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Cow genome map

           
Conread name:
           
rthg11_h16.y1
        

               
Conread position:
               
162-581
               

               
Cow position:
               
chr22:26097968-26097560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
62, 51
               

               
Conread position:
               
164-560
               

               
Cow position:
               
chr22:3960652-3960244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 92
               

               
Conread position:
               
164-614
               

               
Cow position:
               
chr22:10568040-10567621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 79
               

               
Conread position:
               
166-611
               

               
Cow position:
               
chr22:8733674-8733247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
23, 79
               

               
Conread position:
               
166-614
               

               
Cow position:
               
chr22:21296077-21295632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 79
               

               
Conread position:
               
168-614
               

               
Cow position:
               
chr22:15568393-15567923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 26
               

               
Conread position:
               
168-614
               

               
Cow position:
               
chr22:17950305-17949879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 58
               

               
Conread position:
               
170-486
               

               
Cow position:
               
chr22:30472697-30473014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
197, 15
               

               
Conread position:
               
170-562
               

               
Cow position:
               
chr22:13011626-13011226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 18
               

               
Conread position:
               
170-614
               

               
Cow position:
               
chr22:10631025-10631481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 75
               

               
Conread position:
               
171-408
               

               
Cow position:
               
chr22:1591905-1592154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
171-442
               

               
Cow position:
               
chr22:8357265-8357532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
125, 74
               

               
Conread position:
               
171-456
               

               
Cow position:
               
chr22:42933836-42933554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
105, 22
               

               
Conread position:
               
171-459
               

               
Cow position:
               
chr22:35533726-35533425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
78, 180
               

               
Conread position:
               
171-483
               

               
Cow position:
               
chr22:30954690-30954996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 101
               

               
Conread position:
               
171-499
               

               
Cow position:
               
chr22:4631658-4631980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
125, 42
               

               
Conread position:
               
171-506
               

               
Cow position:
               
chr22:1342393-1342722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
202, 73
               

               
Conread position:
               
171-520
               

               
Cow position:
               
chr22:39472725-39472377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 74
               

               
Conread position:
               
171-521
               

               
Cow position:
               
chr22:41045263-41044909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
251, 74
               

               
Conread position:
               
171-546
               

               
Cow position:
               
chr22:13950829-13951205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 42
               

               
Conread position:
               
171-577
               

               
Cow position:
               
chr22:4043588-4043989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 38
               

               
Conread position:
               
171-592
               

               
Cow position:
               
chr22:15068063-15068498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
171-598
               

               
Cow position:
               
chr22:4645429-4645849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 44
               

               
Conread position:
               
171-598
               

               
Cow position:
               
chr22:25743316-25742872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 75
               

               
Conread position:
               
171-602
               

               
Cow position:
               
chr22:1310076-1309653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
188, 74
               

               
Conread position:
               
171-602
               

               
Cow position:
               
chr22:5282159-5282578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
105, 74
               

               
Conread position:
               
171-605
               

               
Cow position:
               
chr22:1266288-1265840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
53, 44
               

               
Conread position:
               
171-605
               

               
Cow position:
               
chr22:30514906-30515341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 70
               

               
Conread position:
               
171-605
               

               
Cow position:
               
chr22:38940297-38939857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
83, 69
               

               
Conread position:
               
171-610
               

               
Cow position:
               
chr22:34476348-34475911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
237, 17
               

               
Conread position:
               
171-611
               

               
Cow position:
               
chr22:877174-877605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
155, 74
               

               
Conread position:
               
171-612
               

               
Cow position:
               
chr22:4535672-4535238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
126, 73
               

               
Conread position:
               
171-612
               

               
Cow position:
               
chr22:27171605-27171170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 50
               

               
Conread position:
               
171-612
               

               
Cow position:
               
chr22:38439501-38439066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 28
               

               
Conread position:
               
171-612
               

               
Cow position:
               
chr22:45513869-45513438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
196, 85
               

               
Conread position:
               
171-613
               

               
Cow position:
               
chr22:8412175-8412620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 74
               

               
Conread position:
               
171-613
               

               
Cow position:
               
chr22:10937181-10936759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
90, 42
               

               
Conread position:
               
171-613
               

               
Cow position:
               
chr22:17152331-17152769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 18
               

               
Conread position:
               
171-614
               

               
Cow position:
               
chr22:864869-864422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 82
               

               
Conread position:
               
