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Cow genome map

           
Conread name:
           
rthg11_h16.y1
        

               
Conread position:
               
162-614
               

               
Cow position:
               
chr9:23388295-23388739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 97
               

               
Conread position:
               
164-612
               

               
Cow position:
               
chr9:28747143-28747585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 80
               

               
Conread position:
               
168-613
               

               
Cow position:
               
chr9:5501225-5500787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 47
               

               
Conread position:
               
168-614
               

               
Cow position:
               
chr9:5510102-5509658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 77
               

               
Conread position:
               
170-602
               

               
Cow position:
               
chr9:63746177-63745760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
236, 74
               

               
Conread position:
               
171-456
               

               
Cow position:
               
chr9:1984131-1984432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
96, 172
               

               
Conread position:
               
171-458
               

               
Cow position:
               
chr9:20393753-20394027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
91, 102
               

               
Conread position:
               
171-459
               

               
Cow position:
               
chr9:20681034-20681315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
78, 88
               

               
Conread position:
               
171-486
               

               
Cow position:
               
chr9:55651399-55651097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
122, 73
               

               
Conread position:
               
171-507
               

               
Cow position:
               
chr9:42998087-42998431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
97, 74
               

               
Conread position:
               
171-509
               

               
Cow position:
               
chr9:57950956-57951290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
239, 38
               

               
Conread position:
               
171-522
               

               
Cow position:
               
chr9:32812720-32812374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
190, 14
               

               
Conread position:
               
171-536
               

               
Cow position:
               
chr9:28773492-28773131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 74
               

               
Conread position:
               
171-538
               

               
Cow position:
               
chr9:1951895-1952262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 78
               

               
Conread position:
               
171-559
               

               
Cow position:
               
chr9:9516396-9516779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 78
               

               
Conread position:
               
171-591
               

               
Cow position:
               
chr9:38961062-38961474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 78
               

               
Conread position:
               
171-593
               

               
Cow position:
               
chr9:24726304-24726711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
125, 26
               

               
Conread position:
               
171-595
               

               
Cow position:
               
chr9:5161699-5162098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
92, 73
               

               
Conread position:
               
171-596
               

               
Cow position:
               
chr9:62442656-62442241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
83, 66
               

               
Conread position:
               
171-598
               

               
Cow position:
               
chr9:35375796-35375375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 74
               

               
Conread position:
               
171-602
               

               
Cow position:
               
chr9:8534311-8534745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 75
               

               
Conread position:
               
171-602
               

               
Cow position:
               
chr9:9461284-9461712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 44
               

               
Conread position:
               
171-605
               

               
Cow position:
               
chr9:7634639-7634213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 49
               

               
Conread position:
               
171-605
               

               
Cow position:
               
chr9:11313139-11313568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
78, 82
               

               
Conread position:
               
171-605
               

               
Cow position:
               
chr9:30402042-30402483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
61, 77
               

               
Conread position:
               
171-605
               

               
Cow position:
               
chr9:44831682-44832110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 74
               

               
Conread position:
               
171-606
               

               
Cow position:
               
chr9:824330-823903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
88, 102
               

               
Conread position:
               
171-611
               

               
Cow position:
               
chr9:17410814-17411257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 74
               

               
Conread position:
               
171-611
               

               
Cow position:
               
chr9:22443239-22443691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
46, 71
               

               
Conread position:
               
171-612
               

               
Cow position:
               
chr9:20848312-20847870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 43
               

               
Conread position:
               
171-612
               

               
Cow position:
               
chr9:37069176-37069624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 308
               

               
Conread position:
               
171-612
               

               
Cow position:
               
chr9:59386405-59386834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 74
               

               
Conread position:
               
171-614
               

               
Cow position:
               
chr9:1520354-1520807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 74
               

               
Conread position:
               
171-614
               

               
Cow position:
               
chr9:6192089-6192527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 44
               

               
Conread position:
               
171-614
               

               
Cow position:
               
chr9:16300193-16300636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 74
               

               
Conread position:
               
171-614
               

               
Cow position:
               
chr9:18381235-18380798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 96
               

               
Conread position:
               
171-614
               

               
Cow position:
               
chr9:22433568-22433995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
248, 101
               

               
Conread position:
               
171-614
               

               
Cow position:
               
chr9:26057077-26057497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
195, 74
               

               
Conread position:
               
171-614
               

               
Cow position:
               
chr9:30477407-30477841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 129
               

               
Conread position:
               
171-614
               

               
Cow position:
               
chr9:33823466-33823051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 74
               

               
Conread position:
               
171-614
               

               
Cow position:
               
chr9:34310409-34309962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
190, 72
               

               
Conread position:
               
