Cow genome map

Conread name: rthg11_h16.y1

Conread position: 149-612
Cow position:
Alignm length: 476
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 9

Conread position: 149-614
Cow position:
Alignm length: 480
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 101

Conread position: 157-538
Cow position:
Alignm length: 395
Alignm identity: 262
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 92, 12

Conread position: 158-614
Cow position:
Alignm length: 479
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 16

Conread position: 161-614
Cow position:
Alignm length: 468
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 207

Conread position: 166-444
Cow position:
Alignm length: 286
Alignm identity: 199
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 96, 107

Conread position: 168-605
Cow position:
Alignm length: 447
Alignm identity: 295
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 115, 105

Conread position: 168-613
Cow position:
Alignm length: 449
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 104

Conread position: 170-498
Cow position:
Alignm length: 342
Alignm identity: 246
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 201, 73

Conread position: 171-415
Cow position:
Alignm length: 248
Alignm identity: 168
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 99, 122

Conread position: 171-424
Cow position:
Alignm length: 267
Alignm identity: 183
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 95, 156

Conread position: 171-452
Cow position:
Alignm length: 290
Alignm identity: 207
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 83, 72

Conread position: 171-453
Cow position:
Alignm length: 292
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 94

Conread position: 171-456
Cow position:
Alignm length: 291
Alignm identity: 202
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 208, 78

Conread position: 171-459
Cow position:
Alignm length: 294
Alignm identity: 193
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 186, 80

Conread position: 171-460
Cow position:
Alignm length: 295
Alignm identity: 210
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 207, 78

Conread position: 171-460
Cow position:
Alignm length: 302
Alignm identity: 206
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 82, 44

Conread position: 171-460
Cow position:
Alignm length: 301
Alignm identity: 214
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 190, 78

Conread position: 171-464
Cow position:
Alignm length: 301
Alignm identity: 214
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 200, 74

Conread position: 171-487
Cow position:
Alignm length: 330
Alignm identity: 237
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 37, 77

Conread position: 171-507
Cow position:
Alignm length: 350
Alignm identity: 241
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 46, 79

Conread position: 171-515
Cow position:
Alignm length: 354
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 60

Conread position: 171-521
Cow position:
Alignm length: 363
Alignm identity: 247
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 239, 76

Conread position: 171-546
Cow position:
Alignm length: 394
Alignm identity: 281
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 76, 36

Conread position: 171-579
Cow position:
Alignm length: 425
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 74

Conread position: 171-579
Cow position:
Alignm length: 417
Alignm identity: 279
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 190, 97

Conread position: 171-591
Cow position:
Alignm length: 452
Alignm identity: 295
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 95, 330

Conread position: 171-593
Cow position:
Alignm length: 434
Alignm identity: 286
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 125, 78

Conread position: 171-594
Cow position:
Alignm length: 438
Alignm identity: 296
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 196, 74

Conread position: 171-596
Cow position:
Alignm length: 440
Alignm identity: 292
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 61, 7

Conread position: 171-605
Cow position:
Alignm length: 441
Alignm identity: 293
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 190, 73

Conread position: 171-605
Cow position:
Alignm length: 455
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 81

Conread position: 171-610
Cow position:
Alignm length: 457
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 79

Conread position: 171-610
Cow position:
Alignm length: 456
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 72

Conread position: 171-610
Cow position:
Alignm length: 459
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 73

Conread position: 171-611
Cow position:
Alignm length: 454
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 102

Conread position: 171-611
Cow position:
Alignm length: 455
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 74

Conread position: 171-612
Cow position:
Alignm length: 455
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 69

Conread position: 171-612
Cow position:
Alignm length: 455
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 74

Conread position: 171-613
Cow position:
Alignm length: 454
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 79

Conread position: 171-614
Cow position:
Alignm length: 458
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 65

Conread position: 171-614
Cow position:
Alignm length: 454
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 74

Conread position: 171-614
Cow position:
Alignm length: 455
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 53

Conread position: 171-614
Cow position:
Alignm length: 464
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 199

Conread position: 171-614
Cow position:
Alignm length: 460
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 49

Conread position: 171-614
Cow position:
Alignm length: 455
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 74

Conread position: 171-614
Cow position:
Alignm length: 461
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 62

Conread position: 171-614
Cow position:
Alignm length: 459
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 102

Conread position: 173-452
Cow position:
Alignm length: 288
Alignm identity: 206
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 123, 72

Conread position: 173-581
Cow position:
Alignm length: 419
Alignm identity: 270
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 37, 44

Conread position: 173-591
Cow position:
Alignm length: 435
Alignm identity: 298
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 124, 72

Conread position: 173-604
Cow position:
Alignm length: 448
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 72

Conread position: 173-612
Cow position:
Alignm length: 456
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 72

Conread position: 174-612
Cow position:
Alignm length: 457
Alignm identity: 300
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 37, 174

Conread position: 176-521
Cow position:
Alignm length: 352
Alignm identity: 230
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 86, 69

Conread position: 176-605
Cow position:
Alignm length: 435
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 68

Conread position: 177-613
Cow position:
Alignm length: 440
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 49

Conread position: 177-614
Cow position:
Alignm length: 443
Alignm identity: 302
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 119, 68

Conread position: 180-584
Cow position:
Alignm length: 419
Alignm identity: 278
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 91, 69

Conread position: 180-612
Cow position:
Alignm length: 472
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 340

Conread position: 182-605
Cow position:
Alignm length: 438
Alignm identity: 291
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 68, 186

Conread position: 187-598
Cow position:
Alignm length: 436
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 165

