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Cow genome map

           
Conread name:
           
rthg20_o8.y1
        

               
Conread position:
               
28-397
               

               
Cow position:
               
chr15:27281296-27280951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 79
               

               
Conread position:
               
30-409
               

               
Cow position:
               
chr15:26752584-26752929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
18, 74
               

               
Conread position:
               
41-250
               

               
Cow position:
               
chr15:10230847-10231043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
124, 65
               

               
Conread position:
               
44-411
               

               
Cow position:
               
chr15:50302619-50302248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 62
               

               
Conread position:
               
44-419
               

               
Cow position:
               
chr15:23567709-23568070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 35
               

               
Conread position:
               
46-310
               

               
Cow position:
               
chr15:24821968-24822212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
46-323
               

               
Cow position:
               
chr15:23798107-23798376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
106, 52
               

               
Conread position:
               
46-411
               

               
Cow position:
               
chr15:19771550-19771198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
93, 18
               

               
Conread position:
               
47-272
               

               
Cow position:
               
chr15:29542411-29542201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
47-281
               

               
Cow position:
               
chr15:12359671-12359441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
13, 61
               

               
Conread position:
               
47-305
               

               
Cow position:
               
chr15:13669491-13669731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
47-310
               

               
Cow position:
               
chr15:5658576-5658326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
59, 77
               

               
Conread position:
               
47-313
               

               
Cow position:
               
chr15:28039166-28038920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
59, 78
               

               
Conread position:
               
47-318
               

               
Cow position:
               
chr15:41087449-41087705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
59, 77
               

               
Conread position:
               
47-327
               

               
Cow position:
               
chr15:28924355-28924616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
59, 79
               

               
Conread position:
               
47-328
               

               
Cow position:
               
chr15:14879587-14879855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 80
               

               
Conread position:
               
47-330
               

               
Cow position:
               
chr15:9267649-9267906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
47-342
               

               
Cow position:
               
chr15:9062162-9062462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
57, 127
               

               
Conread position:
               
47-348
               

               
Cow position:
               
chr15:4676592-4676882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
101, 59
               

               
Conread position:
               
47-348
               

               
Cow position:
               
chr15:51822556-51822269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
101, 60
               

               
Conread position:
               
47-349
               

               
Cow position:
               
chr15:9072017-9072303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
251, 57
               

               
Conread position:
               
47-349
               

               
Cow position:
               
chr15:33314033-33314322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
97, 54
               

               
Conread position:
               
47-353
               

               
Cow position:
               
chr15:23332449-23332754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
42, 127
               

               
Conread position:
               
47-355
               

               
Cow position:
               
chr15:22168477-22168178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 54
               

               
Conread position:
               
47-364
               

               
Cow position:
               
chr15:4485558-4485253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
101, 58
               

               
Conread position:
               
47-364
               

               
Cow position:
               
chr15:22532652-22532347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 50
               

               
Conread position:
               
47-385
               

               
Cow position:
               
chr15:33303774-33303415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
59, 135
               

               
Conread position:
               
47-401
               

               
Cow position:
               
chr15:5498615-5498958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 80
               

               
Conread position:
               
47-401
               

               
Cow position:
               
chr15:10456586-10456938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 41
               

               
Conread position:
               
47-401
               

               
Cow position:
               
chr15:43030608-43030951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
107, 59
               

               
Conread position:
               
47-402
               

               
Cow position:
               
chr15:24285402-24285054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
250, 59
               

               
Conread position:
               
47-407
               

               
Cow position:
               
chr15:16616607-16616270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
217, 39
               

               
Conread position:
               
47-408
               

               
Cow position:
               
chr15:25208353-25208688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 42
               

               
Conread position:
               
47-409
               

               
Cow position:
               
chr15:3699870-3700221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 59
               

               
Conread position:
               
47-409
               

               
Cow position:
               
chr15:13554753-13554421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
60, 27
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr15:5234591-5234935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
288, 59
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr15:5728052-5727716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
106, 57
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr15:6530424-6530782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 60
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr15:10336165-10335821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 58
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr15:14505841-14505496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 74
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr15:15707705-15708048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 57
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr15:20352253-20351898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
59, 80
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr15:21832010-21832370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 59
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr15:24044678-24045033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 54
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr15:24797387-24797744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr15:25110753-25111106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
232, 59
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr15:30047122-30047480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 59
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr15:33306520-33306176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 58
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr15:46611332-46610998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
234, 59
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr15:52611746-52611373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 128
               