171-614
               

               
Cow position:
               
chr9:41680107-41679680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 14
               

               
Conread position:
               
171-614
               

               
Cow position:
               
chr9:44466974-44467406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 77
               

               
Conread position:
               
171-614
               

               
Cow position:
               
chr9:61997222-61997670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 22
               

               
Conread position:
               
171-614
               

               
Cow position:
               
chr9:64092061-64091613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 63
               

               
Conread position:
               
172-484
               

               
Cow position:
               
chr9:53608020-53608334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
199, 73
               

               
Conread position:
               
172-513
               

               
Cow position:
               
chr9:26391138-26390802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
195, 73
               

               
Conread position:
               
172-521
               

               
Cow position:
               
chr9:18002578-18002928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 48
               

               
Conread position:
               
172-614
               

               
Cow position:
               
chr9:19903426-19903015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
355, 72
               

               
Conread position:
               
172-614
               

               
Cow position:
               
chr9:31078710-31079147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 51
               

               
Conread position:
               
172-614
               

               
Cow position:
               
chr9:42445599-42446050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 94
               

               
Conread position:
               
172-614
               

               
Cow position:
               
chr9:50080672-50081107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 73
               

               
Conread position:
               
173-524
               

               
Cow position:
               
chr9:34000239-34000597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
98, 71
               

               
Conread position:
               
173-540
               

               
Cow position:
               
chr9:30138517-30138141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 220
               

               
Conread position:
               
173-600
               

               
Cow position:
               
chr9:28726358-28726777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 18
               

               
Conread position:
               
173-611
               

               
Cow position:
               
chr9:7410155-7409699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 69
               

               
Conread position:
               
173-614
               

               
Cow position:
               
chr9:3220492-3220069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
194, 76
               

               
Conread position:
               
173-614
               

               
Cow position:
               
chr9:13205197-13205633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 72
               

               
Conread position:
               
173-614
               

               
Cow position:
               
chr9:17740572-17741008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 71
               

               
Conread position:
               
173-614
               

               
Cow position:
               
chr9:20416135-20416573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 70
               

               
Conread position:
               
173-614
               

               
Cow position:
               
chr9:29006940-29006490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 100
               

               
Conread position:
               
173-614
               

               
Cow position:
               
chr9:31347326-31346883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 72
               

               
Conread position:
               
174-605
               

               
Cow position:
               
chr9:5763258-5763689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 74
               

               
Conread position:
               
174-614
               

               
Cow position:
               
chr9:9552457-9552023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 86
               

               
Conread position:
               
175-540
               

               
Cow position:
               
chr9:10092025-10092388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
49, 29
               

               
Conread position:
               
176-602
               

               
Cow position:
               
chr9:26404159-26403730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 69
               

               
Conread position:
               
177-612
               

               
Cow position:
               
chr9:9443223-9443666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 101
               

               
Conread position:
               
177-614
               

               
Cow position:
               
chr9:21888538-21888103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 43
               

               
Conread position:
               
177-614
               

               
Cow position:
               
chr9:55322020-55321570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
71, 38
               

               
Conread position:
               
178-614
               

               
Cow position:
               
chr9:6880136-6879712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 82
               

               
Conread position:
               
180-460
               

               
Cow position:
               
chr9:22440138-22440420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 143
               

               
Conread position:
               
183-545
               

               
Cow position:
               
chr9:54997663-54998028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
41, 10
               

               
Conread position:
               
183-614
               

               
Cow position:
               
chr9:56773442-56773009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
192, 60
               

               
Conread position:
               
185-581
               

               
Cow position:
               
chr9:21030678-21030274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
111, 60
               

               
Conread position:
               
188-614
               

               
Cow position:
               
chr9:43871330-43870908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 55
               

               
Conread position:
               
198-538
               

               
Cow position:
               
chr9:38344243-38343895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 51
               

               
Conread position:
               
204-611
               

               
Cow position:
               
chr9:5218838-5219236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 45
               

               
Conread position:
               
219-483
               

               
Cow position:
               
chr9:5393377-5393109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
80, 26
               

               
Conread position:
               
220-600
               

               
Cow position:
               
chr9:5226839-5227225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 25
               

               
Conread position:
               
223-614
               

               
Cow position:
               
chr9:15805598-15805989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 22
               

               
Conread position:
               
223-614
               

               
Cow position:
               
chr9:26278835-26279236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 202
               

               
Conread position:
               
228-611
               

               
Cow position:
               
chr9:50976928-50977317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
139, 17
               

               
Conread position:
               
236-614
               

               
Cow position:
               
chr9:33598303-33597919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 259
               

               
Conread position:
               
240-605
               

               
Cow position:
               
chr9:26344676-26345026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
36, 13
               

