Cow genome map

Conread name: rthg11_h16.y1

Conread position: 151-613
Cow position:
Alignm length: 467
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 13

Conread position: 162-605
Cow position:
Alignm length: 457
Alignm identity: 308
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 251, 82

Conread position: 164-614
Cow position:
Alignm length: 466
Alignm identity: 319
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 203, 38

Conread position: 168-546
Cow position:
Alignm length: 393
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 77

Conread position: 168-614
Cow position:
Alignm length: 465
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 83

Conread position: 171-452
Cow position:
Alignm length: 295
Alignm identity: 205
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 126, 74

Conread position: 171-455
Cow position:
Alignm length: 294
Alignm identity: 204
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 105, 44

Conread position: 171-455
Cow position:
Alignm length: 309
Alignm identity: 215
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 72, 0

Conread position: 171-458
Cow position:
Alignm length: 292
Alignm identity: 208
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 243, 72

Conread position: 171-479
Cow position:
Alignm length: 318
Alignm identity: 215
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 83, 72

Conread position: 171-480
Cow position:
Alignm length: 322
Alignm identity: 230
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 26, 73

Conread position: 171-485
Cow position:
Alignm length: 346
Alignm identity: 240
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 78, 48

Conread position: 171-536
Cow position:
Alignm length: 372
Alignm identity: 270
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 241, 48

Conread position: 171-538
Cow position:
Alignm length: 383
Alignm identity: 264
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 90, 47

Conread position: 171-595
Cow position:
Alignm length: 441
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 22

Conread position: 171-605
Cow position:
Alignm length: 446
Alignm identity: 299
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 241, 72

Conread position: 171-605
Cow position:
Alignm length: 444
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 77

Conread position: 171-612
Cow position:
Alignm length: 456
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 74

Conread position: 171-612
Cow position:
Alignm length: 444
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 28

Conread position: 171-614
Cow position:
Alignm length: 449
Alignm identity: 307
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 241, 73

Conread position: 171-614
Cow position:
Alignm length: 464
Alignm identity: 317
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 42, 79

Conread position: 171-614
Cow position:
Alignm length: 452
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 21

Conread position: 171-614
Cow position:
Alignm length: 460
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 73

Conread position: 171-614
Cow position:
Alignm length: 458
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 91

Conread position: 171-614
Cow position:
Alignm length: 453
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 91

Conread position: 171-614
Cow position:
Alignm length: 453
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 78

Conread position: 172-603
Cow position:
Alignm length: 439
Alignm identity: 297
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 78, 41

Conread position: 173-515
Cow position:
Alignm length: 359
Alignm identity: 253
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 93, 198

Conread position: 173-602
Cow position:
Alignm length: 437
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 78

Conread position: 173-613
Cow position:
Alignm length: 466
Alignm identity: 308
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 93, 378

Conread position: 173-614
Cow position:
Alignm length: 458
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 72

Conread position: 173-614
Cow position:
Alignm length: 449
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 75

Conread position: 174-614
Cow position:
Alignm length: 456
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 25

Conread position: 174-614
Cow position:
Alignm length: 467
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 198

Conread position: 175-614
Cow position:
Alignm length: 453
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 69

Conread position: 177-605
Cow position:
Alignm length: 441
Alignm identity: 287
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 197, 85

Conread position: 184-614
Cow position:
Alignm length: 446
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 65

Conread position: 185-485
Cow position:
Alignm length: 311
Alignm identity: 216
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 75, 87

Conread position: 193-458
Cow position:
Alignm length: 273
Alignm identity: 194
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 168, 57

Conread position: 195-611
Cow position:
Alignm length: 436
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 35

Conread position: 203-537
Cow position:
Alignm length: 339
Alignm identity: 226
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 176, 42

Conread position: 204-614
Cow position:
Alignm length: 430
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 41

Conread position: 219-614
Cow position:
Alignm length: 405
Alignm identity: 277
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 57, 26

Conread position: 219-614
Cow position:
Alignm length: 404
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 30

Conread position: 222-611
Cow position:
Alignm length: 411
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 27

Conread position: 223-518
Cow position:
Alignm length: 308
Alignm identity: 223
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 182, 22

Conread position: 251-458
Cow position:
Alignm length: 218
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 254-524
Cow position:
Alignm length: 278
Alignm identity: 194
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 12, 37

Conread position: 255-456
Cow position:
Alignm length: 214
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 11, 127

Conread position: 282-538
Cow position:
Alignm length: 270
Alignm identity: 199
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 98, 14

Conread position: 282-614
Cow position:
Alignm length: 342
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 143

Conread position: 282-614
Cow position:
Alignm length: 343
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 17

Conread position: 282-614
Cow position:
Alignm length: 338
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 60

Conread position: 285-602
Cow position:
Alignm length: 337
Alignm identity: 219
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 26

Conread position: 292-485
Cow position:
Alignm length: 211
Alignm identity: 160
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 48, 0