               
Conread position:
               
47-413
               

               
Cow position:
               
chr15:17869880-17870217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
59, 77
               

               
Conread position:
               
47-413
               

               
Cow position:
               
chr15:46868295-46868651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 50
               

               
Conread position:
               
47-417
               

               
Cow position:
               
chr15:19119203-19119550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
232, 59
               

               
Conread position:
               
47-417
               

               
Cow position:
               
chr15:36392077-36391735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
170, 58
               

               
Conread position:
               
47-418
               

               
Cow position:
               
chr15:22759457-22759098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
225, 59
               

               
Conread position:
               
47-419
               

               
Cow position:
               
chr15:10827409-10827769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
116, 59
               

               
Conread position:
               
47-419
               

               
Cow position:
               
chr15:16583298-16583635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
59, 77
               

               
Conread position:
               
47-419
               

               
Cow position:
               
chr15:21388757-21389110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 47
               

               
Conread position:
               
47-420
               

               
Cow position:
               
chr15:14856036-14856409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
72, 94
               

               
Conread position:
               
47-421
               

               
Cow position:
               
chr15:16112816-16112457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 59
               

               
Conread position:
               
47-421
               

               
Cow position:
               
chr15:19403389-19403050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
231, 59
               

               
Conread position:
               
47-421
               

               
Cow position:
               
chr15:20458886-20459251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
59, 80
               

               
Conread position:
               
47-421
               

               
Cow position:
               
chr15:20472132-20472491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 59
               

               
Conread position:
               
47-421
               

               
Cow position:
               
chr15:36781895-36782268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
59, 173
               

               
Conread position:
               
47-421
               

               
Cow position:
               
chr15:43626872-43626526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
231, 57
               

               
Conread position:
               
47-422
               

               
Cow position:
               
chr15:20370058-20370397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
288, 23
               

               
Conread position:
               
47-425
               

               
Cow position:
               
chr15:32979620-32979981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
59, 79
               

               
Conread position:
               
47-446
               

               
Cow position:
               
chr15:13387495-13387111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
288, 59
               

               
Conread position:
               
47-508
               

               
Cow position:
               
chr15:16640197-16639771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
99, 59
               

               
Conread position:
               
47-518
               

               
Cow position:
               
chr15:143820-144264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 50
               

               
Conread position:
               
47-518
               

               
Cow position:
               
chr15:7191848-7192278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
47-518
               

               
Cow position:
               
chr15:33976279-33976711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
119, 59
               

               
Conread position:
               
47-518
               

               
Cow position:
               
chr15:40999638-41000086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 80
               

               
Conread position:
               
47-518
               

               
Cow position:
               
chr15:51632631-51633074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
59, 80
               

               
Conread position:
               
47-521
               

               
Cow position:
               
chr15:28177891-28177435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
74, 120
               

               
Conread position:
               
48-308
               

               
Cow position:
               
chr15:21903030-21903278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
90, 58
               

               
Conread position:
               
48-401
               

               
Cow position:
               
chr15:39082612-39082286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
315, 58
               

               
Conread position:
               
48-413
               

               
Cow position:
               
chr15:16604232-16603882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
230, 60
               

               
Conread position:
               
48-421
               

               
Cow position:
               
chr15:442235-441873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
96, 58
               

               
Conread position:
               
49-313
               

               
Cow position:
               
chr15:20534038-20534288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
99, 54
               

               
Conread position:
               
49-333
               

               
Cow position:
               
chr15:16778739-16778466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
223, 57
               

               
Conread position:
               
49-333
               

               
Cow position:
               
chr15:20267052-20266779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
105, 57
               

               
Conread position:
               
49-349
               

               
Cow position:
               
chr15:53183167-53183451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
57, 77
               

               
Conread position:
               
49-363
               

               
Cow position:
               
chr15:5640034-5639730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
57, 35
               

               
Conread position:
               
49-408
               

               
Cow position:
               
chr15:5938837-5938490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
99, 57
               

               
Conread position:
               