               
Conread position:
               
240-613
               

               
Cow position:
               
chr9:5327574-5327192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 155
               

               
Conread position:
               
248-582
               

               
Cow position:
               
chr9:35850205-35849868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 8
               

               
Conread position:
               
248-584
               

               
Cow position:
               
chr9:10011105-10010773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
6, 26
               

               
Conread position:
               
261-456
               

               
Cow position:
               
chr9:38875282-38875483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
106, 28
               

               
Conread position:
               
282-515
               

               
Cow position:
               
chr9:60037929-60037682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
15, 78
               

               
Conread position:
               
282-524
               

               
Cow position:
               
chr9:5532226-5531968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
282-575
               

               
Cow position:
               
chr9:9416133-9416423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 81
               

               
Conread position:
               
282-612
               

               
Cow position:
               
chr9:29684419-29684079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
64, 83
               

               
Conread position:
               
282-612
               

               
Cow position:
               
chr9:51204995-51204662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 14
               

               
Conread position:
               
282-614
               

               
Cow position:
               
chr9:24887471-24887139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
69, 14
               

               
Conread position:
               
282-614
               

               
Cow position:
               
chr9:44914822-44915164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 82
               

               
Conread position:
               
282-614
               

               
Cow position:
               
chr9:55287617-55287956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 191
               

               
Conread position:
               
282-614
               

               
Cow position:
               
chr9:59013061-59013406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
14, 73
               

               
Conread position:
               
283-611
               

               
Cow position:
               
chr9:22696489-22696159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
12, 80
               

               
Conread position:
               
286-507
               

               
Cow position:
               
chr9:41653059-41652826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
10, 203
               

               
Conread position:
               
287-612
               

               
Cow position:
               
chr9:28354802-28354452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
288-612
               

               
Cow position:
               
chr9:54681770-54681444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
8, 94
               

               
Conread position:
               
289-614
               

               
Cow position:
               
chr9:34374664-34374991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 56
               

               
Conread position:
               
291-614
               

               
Cow position:
               
chr9:13169405-13169730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
121, 100
               

               
Conread position:
               
292-456
               

               
Cow position:
               
chr9:4128522-4128690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
292-456
               

               
Cow position:
               
chr9:23541156-23541314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
127, 69
               

               
Conread position:
               
292-456
               

               
Cow position:
               
chr9:61846888-61847057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
292-460
               

               
Cow position:
               
chr9:20318815-20318990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
114, 69
               

               
Conread position:
               
292-492
               

               
Cow position:
               
chr9:34919004-34919210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
77, 115
               

               
Conread position:
               
292-496
               

               
Cow position:
               
chr9:43912191-43911979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
73, 114
               

               
Conread position:
               
292-528
               

               
Cow position:
               
chr9:40542376-40542142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
117, 62
               

               
Conread position:
               
292-576
               

               
Cow position:
               
chr9:36827387-36827106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 59
               

               
Conread position:
               
292-601
               

               
Cow position:
               
chr9:22151825-22152139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
75, 91
               

               
Conread position:
               
292-612
               

               
Cow position:
               
chr9:20091300-20090981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 21
               

               
Conread position:
               
292-613
               

               
Cow position:
               
chr9:34287056-34286733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 49
               

               
Conread position:
               
292-614
               

               
Cow position:
               
chr9:17871845-17872177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 93
               

               
Conread position:
               
292-614
               

               
Cow position:
               
chr9:18342984-18342666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 12
               

               
Conread position:
               
292-614
               

               
Cow position:
               
chr9:34468331-34468646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 29
               

               
Conread position:
               
292-614
               

               
Cow position:
               
chr9:55084035-55084368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 120
               

               
Conread position:
               
293-612
               

               
Cow position:
               
chr9:26086328-26085993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
68, 272
               

               
Conread position:
               
293-614
               

               
Cow position:
               
chr9:54716361-54716669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
121, 20
               

               
Conread position:
               
294-601
               

               
Cow position:
               
chr9:9823260-9823560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
121, 60
               

               
Conread position:
               
303-590
               

               
Cow position:
               
chr9:61544900-61544611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
77, 96
               

               
Conread position:
               
303-614
               

               
Cow position:
               
chr9:50139532-50139218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
103, 62
               

               
Conread position:
               
305-614
               

               
Cow position:
               
chr9:33119633-33119955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 204
               

               
Conread position:
               
310-596
               

               
Cow position:
               
chr9:766906-767200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
52, 210
               

               
Conread position:
               
310-612
               

               
Cow position:
               
chr9:49710088-49709782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
57, 161
               

               
Conread position:
               
313-614
               

               
Cow position:
               
chr9:8563082-8562755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
58, 269
               

