Cow genome map

Conread name: rthg11_h16.y1

Conread position: 160-524
Cow position:
Alignm length: 378
Alignm identity: 267
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 106, 62

Conread position: 161-614
Cow position:
Alignm length: 469
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 70

Conread position: 164-605
Cow position:
Alignm length: 458
Alignm identity: 309
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 104, 67

Conread position: 165-613
Cow position:
Alignm length: 472
Alignm identity: 306
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 79, 138

Conread position: 168-460
Cow position:
Alignm length: 295
Alignm identity: 198
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 81, 71

Conread position: 168-614
Cow position:
Alignm length: 460
Alignm identity: 309
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 199, 66

Conread position: 171-485
Cow position:
Alignm length: 329
Alignm identity: 221
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 194, 73

Conread position: 171-512
Cow position:
Alignm length: 350
Alignm identity: 245
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 235, 65

Conread position: 171-538
Cow position:
Alignm length: 385
Alignm identity: 272
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 125, 78

Conread position: 171-548
Cow position:
Alignm length: 388
Alignm identity: 272
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 94, 102

Conread position: 171-579
Cow position:
Alignm length: 429
Alignm identity: 295
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 12, 75

Conread position: 171-601
Cow position:
Alignm length: 438
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 74

Conread position: 171-602
Cow position:
Alignm length: 442
Alignm identity: 298
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 43, 54

Conread position: 171-605
Cow position:
Alignm length: 462
Alignm identity: 314
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 91, 102

Conread position: 171-605
Cow position:
Alignm length: 452
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 94

Conread position: 171-605
Cow position:
Alignm length: 459
Alignm identity: 308
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 79, 221

Conread position: 171-605
Cow position:
Alignm length: 455
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 45

Conread position: 171-607
Cow position:
Alignm length: 453
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 74

Conread position: 171-611
Cow position:
Alignm length: 457
Alignm identity: 309
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 53, 44

Conread position: 171-611
Cow position:
Alignm length: 448
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 74

Conread position: 171-612
Cow position:
Alignm length: 464
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 74

Conread position: 171-612
Cow position:
Alignm length: 476
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 252

Conread position: 171-613
Cow position:
Alignm length: 457
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 77

Conread position: 171-613
Cow position:
Alignm length: 463
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 26

Conread position: 171-613
Cow position:
Alignm length: 456
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 102

Conread position: 171-614
Cow position:
Alignm length: 452
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 52

Conread position: 171-614
Cow position:
Alignm length: 461
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 104

Conread position: 171-614
Cow position:
Alignm length: 474
Alignm identity: 316
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 77, 204

Conread position: 171-614
Cow position:
Alignm length: 461
Alignm identity: 303
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 153, 76

Conread position: 171-614
Cow position:
Alignm length: 462
Alignm identity: 308
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 77, 55

Conread position: 171-614
Cow position:
Alignm length: 451
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 77

Conread position: 171-614
Cow position:
Alignm length: 460
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 56

Conread position: 171-614
Cow position:
Alignm length: 450
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 73

Conread position: 171-614
Cow position:
Alignm length: 458
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 102

Conread position: 171-614
Cow position:
Alignm length: 454
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 78

Conread position: 171-614
Cow position:
Alignm length: 470
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 74

Conread position: 171-614
Cow position:
Alignm length: 462
Alignm identity: 321
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 193, 56

Conread position: 171-614
Cow position:
Alignm length: 453
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 33

Conread position: 172-612
Cow position:
Alignm length: 446
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 11

Conread position: 172-614
Cow position:
Alignm length: 462
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 80

Conread position: 173-462
Cow position:
Alignm length: 298
Alignm identity: 219
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 194, 72

Conread position: 173-521
Cow position:
Alignm length: 355
Alignm identity: 235
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 76, 43

Conread position: 173-593
Cow position:
Alignm length: 435
Alignm identity: 296
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 125, 71