49-410
               

               
Cow position:
               
chr15:34104678-34104324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
105, 57
               

               
Conread position:
               
49-410
               

               
Cow position:
               
chr15:50957383-50957733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
221, 56
               

               
Conread position:
               
49-411
               

               
Cow position:
               
chr15:6226785-6227116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
49-411
               

               
Cow position:
               
chr15:6905964-6905599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 58
               

               
Conread position:
               
49-415
               

               
Cow position:
               
chr15:6163556-6163205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
223, 57
               

               
Conread position:
               
49-418
               

               
Cow position:
               
chr15:11270207-11270565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
95, 57
               

               
Conread position:
               
49-419
               

               
Cow position:
               
chr15:28752-28393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
95, 57
               

               
Conread position:
               
49-419
               

               
Cow position:
               
chr15:20390291-20390654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
57, 45
               

               
Conread position:
               
49-421
               

               
Cow position:
               
chr15:31202417-31202071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
105, 57
               

               
Conread position:
               
49-421
               

               
Cow position:
               
chr15:42143262-42142916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
23, 58
               

               
Conread position:
               
49-423
               

               
Cow position:
               
chr15:16543052-16543394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
104, 60
               

               
Conread position:
               
49-425
               

               
Cow position:
               
chr15:36435617-36435258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
223, 13
               

               
Conread position:
               
49-427
               

               
Cow position:
               
chr15:39490239-39490605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
57, 77
               

               
Conread position:
               
49-445
               

               
Cow position:
               
chr15:4788549-4788935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
100, 57
               

               
Conread position:
               
49-455
               

               
Cow position:
               
chr15:35838674-35839068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
229, 57
               

               
Conread position:
               
50-333
               

               
Cow position:
               
chr15:7841878-7842152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
48, 58
               

               
Conread position:
               
50-339
               

               
Cow position:
               
chr15:32611381-32611660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
222, 56
               

               
Conread position:
               
50-364
               

               
Cow position:
               
chr15:44829535-44829840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
103, 56
               

               
Conread position:
               
50-371
               

               
Cow position:
               
chr15:20414131-20414444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
222, 56
               

               
Conread position:
               
50-372
               

               
Cow position:
               
chr15:33662905-33662601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
56, 77
               

               
Conread position:
               
50-378
               

               
Cow position:
               
chr15:15233992-15233677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
56, 77
               

               
Conread position:
               
50-387
               

               
Cow position:
               
chr15:18720725-18720399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
56, 76
               

               
Conread position:
               
50-421
               

               
Cow position:
               
chr15:608567-608203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
56, 70
               

               
Conread position:
               
50-421
               

               
Cow position:
               
chr15:6152076-6151718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
228, 56
               

               
Conread position:
               
50-445
               

               
Cow position:
               
chr15:13515780-13515401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 56
               

               
Conread position:
               
50-446
               

               
Cow position:
               
chr15:19733773-19733393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
285, 56
               

               
Conread position:
               
50-455
               

               
Cow position:
               
chr15:45009-45397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
51-387
               

               
Cow position:
               
chr15:23531133-23530809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
148, 55
               

               
Conread position:
               
53-258
               

               
Cow position:
               
chr15:32690516-32690710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
53-319
               

               
Cow position:
               
chr15:33605329-33605079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
261, 52
               

               
Conread position:
               
53-319
               

               
Cow position:
               
chr15:34255334-34255586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
53-385
               

               
Cow position:
               
chr15:43827368-43827680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
95, 44
               

               
Conread position:
               
53-391
               

               
Cow position:
               
chr15:24968195-24967874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
202, 53
               

               
Conread position:
               
53-397
               

               
Cow position:
               
chr15:49738639-49738961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
53, 73
               

               
Conread position:
               
53-409
               

               
Cow position:
               
chr15:46563069-46563416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 53
               

               
Conread position:
               
53-411
               

               
Cow position:
               
chr15:47842858-47843185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
292, 53
               

               
Conread position:
               
53-411
               

               
Cow position:
               
chr15:47990354-47990705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
101, 53
               

               
Conread position:
               
53-414
               

               
Cow position:
               
chr15:23486765-23487106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
95, 53
               

               
Conread position:
               
53-443
               

               
Cow position:
               
chr15:15041026-15041387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
53, 73
               