171-614
               

               
Cow position:
               
chr22:2623894-2623426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 212
               

               
Conread position:
               
171-614
               

               
Cow position:
               
chr22:4017127-4017566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 34
               

               
Conread position:
               
171-614
               

               
Cow position:
               
chr22:4562998-4563456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 78
               

               
Conread position:
               
171-614
               

               
Cow position:
               
chr22:9127045-9127501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 81
               

               
Conread position:
               
171-614
               

               
Cow position:
               
chr22:10122040-10122472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 74
               

               
Conread position:
               
171-614
               

               
Cow position:
               
chr22:10339473-10339026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 78
               

               
Conread position:
               
171-614
               

               
Cow position:
               
chr22:11130527-11130963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 44
               

               
Conread position:
               
171-614
               

               
Cow position:
               
chr22:12572850-12573297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
47, 53
               

               
Conread position:
               
171-614
               

               
Cow position:
               
chr22:13957994-13957551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 32
               

               
Conread position:
               
171-614
               

               
Cow position:
               
chr22:14925069-14924639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
239, 50
               

               
Conread position:
               
171-614
               

               
Cow position:
               
chr22:17813888-17814325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 50
               

               
Conread position:
               
171-614
               

               
Cow position:
               
chr22:18258879-18259311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 74
               

               
Conread position:
               
171-614
               

               
Cow position:
               
chr22:18926005-18926448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 101
               

               
Conread position:
               
171-614
               

               
Cow position:
               
chr22:26184509-26184068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 74
               

               
Conread position:
               
171-614
               

               
Cow position:
               
chr22:34441995-34441537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 125
               

               
Conread position:
               
171-614
               

               
Cow position:
               
chr22:36540024-36539560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
109, 72
               

               
Conread position:
               
171-614
               

               
Cow position:
               
chr22:39508380-39507948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
54, 65
               

               
Conread position:
               
171-614
               

               
Cow position:
               
chr22:41971502-41971061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 83
               

               
Conread position:
               
171-614
               

               
Cow position:
               
chr22:44740757-44741169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 104
               

               
Conread position:
               
172-451
               

               
Cow position:
               
chr22:11987562-11987287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 77
               

               
Conread position:
               
172-456
               

               
Cow position:
               
chr22:25658883-25658602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
124, 77
               

               
Conread position:
               
172-459
               

               
Cow position:
               
chr22:34931101-34930809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
74, 116
               

               
Conread position:
               
172-502
               

               
Cow position:
               
chr22:35903068-35902719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
39, 207
               

               
Conread position:
               
172-602
               

               
Cow position:
               
chr22:33448434-33448000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 48
               

               
Conread position:
               
172-602
               

               
Cow position:
               
chr22:34712373-34712807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
195, 78
               

               
Conread position:
               
172-608
               

               
Cow position:
               
chr22:21502389-21502832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 21
               

               
Conread position:
               
172-612
               

               
Cow position:
               
chr22:2216454-2216900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 334
               

               
Conread position:
               
172-612
               

               
Cow position:
               
chr22:23176807-23176350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 108
               

               
Conread position:
               
172-613
               

               
Cow position:
               
chr22:16620831-16621268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
234, 79
               

               
Conread position:
               
172-613
               

               
Cow position:
               
chr22:30483571-30484007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 39
               

               
Conread position:
               
172-614
               

               
Cow position:
               
chr22:14366301-14365865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 6
               

               
Conread position:
               
172-614
               

               
Cow position:
               
chr22:18837909-18838349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
208, 92
               

               
Conread position:
               
172-614
               

               
Cow position:
               
chr22:40374258-40374701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 73
               

               
Conread position:
               
173-471
               

               
Cow position:
               
chr22:31513454-31513139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 71
               

               
Conread position:
               
173-533
               

               
Cow position:
               
chr22:1974507-1974136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
43, 86
               

               
Conread position:
               
173-581
               

               
Cow position:
               
chr22:21567657-21568057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
18, 42
               

               
Conread position:
               
173-591
               

               
Cow position:
               
chr22:7838258-7838660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
242, 72
               

               
Conread position:
               
173-591
               

               
Cow position:
               
chr22:16273287-16273710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
202, 72
               

               
Conread position:
               
173-598
               

               
Cow position:
               
chr22:10532149-10532577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 72
               

               
Conread position:
               