Conread position: 193-614
Cow position:
Alignm length: 443
Alignm identity: 304
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 63, 144

Conread position: 205-515
Cow position:
Alignm length: 318
Alignm identity: 211
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 152, 43

Conread position: 208-591
Cow position:
Alignm length: 405
Alignm identity: 268
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 13, 25

Conread position: 216-614
Cow position:
Alignm length: 405
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 57

Conread position: 248-613
Cow position:
Alignm length: 382
Alignm identity: 265
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 45, 22

Conread position: 271-614
Cow position:
Alignm length: 359
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 11

Conread position: 282-507
Cow position:
Alignm length: 237
Alignm identity: 178
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 10, 119

Conread position: 282-610
Cow position:
Alignm length: 338
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 203

Conread position: 282-611
Cow position:
Alignm length: 337
Alignm identity: 227
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 91, 14

Conread position: 283-614
Cow position:
Alignm length: 354
Alignm identity: 237
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 74, 216

Conread position: 289-586
Cow position:
Alignm length: 309
Alignm identity: 221
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 70, 279

Conread position: 292-523
Cow position:
Alignm length: 240
Alignm identity: 175
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 75, 26

Conread position: 292-524
Cow position:
Alignm length: 246
Alignm identity: 185
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 69, 202

Conread position: 292-533
Cow position:
Alignm length: 258
Alignm identity: 183
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 37, 21

Conread position: 292-538
Cow position:
Alignm length: 258
Alignm identity: 196
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 75, 191

Conread position: 292-591
Cow position:
Alignm length: 311
Alignm identity: 203
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 79, 111

Conread position: 292-598
Cow position:
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 277

Conread position: 292-612
Cow position:
Alignm length: 332
Alignm identity: 232
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 69, 53

Conread position: 292-612
Cow position:
Alignm length: 335
Alignm identity: 241
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 75, 56

Conread position: 292-613
Cow position:
Alignm length: 337
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 59

Conread position: 292-614
Cow position:
Alignm length: 338
Alignm identity: 241
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 86, 36

Conread position: 292-614
Cow position:
Alignm length: 335
Alignm identity: 239
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 120, 63

Conread position: 292-614
Cow position:
Alignm length: 328
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 168

Conread position: 292-614
Cow position:
Alignm length: 333
Alignm identity: 237
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 88, 142

Conread position: 292-614
Cow position:
Alignm length: 330
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 56

Conread position: 292-614
Cow position:
Alignm length: 344
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 201

Conread position: 292-614
Cow position:
Alignm length: 333
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 87

Conread position: 292-614
Cow position:
Alignm length: 337
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 272

Conread position: 304-597
Cow position:
Alignm length: 298
Alignm identity: 201
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 108, 51

Conread position: 309-612
Cow position:
Alignm length: 318
Alignm identity: 222
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 56, 180

Conread position: 311-556
Cow position:
Alignm length: 254
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 184

Conread position: 312-593
Cow position:
Alignm length: 304
Alignm identity: 209
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 68, 97

Conread position: 312-614
Cow position:
Alignm length: 314
Alignm identity: 218
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 47, 41

Conread position: 313-613
Cow position:
Alignm length: 312
Alignm identity: 217
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 54, 192

Conread position: 313-614
Cow position:
Alignm length: 307
Alignm identity: 213
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 99, 52

Conread position: 319-614
Cow position:
Alignm length: 309
Alignm identity: 203
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 7, 196

Conread position: 327-614
Cow position:
Alignm length: 303
Alignm identity: 216
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 44, 254

Conread position: 330-614
Cow position:
Alignm length: 296
Alignm identity: 211
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 27, 167

Conread position: 334-614
Cow position:
Alignm length: 295
Alignm identity: 200
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 63

Conread position: 335-612
Cow position:
Alignm length: 288
Alignm identity: 200
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 34, 56

Conread position: 343-614
Cow position:
Alignm length: 278
Alignm identity: 203
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 26, 107

Conread position: 344-614
Cow position:
Alignm length: 282
Alignm identity: 199
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 69, 54

Conread position: 363-598
Cow position:
Alignm length: 241
Alignm identity: 170
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 31

Conread position: 363-614
Cow position:
Alignm length: 261
Alignm identity: 186
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 49, 34

Conread position: 368-605
Cow position:
Alignm length: 249
Alignm identity: 168
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 38, 193

Conread position: 369-614
Cow position:
Alignm length: 262
Alignm identity: 187
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 75

Conread position: 371-614
Cow position:
Alignm length: 253
Alignm identity: 168
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 35, 19

Conread position: 378-614
Cow position:
Alignm length: 245
Alignm identity: 178
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 34, 116

Conread position: 387-614
Cow position:
Alignm length: 240
Alignm identity: 166
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 47

Conread position: 389-614
Cow position:
Alignm length: 234
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 105

Conread position: 395-614
Cow position:
Alignm length: 227
Alignm identity: 157
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 17, 137

Conread position: 399-614
Cow position:
Alignm length: 223
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 29

Conread position: 413-600
Cow position:
Alignm length: 194
Alignm identity: 138
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 152

Conread position: 414-614
Cow position:
Alignm length: 202
Alignm identity: 140
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 113, 52

Conread position: 418-614
Cow position:
Alignm length: 199
Alignm identity: 137
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 76, 41

Conread position: 431-598
Cow position:
Alignm length: 170
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 25

Conread position: 431-614
Cow position:
Alignm length: 186
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 23

Conread position: 448-614
Cow position:
Alignm length: 170
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 59

Conread position: 458-587
Cow position:
Alignm length: 131
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 69, 31

Show alignments to all cow chromosomes.