               
Conread position:
               
53-445
               

               
Cow position:
               
chr15:17196553-17196183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
96, 53
               

               
Conread position:
               
53-455
               

               
Cow position:
               
chr15:43248344-43248749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
63, 101
               

               
Conread position:
               
55-401
               

               
Cow position:
               
chr15:28126643-28126969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
51, 71
               

               
Conread position:
               
55-411
               

               
Cow position:
               
chr15:25666809-25667156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
99, 51
               

               
Conread position:
               
55-411
               

               
Cow position:
               
chr15:41418405-41418767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
190, 51
               

               
Conread position:
               
55-411
               

               
Cow position:
               
chr15:47042219-47042563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 71
               

               
Conread position:
               
55-421
               

               
Cow position:
               
chr15:30820417-30820780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
53, 110
               

               
Conread position:
               
57-402
               

               
Cow position:
               
chr15:48487048-48486708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
75, 48
               

               
Conread position:
               
57-421
               

               
Cow position:
               
chr15:1298151-1297796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
26, 7
               

               
Conread position:
               
59-305
               

               
Cow position:
               
chr15:30316184-30316422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
241, 48
               

               
Conread position:
               
59-411
               

               
Cow position:
               
chr15:45479409-45479068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
47, 67
               

               
Conread position:
               
62-315
               

               
Cow position:
               
chr15:18284641-18284398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
216, 44
               

               
Conread position:
               
62-353
               

               
Cow position:
               
chr15:5571237-5571517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
44, 65
               

               
Conread position:
               
62-409
               

               
Cow position:
               
chr15:11011190-11011535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
43, 114
               

               
Conread position:
               
63-421
               

               
Cow position:
               
chr15:4138533-4138189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
210, 43
               

               
Conread position:
               
65-445
               

               
Cow position:
               
chr15:25584693-25585055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
41, 62
               

               
Conread position:
               
65-513
               

               
Cow position:
               
chr15:41583312-41582869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 41
               

               
Conread position:
               
72-420
               

               
Cow position:
               
chr15:41619783-41620133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
26, 93
               

               
Conread position:
               
73-345
               

               
Cow position:
               
chr15:7827641-7827907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
77, 15
               

               
Conread position:
               
77-411
               

               
Cow position:
               
chr15:16307800-16307488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
78-388
               

               
Cow position:
               
chr15:11362794-11363087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
8, 29
               

               
Conread position:
               
79-353
               

               
Cow position:
               
chr15:24129029-24128773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
69, 35
               

               
Conread position:
               
79-402
               

               
Cow position:
               
chr15:6045933-6046241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
27, 19
               

               
Conread position:
               
80-402
               

               
Cow position:
               
chr15:14871132-14870815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
80-411
               

               
Cow position:
               
chr15:26404650-26404348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
28, 46
               

               
Conread position:
               
83-432
               

               
Cow position:
               
chr15:9177833-9178162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
194, 22
               

               
Conread position:
               
84-423
               

               
Cow position:
               
chr15:16823327-16822988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
11, 86
               

               
Conread position:
               
85-387
               

               
Cow position:
               
chr15:12316311-12316016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
31, 9
               

               
Conread position:
               
85-388
               

               
Cow position:
               
chr15:21523176-21522875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
12, 35
               

               
Conread position:
               
85-420
               

               
Cow position:
               
chr15:44252750-44252418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
91-419
               

               
Cow position:
               
chr15:45323165-45322838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
11, 76
               

               
Conread position:
               
97-421
               

               
Cow position:
               
chr15:9928725-9928416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
240, 7
               

               
Conread position:
               
106-361
               

               
Cow position:
               
chr15:6421999-6421742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
158, 63
               

               
Conread position:
               
106-410
               

               
Cow position:
               
chr15:41360596-41360883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
33, 56
               

               
Conread position:
               
106-411
               

               
Cow position:
               
chr15:6657473-6657163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
10, 62
               

               
Conread position:
               
106-421
               

               
Cow position:
               
chr15:9493926-9494240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
13, 58
               

               
Conread position:
               
106-518
               

               
Cow position:
               
chr15:15573454-15573851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
10, 59
               

               
Conread position:
               
107-421
               

               
Cow position:
               
chr15:21894147-21893835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
43, 60
               