173-605
               

               
Cow position:
               
chr22:16044776-16044332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 100
               

               
Conread position:
               
173-610
               

               
Cow position:
               
chr22:22160374-22160815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 52
               

               
Conread position:
               
173-611
               

               
Cow position:
               
chr22:24611423-24611004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 72
               

               
Conread position:
               
173-612
               

               
Cow position:
               
chr22:3842280-3842708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
196, 31
               

               
Conread position:
               
173-614
               

               
Cow position:
               
chr22:590001-590432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 75
               

               
Conread position:
               
173-614
               

               
Cow position:
               
chr22:1279733-1279293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 72
               

               
Conread position:
               
173-614
               

               
Cow position:
               
chr22:4356760-4357183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
202, 38
               

               
Conread position:
               
173-614
               

               
Cow position:
               
chr22:11613081-11613517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 72
               

               
Conread position:
               
173-614
               

               
Cow position:
               
chr22:15039532-15039089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 42
               

               
Conread position:
               
173-614
               

               
Cow position:
               
chr22:21890706-21890267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 78
               

               
Conread position:
               
173-614
               

               
Cow position:
               
chr22:28071210-28071651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 53
               

               
Conread position:
               
173-614
               

               
Cow position:
               
chr22:31646147-31646585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 72
               

               
Conread position:
               
173-614
               

               
Cow position:
               
chr22:40348999-40349436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 76
               

               
Conread position:
               
174-611
               

               
Cow position:
               
chr22:9335629-9335195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
280, 71
               

               
Conread position:
               
175-611
               

               
Cow position:
               
chr22:23856704-23857136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 10
               

               
Conread position:
               
175-614
               

               
Cow position:
               
chr22:1289852-1289436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
200, 69
               

               
Conread position:
               
175-614
               

               
Cow position:
               
chr22:6721409-6720988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 70
               

               
Conread position:
               
190-611
               

               
Cow position:
               
chr22:34398785-34398366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 55
               

               
Conread position:
               
190-614
               

               
Cow position:
               
chr22:43397689-43398095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 55
               

               
Conread position:
               
193-611
               

               
Cow position:
               
chr22:22861238-22860822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
101, 52
               

               
Conread position:
               
193-614
               

               
Cow position:
               
chr22:27329212-27328800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
90, 39
               

               
Conread position:
               
195-614
               

               
Cow position:
               
chr22:33485929-33485526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
42, 55
               

               
Conread position:
               
224-529
               

               
Cow position:
               
chr22:1601880-1602197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
18, 28
               

               
Conread position:
               
231-614
               

               
Cow position:
               
chr22:3316840-3317213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 14
               

               
Conread position:
               
231-614
               

               
Cow position:
               
chr22:30049865-30049473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 18
               

               
Conread position:
               
244-521
               

               
Cow position:
               
chr22:27550068-27550357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
17, 71
               

               
Conread position:
               
248-500
               

               
Cow position:
               
chr22:7979426-7979684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
30, 76
               

               
Conread position:
               
248-614
               

               
Cow position:
               
chr22:6493884-6494254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 198
               

               
Conread position:
               
265-614
               

               
Cow position:
               
chr22:9520882-9521237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
27, 10
               

               
Conread position:
               
277-584
               

               
Cow position:
               
chr22:14245676-14245381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
136, 84
               

               
Conread position:
               
282-460
               

               
Cow position:
               
chr22:6204542-6204358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
14, 105
               

               
Conread position:
               
282-507
               

               
Cow position:
               
chr22:3253184-3252967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
128, 71
               

               
Conread position:
               
282-610
               

               
Cow position:
               
chr22:26339511-26339843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 86
               

               
Conread position:
               
282-611
               

               
Cow position:
               
chr22:17852870-17852546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 138
               

               
Conread position:
               
282-612
               

               
Cow position:
               
chr22:24066483-24066142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 151
               

               
Conread position:
               
282-612
               

               
Cow position:
               
chr22:28058289-28057959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
87, 34
               

               
Conread position:
               
282-612
               

               
Cow position:
               
chr22:28640400-28640060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
20, 31
               

               
Conread position:
               
282-614
               

               
Cow position:
               
chr22:37324299-37324635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
13, 33
               

               
Conread position:
               
287-581
               

               
Cow position:
               
chr22:29013635-29013940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
6, 200
               