Conread position: 173-612
Cow position:
Alignm length: 448
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 66

Conread position: 173-613
Cow position:
Alignm length: 455
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 72

Conread position: 173-614
Cow position:
Alignm length: 458
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 72

Conread position: 173-614
Cow position:
Alignm length: 457
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 72

Conread position: 174-614
Cow position:
Alignm length: 453
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 71

Conread position: 175-456
Cow position:
Alignm length: 285
Alignm identity: 197
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 82, 98

Conread position: 178-614
Cow position:
Alignm length: 443
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 64

Conread position: 179-605
Cow position:
Alignm length: 451
Alignm identity: 301
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 70, 258

Conread position: 183-528
Cow position:
Alignm length: 349
Alignm identity: 245
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 234, 66

Conread position: 183-614
Cow position:
Alignm length: 446
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 18

Conread position: 184-594
Cow position:
Alignm length: 429
Alignm identity: 288
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 92, 64

Conread position: 186-456
Cow position:
Alignm length: 278
Alignm identity: 200
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 110, 56

Conread position: 186-602
Cow position:
Alignm length: 434
Alignm identity: 282
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 149, 59

Conread position: 187-452
Cow position:
Alignm length: 271
Alignm identity: 195
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 225, 62

Conread position: 187-614
Cow position:
Alignm length: 443
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 63

Conread position: 193-491
Cow position:
Alignm length: 305
Alignm identity: 195
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 213, 80

Conread position: 198-614
Cow position:
Alignm length: 425
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 45

Conread position: 204-614
Cow position:
Alignm length: 419
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 64

Conread position: 216-492
Cow position:
Alignm length: 293
Alignm identity: 210
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 145, 29

Conread position: 219-486
Cow position:
Alignm length: 279
Alignm identity: 196
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 76, 26

Conread position: 227-551
Cow position:
Alignm length: 341
Alignm identity: 250
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 66, 18

Conread position: 227-614
Cow position:
Alignm length: 394
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 16

Conread position: 231-591
Cow position:
Alignm length: 376
Alignm identity: 250
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 136, 18

Conread position: 238-614
Cow position:
Alignm length: 388
Alignm identity: 249
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 73

Conread position: 248-456
Cow position:
Alignm length: 216
Alignm identity: 162
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 22, 7

Conread position: 264-614
Cow position:
Alignm length: 368
Alignm identity: 243
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 9, 258

Conread position: 265-600
Cow position:
Alignm length: 355
Alignm identity: 245
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 13, 230

Conread position: 275-614
Cow position:
Alignm length: 353
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 8

Conread position: 277-480
Cow position:
Alignm length: 212
Alignm identity: 161
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 17, 86

Conread position: 281-602
Cow position:
Alignm length: 338
Alignm identity: 229
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 133, 15

Conread position: 282-452
Cow position:
Alignm length: 181
Alignm identity: 134
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 282-591
Cow position:
Alignm length: 317
Alignm identity: 220
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 20, 80

Conread position: 282-598
Cow position:
Alignm length: 335
Alignm identity: 231
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 18, 286

Conread position: 282-602
Cow position:
Alignm length: 338
Alignm identity: 243
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 14, 24

Conread position: 282-614
Cow position:
Alignm length: 338
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 79

Conread position: 282-614
Cow position:
Alignm length: 343
Alignm identity: 240
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 16, 87

Conread position: 284-538
Cow position:
Alignm length: 265
Alignm identity: 191
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 12, 95

Conread position: 285-614
Cow position:
Alignm length: 341
Alignm identity: 237
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 11, 193

Conread position: 291-604
Cow position:
Alignm length: 324
Alignm identity: 221
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 70, 22

Conread position: 292-460
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 120, 59

Conread position: 292-524
Cow position:
Alignm length: 244
Alignm identity: 182
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 69, 21

Conread position: 292-525
Cow position:
Alignm length: 239
Alignm identity: 174
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 86, 46

