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 13

Conread position: 258-603
Cow position: chr21:5426737-5427089 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 106

Conread position: 260-547
Cow position: chr21:39450373-39450065 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 210
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 264-613
Cow position: chr21:24642320-24642681 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 252
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 15, 37

Conread position: 265-612
Cow position: chr21:32339932-32339582 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 17

Conread position: 265-614
Cow position: chr21:44826079-44825726 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 33

Conread position: 273-614
Cow position: chr21:30592493-30592149 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 261

Conread position: 279-614
Cow position: chr21:28989431-28989773 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 232
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 86, 13

Conread position: 281-605
Cow position: chr21:15610973-15611291 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 239
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 84, 18

Conread position: 282-484
Cow position: chr21:13850252-13850033 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 47

Conread position: 282-521
Cow position: chr21:31676317-31676566 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 182
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 14, 63

Conread position: 282-559
Cow position: chr21:35569565-35569276 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 219
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 48, 14

Conread position: 282-605
Cow position: chr21:42841772-42841446 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 233
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 126, 96

Conread position: 282-614
Cow position: chr21:28626060-28626397 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 38

Conread position: 283-460
Cow position: chr21:13163713-13163894 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 97, 13

Conread position: 288-593
Cow position: chr21:41198586-41198260 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 226
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 8, 284

Conread position: 292-456
Cow position: chr21:5636890-5636719 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 292-478
Cow position: chr21:31277652-31277846 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 75, 26

Conread position: 292-496
Cow position: chr21:22353399-22353192 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 83, 23

Conread position: 292-514
Cow position: chr21:18494796-18495030 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 69, 221

Conread position: 292-538
Cow position: chr21:17174973-17175232 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 15, 208

Conread position: 292-595
Cow position: chr21:17428334-17428637 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 207
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 83, 23

Conread position: 292-602
Cow position: chr21:38449621-38449301 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 231
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 63, 95

Conread position: 292-605
Cow position: chr21:27146161-27145842 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 218
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 87, 188

Conread position: 292-612
Cow position: chr21:8235714-8235404 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 223
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 75, 92

Conread position: 292-612
Cow position: chr21:17193929-17193591 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 231
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 75, 206

Conread position: 292-612
Cow position: chr21:45330777-45330449 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 244
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 69, 211

Conread position: 292-614
Cow position: chr21:802463-802157 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 63

Conread position: 292-614
Cow position: chr21:13365175-13365502 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 75

Conread position: 292-614
Cow position: chr21:15911231-15911560 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 273

Conread position: 292-614
Cow position: chr21:17183753-17184077 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 234
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 68, 24

Conread position: 292-614
Cow position: chr21:18842407-18842077 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 173

Conread position: 292-614
Cow position: chr21:19258657-19258978 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 176

Conread position: 292-614
Cow position: chr21:21169664-21169336 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 241
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 73, 63

Conread position: 292-614
Cow position: chr21:32559523-32559205 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 239
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 67, 63

Conread position: 292-614
Cow position: chr21:45330110-45329790 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 228
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 114, 35

Conread position: 292-614
Cow position: chr21:45473926-45473598 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 227
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 72, 202

Conread position: 292-614
Cow position: chr21:47764282-47763958 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 233
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 70, 90

Conread position: 293-453
Cow position: chr21:34658866-34659030 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 74, 96

Conread position: 293-587
Cow position: chr21:46860270-46859989 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 211
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 78, 47

Conread position: 293-611
Cow position: chr21:10000912-10001232 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 43

Conread position: 300-521
Cow position: chr21:28617429-28617658 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 67, 27

Conread position: 300-614
Cow position: chr21:8125962-8125645 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 219
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 39

Conread position: 301-521
Cow position: chr21:42190329-42190104 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 113, 54

Conread position: 302-614
Cow position: chr21:41590716-41590405 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 223
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 110, 78

Conread position: 303-584
Cow position: chr21:13840164-13840456 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 207
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 64, 38

Conread position: 304-606
Cow position: chr21:18800686-18800382 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 164

Conread position: 317-594
Cow position: chr21:7825320-7825052 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 193
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 62, 178

Conread position: 318-614
Cow position: chr21:42007603-42007302 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 213
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 88, 43

Conread position: 323-612
Cow position: chr21:12462109-12461808 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 249

Conread position: 324-605
Cow position: chr21:20152810-20153107 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 208
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 47, 243

Conread position: 325-591
Cow position: chr21:17875332-17875056 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 188
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 176

Conread position: 325-614
Cow position: chr21:12723020-12723311 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 55, 116

Conread position: 326-580
Cow position: chr21:17856408-17856670 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 190
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 35, 89

Conread position: 326-598
Cow position: chr21:20260456-20260175 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 206
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 40, 178

Conread position: 326-614
Cow position: chr21:20418825-20418522 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 207
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 19, 240

Conread position: 334-605
Cow position: chr21:46911-47191 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 191
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 46, 226

Conread position: 335-614
Cow position: chr21:27810278-27810547 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 212
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 40, 154

Conread position: 339-614
Cow position: chr21:30222219-30222505 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 207
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 41, 109

Conread position: 342-614
Cow position: chr21:30835245-30835523 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 196
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 65, 193

Conread position: 346-580
Cow position: chr21:38664525-38664765 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 8, 18

Conread position: 346-614
Cow position: chr21:2657704-2657968 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 185
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 21, 104

Conread position: 363-602
Cow position: chr21:23980278-23980034 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 164
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 49, 105

Conread position: 363-614
Cow position: chr21:30250286-30250044 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 54, 95

Conread position: 383-614
Cow position: chr21:44214048-44214286 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 29, 180

Conread position: 386-614
Cow position: chr21:4280745-4280515 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 26, 57

Conread position: 387-611
Cow position: chr21:40266049-40266278 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 22, 109

Conread position: 388-612
Cow position: chr21:45262883-45262652 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 175
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 24, 190

Conread position: 394-614
Cow position: chr21:47363802-47363574 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 172

Conread position: 399-614
Cow position: chr21:8426381-8426606 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 18, 101

Conread position: 403-598
Cow position: chr21:829258-829064 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 30

Conread position: 413-614
Cow position: chr21:22014143-22014350 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 49, 110

Conread position: 415-614
Cow position: chr21:868967-868764 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 150

Conread position: 420-614
Cow position: chr21:29014597-29014399 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 89

Conread position: 430-605
Cow position: chr21:12104343-12104517 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 6, 25

Conread position: 434-614
Cow position: chr21:71565-71746 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 62

Conread position: 447-614
Cow position: chr21:20183067-20183231 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 80, 9

Conread position: 461-614
Cow position: chr21:36682330-36682485 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 20, 92

Conread position: 463-614
Cow position: chr21:19360166-19360016 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 13

Conread position: 463-614
Cow position: chr21:19868946-19868795 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 43

Conread position: 479-614
Cow position: chr21:20163734-20163868 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 9

Show alignments to all cow chromosomes.