               
Conread position:
               
291-612
               

               
Cow position:
               
chr22:47555608-47555939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 9
               

               
Conread position:
               
292-452
               

               
Cow position:
               
chr22:4163794-4163944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
292-456
               

               
Cow position:
               
chr22:19376474-19376640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
58, 70
               

               
Conread position:
               
292-456
               

               
Cow position:
               
chr22:44386634-44386474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
123, 22
               

               
Conread position:
               
292-485
               

               
Cow position:
               
chr22:14601278-14601470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
118, 62
               

               
Conread position:
               
292-501
               

               
Cow position:
               
chr22:2141578-2141791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
75, 173
               

               
Conread position:
               
292-513
               

               
Cow position:
               
chr22:25341784-25342009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
75, 203
               

               
Conread position:
               
292-588
               

               
Cow position:
               
chr22:19653217-19652916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
75, 14
               

               
Conread position:
               
292-595
               

               
Cow position:
               
chr22:4583335-4583636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
104, 34
               

               
Conread position:
               
292-595
               

               
Cow position:
               
chr22:35753542-35753235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
58, 45
               

               
Conread position:
               
292-602
               

               
Cow position:
               
chr22:7851723-7852045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
79, 196
               

               
Conread position:
               
292-605
               

               
Cow position:
               
chr22:25714774-25715089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
75, 135
               

               
Conread position:
               
292-610
               

               
Cow position:
               
chr22:31593097-31592768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
75, 250
               

               
Conread position:
               
292-611
               

               
Cow position:
               
chr22:9372284-9372611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
45, 8
               

               
Conread position:
               
292-611
               

               
Cow position:
               
chr22:13286208-13286538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
65, 249
               

               
Conread position:
               
292-611
               

               
Cow position:
               
chr22:22612876-22613196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 166
               

               
Conread position:
               
292-611
               

               
Cow position:
               
chr22:37201621-37201939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 35
               

               
Conread position:
               
292-612
               

               
Cow position:
               
chr22:845666-845994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 147
               

               
Conread position:
               
292-612
               

               
Cow position:
               
chr22:6215790-6215465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 47
               

               
Conread position:
               
292-612
               

               
Cow position:
               
chr22:42612221-42612550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
88, 280
               

               
Conread position:
               
292-613
               

               
Cow position:
               
chr22:7884755-7885082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
69, 209
               

               
Conread position:
               
292-613
               

               
Cow position:
               
chr22:24176110-24175804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
82, 62
               

               
Conread position:
               
292-614
               

               
Cow position:
               
chr22:2403636-2403973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 279
               

               
Conread position:
               
292-614
               

               
Cow position:
               
chr22:3325345-3325681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
69, 108
               

               
Conread position:
               
292-614
               

               
Cow position:
               
chr22:3950005-3950345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
58, 221
               

               
Conread position:
               
292-614
               

               
Cow position:
               
chr22:7882314-7882645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 151
               

               
Conread position:
               
292-614
               

               
Cow position:
               
chr22:15490423-15490747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 200
               

               
Conread position:
               
292-614
               

               
Cow position:
               
chr22:25361254-25361577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 88
               

               
Conread position:
               
292-614
               

               
Cow position:
               
chr22:27431919-27431610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 101
               

               
Conread position:
               
292-614
               

               
Cow position:
               
chr22:28665033-28665376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
73, 218
               

               
Conread position:
               
292-614
               

               
Cow position:
               
chr22:40048327-40048647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 75
               

               
Conread position:
               
293-614
               

               
Cow position:
               
chr22:1975377-1975702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 267
               

               
Conread position:
               
293-614
               

               
Cow position:
               
chr22:3964950-3965279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
89, 203
               

               
Conread position:
               
294-452
               

               
Cow position:
               
chr22:4026374-4026534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
294-614
               

               
Cow position:
               
chr22:15090506-15090835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 266
               

               
Conread position:
               
296-507
               

               
Cow position:
               
chr22:10585933-10585717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
296-614
               

               
Cow position:
               
chr22:10685320-10684998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 262
               

               
Conread position:
               
296-614
               

               
Cow position:
               
chr22:26166848-26166533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
11, 62
               

               
Conread position:
               
300-562
               

               
Cow position:
               
chr22:226671-226412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
39, 63
               

               
Conread position:
               
302-614
               

               
Cow position:
               
chr22:43119955-43119636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 184
               

               
Conread position:
               