Conread position: 292-538
Cow position:
Alignm length: 260
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 292-541
Cow position:
Alignm length: 261
Alignm identity: 185
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 114, 67

Conread position: 292-595
Cow position:
Alignm length: 315
Alignm identity: 224
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 88, 194

Conread position: 292-610
Cow position:
Alignm length: 323
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 62

Conread position: 292-614
Cow position:
Alignm length: 328
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 130

Conread position: 292-614
Cow position:
Alignm length: 328
Alignm identity: 230
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 75, 8

Conread position: 292-614
Cow position:
Alignm length: 341
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 297

Conread position: 292-614
Cow position:
Alignm length: 339
Alignm identity: 239
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 56, 30

Conread position: 294-614
Cow position:
Alignm length: 334
Alignm identity: 224
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 53, 103

Conread position: 295-531
Cow position:
Alignm length: 247
Alignm identity: 172
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 112, 59

Conread position: 296-614
Cow position:
Alignm length: 326
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 169

Conread position: 299-552
Cow position:
Alignm length: 264
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 46

Conread position: 299-614
Cow position:
Alignm length: 330
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 56

Conread position: 301-614
Cow position:
Alignm length: 329
Alignm identity: 225
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 66, 271

Conread position: 315-588
Cow position:
Alignm length: 282
Alignm identity: 206
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 98, 250

Conread position: 320-614
Cow position:
Alignm length: 308
Alignm identity: 211
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 46, 57

Conread position: 322-614
Cow position:
Alignm length: 301
Alignm identity: 215
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 35, 172

Conread position: 330-614
Cow position:
Alignm length: 298
Alignm identity: 200
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 82, 240

Conread position: 333-602
Cow position:
Alignm length: 283
Alignm identity: 189
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 70, 28

Conread position: 340-612
Cow position:
Alignm length: 289
Alignm identity: 198
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 226

Conread position: 342-591
Cow position:
Alignm length: 262
Alignm identity: 182
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 25, 158

Conread position: 342-613
Cow position:
Alignm length: 280
Alignm identity: 207
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 38, 102

Conread position: 361-605
Cow position:
Alignm length: 259
Alignm identity: 178
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 7, 203

Conread position: 362-614
Cow position:
Alignm length: 262
Alignm identity: 184
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 127

Conread position: 363-524
Cow position:
Alignm length: 168
Alignm identity: 126
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 47, 24

Conread position: 363-598
Cow position:
Alignm length: 244
Alignm identity: 177
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 49, 204

Conread position: 363-602
Cow position:
Alignm length: 253
Alignm identity: 173
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 44, 132

Conread position: 363-605
Cow position:
Alignm length: 246
Alignm identity: 173
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 43, 102

Conread position: 363-610
Cow position:
Alignm length: 256
Alignm identity: 176
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 129

Conread position: 365-612
Cow position:
Alignm length: 254
Alignm identity: 177
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 43, 134

Conread position: 373-614
Cow position:
Alignm length: 248
Alignm identity: 179
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 14, 26

Conread position: 375-612
Cow position:
Alignm length: 247
Alignm identity: 177
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 37, 55

Conread position: 392-614
Cow position:
Alignm length: 231
Alignm identity: 160
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 25, 166

Conread position: 400-614
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 10, 164

Conread position: 404-608
Cow position:
Alignm length: 210
Alignm identity: 147
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 8, 93

Conread position: 408-614
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 33, 51

Conread position: 413-614
Cow position:
Alignm length: 204
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 67, 53

Conread position: 418-614
Cow position:
Alignm length: 203
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 85

Conread position: 419-614
Cow position:
Alignm length: 202
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 72

Conread position: 432-613
Cow position:
Alignm length: 186
Alignm identity: 137
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 26, 129

Conread position: 447-614
Cow position:
Alignm length: 174
Alignm identity: 125
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 80, 13

Conread position: 448-614
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 11, 112

Show alignments to all cow chromosomes.