Conread position: 292-496
Cow position:
Alignm length: 210
Alignm identity: 152
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 62, 73

Conread position: 292-576
Cow position:
Alignm length: 295
Alignm identity: 202
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 86, 112

Conread position: 292-605
Cow position:
Alignm length: 324
Alignm identity: 225
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 68, 203

Conread position: 292-612
Cow position:
Alignm length: 332
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 213

Conread position: 292-613
Cow position:
Alignm length: 338
Alignm identity: 235
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 69, 198

Conread position: 292-613
Cow position:
Alignm length: 336
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 215

Conread position: 292-613
Cow position:
Alignm length: 332
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 203

Conread position: 292-614
Cow position:
Alignm length: 334
Alignm identity: 238
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 75, 150

Conread position: 292-614
Cow position:
Alignm length: 326
Alignm identity: 233
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 120, 166

Conread position: 292-614
Cow position:
Alignm length: 332
Alignm identity: 226
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 58, 17

Conread position: 292-614
Cow position:
Alignm length: 328
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 143

Conread position: 292-614
Cow position:
Alignm length: 338
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 12

Conread position: 292-614
Cow position:
Alignm length: 336
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 207

Conread position: 293-485
Cow position:
Alignm length: 202
Alignm identity: 159
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 70, 0

Conread position: 293-538
Cow position:
Alignm length: 249
Alignm identity: 175
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 116, 25

Conread position: 297-555
Cow position:
Alignm length: 272
Alignm identity: 198
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 81, 219

Conread position: 297-584
Cow position:
Alignm length: 299
Alignm identity: 207
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 31, 173

Conread position: 297-587
Cow position:
Alignm length: 301
Alignm identity: 211
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 70, 86

Conread position: 304-452
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 304-614
Cow position:
Alignm length: 318
Alignm identity: 222
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 65, 51

Conread position: 312-614
Cow position:
Alignm length: 311
Alignm identity: 220
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 58, 22

Conread position: 315-614
Cow position:
Alignm length: 310
Alignm identity: 221
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 100, 46

Conread position: 317-614
Cow position:
Alignm length: 309
Alignm identity: 224
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 8, 213

Conread position: 321-607
Cow position:
Alignm length: 302
Alignm identity: 212
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 59, 203

Conread position: 321-614
Cow position:
Alignm length: 308
Alignm identity: 216
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 54, 104

Conread position: 321-614
Cow position:
Alignm length: 303
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 163

Conread position: 322-603
Cow position:
Alignm length: 298
Alignm identity: 197
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 39, 75

Conread position: 323-614
Cow position:
Alignm length: 305
Alignm identity: 210
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 5, 171

Conread position: 324-592
Cow position:
Alignm length: 283
Alignm identity: 187
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 45, 162

Conread position: 326-595
Cow position:
Alignm length: 279
Alignm identity: 191
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 27, 63

Conread position: 334-610
Cow position:
Alignm length: 297
Alignm identity: 201
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 25, 21

Conread position: 343-613
Cow position:
Alignm length: 276
Alignm identity: 189
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 31, 11

Conread position: 349-614
Cow position:
Alignm length: 274
Alignm identity: 192
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 63, 14

Conread position: 350-614
Cow position:
Alignm length: 274
Alignm identity: 181
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 102

Conread position: 351-614
Cow position:
Alignm length: 281
Alignm identity: 197
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 18, 153

Conread position: 358-605
Cow position:
Alignm length: 253
Alignm identity: 176
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 59, 22

Conread position: 363-614
Cow position:
Alignm length: 259
Alignm identity: 176
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 95, 25

Conread position: 363-614
Cow position:
Alignm length: 260
Alignm identity: 196
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 54, 132

Conread position: 371-614
Cow position:
Alignm length: 249
Alignm identity: 178
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 46, 91

Conread position: 378-614
Cow position:
Alignm length: 242
Alignm identity: 177
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 39, 120

Conread position: 378-614
Cow position:
Alignm length: 246
Alignm identity: 175
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 28, 117

Conread position: 390-613
Cow position:
Alignm length: 232
Alignm identity: 159
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 29, 52

Conread position: 390-614
Cow position:
Alignm length: 232
Alignm identity: 160
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 15

Conread position: 392-614
Cow position:
Alignm length: 229
Alignm identity: 166
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 20, 164

Conread position: 399-614
Cow position:
Alignm length: 224
Alignm identity: 168
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 13, 166

Conread position: 400-576
Cow position:
Alignm length: 182
Alignm identity: 131
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 14, 96

Conread position: 405-611
Cow position:
Alignm length: 212
Alignm identity: 149
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 53, 86

Conread position: 413-614
Cow position:
Alignm length: 204
Alignm identity: 141
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 57, 74

Conread position: 437-614
Cow position:
Alignm length: 180
Alignm identity: 131
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 14

Conread position: 467-610
Cow position:
Alignm length: 146
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 85

Show alignments to all cow chromosomes.