Cow genome map


           Conread name:
           rthg11_h16.y1
        

               Conread position:
               146-530
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               16, 101
               

               Conread position:
               171-509
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               241
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               243, 19
               

               Conread position:
               171-511
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               248
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               25, 75
               

               Conread position:
               171-594
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 162
               

               Conread position:
               171-602
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               306
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               244, 73
               

               Conread position:
               171-606
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 85
               

               Conread position:
               171-612
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 74
               

               Conread position:
               171-612
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 77
               

               Conread position:
               171-614
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               317
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               78, 215
               

               Conread position:
               171-614
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 68
               

               Conread position:
               171-614
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 74
               

               Conread position:
               171-614
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 25
               

               Conread position:
               171-614
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 77
               

               Conread position:
               171-614
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 73
               

               Conread position:
               171-614
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 45
               

               Conread position:
               171-614
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               303
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               200, 63
               

               Conread position:
               172-538
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               252
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               48, 52
               

               Conread position:
               172-605
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               305
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               124, 73
               

               Conread position:
               173-551
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               269
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               239, 71
               

               Conread position:
               174-611
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               291
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               94, 21
               

               Conread position:
               175-566
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 91
               

               Conread position:
               176-483
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               78, 95
               

               Conread position:
               177-611
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               300
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               119, 59
               

               Conread position:
               178-404
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               88, 105
               

               Conread position:
               187-451
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               180, 62
               

               Conread position:
               207-614
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               278
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               69, 44
               

               Conread position:
               209-601
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               210, 36
               

               Conread position:
               223-458
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               39, 52
               

               Conread position:
               223-614
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 22
               

               Conread position:
               224-613
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               156, 21
               

               Conread position:
               235-612
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               276
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               14, 147
               

               Conread position:
               245-614
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               248-538
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               44, 63
               

               Conread position:
               248-591
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 40
               

               Conread position:
               282-595
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               14, 222
               

               Conread position:
               282-614
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 291
               

               Conread position:
               282-614
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               14, 216
               

               Conread position:
               285-612
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               244
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               11, 71
               

               Conread position:
               287-515
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               7, 62
               

               Conread position:
               288-612
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               241
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               79, 119
               

               Conread position:
               290-586
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               13, 209
               

               Conread position:
               292-457
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               123, 85
               

               Conread position:
               292-458
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               120, 56
               

               Conread position:
               292-458
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               120, 52
               

               Conread position:
               292-525
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               177
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               81, 167
               

               Conread position:
               292-538
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               120, 46
               

               Conread position:
               292-538
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               106, 69
               

               Conread position:
               292-596
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 200
               

               Conread position:
               292-605
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               48, 130
               

               Conread position:
               292-605
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               120, 229
               

               Conread position:
               292-610
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               88, 225
               

               Conread position:
               292-611
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               114, 12
               

               Conread position:
               292-613
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 46
               

               Conread position:
               292-614
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               120, 47
               

               Conread position:
               292-614
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               240
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               69, 91
               

               Conread position:
               292-614
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 141
               

               Conread position:
               292-614
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 234
               

               Conread position:
               293-536
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               74, 193
               

               Conread position:
               293-547
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               293-614
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 62
               

               Conread position:
               296-601
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               82, 163
               

               Conread position:
               296-614
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               237
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               71, 87
               

               Conread position:
               300-611
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               231
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               80, 199
               

               Conread position:
               303-555
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               58, 189
               

               Conread position:
               309-559
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               61, 185
               

               Conread position:
               313-606
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               54, 83
               

               Conread position:
               315-614
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               222
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               28, 40
               

               Conread position:
               316-614
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               45, 202
               

               Conread position:
               322-614
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               37, 33
               

               Conread position:
               326-599
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               45, 169
               

               Conread position:
               327-492
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               40, 142
               

               Conread position:
               329-612
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               51, 24
               

               Conread position:
               330-610
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               214
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               330-614
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               50, 25
               

               Conread position:
               333-602
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               28, 69
               

               Conread position:
               348-614
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               5, 50
               

               Conread position:
               359-613
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               58, 141
               

               Conread position:
               362-611
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               51, 21
               

               Conread position:
               362-614
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               49, 131
               

               Conread position:
               363-614
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               53, 99
               

               Conread position:
               363-614
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               49, 15
               

               Conread position:
               364-540
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               49, 126
               

               Conread position:
               365-614
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               47, 22
               

               Conread position:
               365-614
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               41, 133
               

               Conread position:
               366-614
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               26, 97
               

               Conread position:
               369-611
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               48, 6
               

               Conread position:
               374-598
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               36, 25
               

               Conread position:
               378-614
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               29, 112
               

               Conread position:
               378-614
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               34, 127
               

               Conread position:
               388-614
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               70, 24
               

               Conread position:
               389-528
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               395-614
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               22, 165
               

               Conread position:
               411-614
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               42, 86
               

               Conread position:
               413-614
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               46, 81
               

               Conread position:
               414-614
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               116, 54
               

               Conread position:
               477-614
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               50, 12
               
Show alignments to all cow chromosomes.