304-612
               

               
Cow position:
               
chr22:5616075-5616393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
37, 177
               

               
Conread position:
               
305-614
               

               
Cow position:
               
chr22:10632692-10633007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 229
               

               
Conread position:
               
306-498
               

               
Cow position:
               
chr22:33918121-33917917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
307-596
               

               
Cow position:
               
chr22:13849671-13849378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
60, 79
               

               
Conread position:
               
310-452
               

               
Cow position:
               
chr22:3944956-3945104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
320-605
               

               
Cow position:
               
chr22:17125374-17125666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 66
               

               
Conread position:
               
323-600
               

               
Cow position:
               
chr22:3366992-3367265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
89, 31
               

               
Conread position:
               
324-614
               

               
Cow position:
               
chr22:30998693-30998979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
42, 135
               

               
Conread position:
               
325-593
               

               
Cow position:
               
chr22:23689410-23689132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
21, 171
               

               
Conread position:
               
325-607
               

               
Cow position:
               
chr22:15025307-15025024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 67
               

               
Conread position:
               
326-614
               

               
Cow position:
               
chr22:27274895-27274607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
28, 157
               

               
Conread position:
               
327-605
               

               
Cow position:
               
chr22:27835337-27835617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
85, 34
               

               
Conread position:
               
327-614
               

               
Cow position:
               
chr22:27047601-27047320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 86
               

               
Conread position:
               
330-610
               

               
Cow position:
               
chr22:2523764-2524052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
43, 107
               

               
Conread position:
               
334-494
               

               
Cow position:
               
chr22:7252842-7252667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
340-610
               

               
Cow position:
               
chr22:1848876-1849163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
27, 175
               

               
Conread position:
               
340-614
               

               
Cow position:
               
chr22:36433158-36432880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
40, 222
               

               
Conread position:
               
349-611
               

               
Cow position:
               
chr22:12388913-12389189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
11, 41
               

               
Conread position:
               
350-612
               

               
Cow position:
               
chr22:2912756-2912499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
56, 15
               

               
Conread position:
               
359-614
               

               
Cow position:
               
chr22:43131715-43131466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
164, 18
               

               
Conread position:
               
360-611
               

               
Cow position:
               
chr22:24628816-24628568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
54, 111
               

               
Conread position:
               
363-588
               

               
Cow position:
               
chr22:19173536-19173761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
49, 197
               

               
Conread position:
               
363-596
               

               
Cow position:
               
chr22:3241859-3241628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
363-614
               

               
Cow position:
               
chr22:9283761-9283505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
49, 36
               

               
Conread position:
               
363-614
               

               
Cow position:
               
chr22:26969619-26969882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
40, 127
               

               
Conread position:
               
365-605
               

               
Cow position:
               
chr22:32698599-32698844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
39, 127
               

               
Conread position:
               
369-614
               

               
Cow position:
               
chr22:45845989-45846235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 121
               

               
Conread position:
               
371-613
               

               
Cow position:
               
chr22:1563405-1563161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
41, 162
               

               
Conread position:
               
373-614
               

               
Cow position:
               
chr22:25387172-25387420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
16, 26
               

               
Conread position:
               
377-560
               

               
Cow position:
               
chr22:22553384-22553200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
29, 103
               

               
Conread position:
               
381-598
               

               
Cow position:
               
chr22:40789424-40789643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
31, 115
               

               
Conread position:
               
386-612
               

               
Cow position:
               
chr22:31153816-31154045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
26, 105
               

               
Conread position:
               
386-614
               

               
Cow position:
               
chr22:34735728-34735957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
31, 72
               

               
Conread position:
               
393-605
               

               
Cow position:
               
chr22:19827998-19827779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
19, 172
               

               
Conread position:
               
405-614
               

               
Cow position:
               
chr22:4011063-4011277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
7, 75
               

               
Conread position:
               
412-612
               

               
Cow position:
               
chr22:1870989-1871189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
70, 48
               

               
Conread position:
               
432-614
               

               
Cow position:
               
chr22:28704096-28704277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 56
               

               
Conread position:
               
434-614
               

               
Cow position:
               
chr22:1659072-1659257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 74
               

               
Conread position:
               
440-614
               

               
Cow position:
               
chr22:42617920-42618093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
86, 16
               
Show alignments to all cow chromosomes.