               
Conread position:
               
314-611
               

               
Cow position:
               
chr9:6840251-6839929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
51, 269
               

               
Conread position:
               
317-614
               

               
Cow position:
               
chr9:45141368-45141667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 83
               

               
Conread position:
               
321-614
               

               
Cow position:
               
chr9:4267747-4268049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 239
               

               
Conread position:
               
323-537
               

               
Cow position:
               
chr9:32711163-32710940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
20, 172
               

               
Conread position:
               
325-522
               

               
Cow position:
               
chr9:50667653-50667446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
41, 173
               

               
Conread position:
               
334-523
               

               
Cow position:
               
chr9:1879596-1879404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
33, 163
               

               
Conread position:
               
334-581
               

               
Cow position:
               
chr9:1938346-1938096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
117, 46
               

               
Conread position:
               
334-611
               

               
Cow position:
               
chr9:42062336-42062035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 193
               

               
Conread position:
               
335-524
               

               
Cow position:
               
chr9:6117928-6118126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
29, 165
               

               
Conread position:
               
339-605
               

               
Cow position:
               
chr9:11123277-11123541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
119, 22
               

               
Conread position:
               
341-614
               

               
Cow position:
               
chr9:17518278-17518556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
65, 153
               

               
Conread position:
               
345-537
               

               
Cow position:
               
chr9:8920207-8919999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
348-602
               

               
Cow position:
               
chr9:17799828-17799570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
65, 6
               

               
Conread position:
               
348-614
               

               
Cow position:
               
chr9:19493262-19493533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
69, 6
               

               
Conread position:
               
352-614
               

               
Cow position:
               
chr9:11168931-11168663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
11, 142
               

               
Conread position:
               
357-614
               

               
Cow position:
               
chr9:60027392-60027130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
97, 60
               

               
Conread position:
               
361-613
               

               
Cow position:
               
chr9:51720710-51720963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
14, 135
               

               
Conread position:
               
363-613
               

               
Cow position:
               
chr9:30124109-30123863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
49, 176
               

               
Conread position:
               
363-614
               

               
Cow position:
               
chr9:19555563-19555309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
33, 201
               

               
Conread position:
               
363-614
               

               
Cow position:
               
chr9:48628216-48627961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
49, 69
               

               
Conread position:
               
363-614
               

               
Cow position:
               
chr9:61303192-61302933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
54, 203
               

               
Conread position:
               
365-614
               

               
Cow position:
               
chr9:19067964-19067717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
47, 78
               

               
Conread position:
               
365-614
               

               
Cow position:
               
chr9:49417174-49416920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
49, 124
               

               
Conread position:
               
369-614
               

               
Cow position:
               
chr9:12910216-12910468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
17, 130
               

               
Conread position:
               
370-614
               

               
Cow position:
               
chr9:8901042-8901293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
43, 23
               

               
Conread position:
               
373-611
               

               
Cow position:
               
chr9:49292970-49293207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
39, 10
               

               
Conread position:
               
374-612
               

               
Cow position:
               
chr9:50543246-50543493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 29
               

               
Conread position:
               
377-530
               

               
Cow position:
               
chr9:4323983-4324141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 116
               

               
Conread position:
               
392-614
               

               
Cow position:
               
chr9:39011317-39011536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
20, 60
               

               
Conread position:
               
396-612
               

               
Cow position:
               
chr9:33114501-33114281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 154
               

               
Conread position:
               
412-611
               

               
Cow position:
               
chr9:26310640-26310442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
115, 49
               

               
Conread position:
               
413-605
               

               
Cow position:
               
chr9:40005612-40005416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
35, 82
               

               
Conread position:
               
413-613
               

               
Cow position:
               
chr9:41486104-41486308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
45, 143
               

               
Conread position:
               
413-614
               

               
Cow position:
               
chr9:6596098-6596297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
45, 80
               

               
Conread position:
               
413-614
               

               
Cow position:
               
chr9:34284084-34283886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
93, 74
               

               
Conread position:
               
424-614
               

               
Cow position:
               
chr9:21080684-21080496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
36, 66
               

               
Conread position:
               
425-614
               

               
Cow position:
               
chr9:9686296-9686479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
434-614
               

               
Cow position:
               
chr9:28754929-28754750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
93, 22
               

               
Conread position:
               
438-614
               

               
Cow position:
               
chr9:23955872-23956047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
89, 30
               

               
Conread position:
               
448-614
               

               
Cow position:
               
chr9:29194925-29195091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
79, 113
               

               
Conread position:
               
458-614
               

               
Cow position:
               
chr9:34024788-34024632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
72, 102
               
Show alignments to all cow chromosomes.