               
Conread position:
               
108-452
               

               
Cow position:
               
chr15:19279728-19280062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
20, 56
               

               
Conread position:
               
110-350
               

               
Cow position:
               
chr15:45245187-45245416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
9, 58
               

               
Conread position:
               
116-455
               

               
Cow position:
               
chr15:22938976-22939298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
19, 27
               

               
Conread position:
               
119-386
               

               
Cow position:
               
chr15:33285236-33284968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
14, 46
               

               
Conread position:
               
119-420
               

               
Cow position:
               
chr15:22713477-22713776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
46, 34
               

               
Conread position:
               
119-421
               

               
Cow position:
               
chr15:1329748-1330046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 33
               

               
Conread position:
               
119-424
               

               
Cow position:
               
chr15:29340415-29340117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
34, 48
               

               
Conread position:
               
120-319
               

               
Cow position:
               
chr15:31283720-31283525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 47
               

               
Conread position:
               
120-327
               

               
Cow position:
               
chr15:241200-240991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
26, 48
               

               
Conread position:
               
120-328
               

               
Cow position:
               
chr15:1702041-1701833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
152, 49
               

               
Conread position:
               
120-333
               

               
Cow position:
               
chr15:11656606-11656393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
34, 48
               

               
Conread position:
               
120-333
               

               
Cow position:
               
chr15:19753635-19753421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
152, 41
               

               
Conread position:
               
120-377
               

               
Cow position:
               
chr15:51831240-51831495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
32, 47
               

               
Conread position:
               
120-378
               

               
Cow position:
               
chr15:22531413-22531161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
73, 24
               

               
Conread position:
               
120-386
               

               
Cow position:
               
chr15:47274725-47274465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
30, 47
               

               
Conread position:
               
120-392
               

               
Cow position:
               
chr15:36621770-36621494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
24, 47
               

               
Conread position:
               
120-398
               

               
Cow position:
               
chr15:34206845-34207115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
30, 47
               

               
Conread position:
               
120-400
               

               
Cow position:
               
chr15:53680416-53680681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 47
               

               
Conread position:
               
120-401
               

               
Cow position:
               
chr15:32204551-32204823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
34, 94
               

               
Conread position:
               
120-409
               

               
Cow position:
               
chr15:40957931-40957644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
214, 44
               

               
Conread position:
               
120-411
               

               
Cow position:
               
chr15:23767913-23768191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
33, 47
               

               
Conread position:
               
120-411
               

               
Cow position:
               
chr15:44051147-44051433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
130, 40
               

               
Conread position:
               
120-411
               

               
Cow position:
               
chr15:51427471-51427760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
120-413
               

               
Cow position:
               
chr15:8962352-8962073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
120-413
               

               
Cow position:
               
chr15:26896360-26896630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
120-415
               

               
Cow position:
               
chr15:37931417-37931702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
33, 43
               

               
Conread position:
               
120-421
               

               
Cow position:
               
chr15:19186263-19186561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
29, 43
               

               
Conread position:
               
120-421
               

               
Cow position:
               
chr15:20482485-20482790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
33, 47
               

               
Conread position:
               
121-387
               

               
Cow position:
               
chr15:17260806-17261070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
151, 35
               

               
Conread position:
               
121-419
               

               
Cow position:
               
chr15:12785787-12785488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
30, 46
               

               
Conread position:
               
121-445
               

               
Cow position:
               
chr15:38806148-38806467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
153, 23
               

               
Conread position:
               
121-518
               

               
Cow position:
               
chr15:7430332-7429954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
27, 46
               

               
Conread position:
               
122-409
               

               
Cow position:
               
chr15:36259241-36259536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
31, 121
               

               
Conread position:
               
122-421
               

               
Cow position:
               
chr15:9871061-9871360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 44
               

               
Conread position:
               
123-409
               

               
Cow position:
               
chr15:27972866-27973149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
26, 44
               

               
Conread position:
               
123-411
               

               
Cow position:
               
chr15:21803308-21803595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
30, 44
               

               
Conread position:
               
125-338
               

               
Cow position:
               
chr15:9520481-9520267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
146, 41
               

               
Conread position:
               
125-368
               

               
Cow position:
               
chr15:33679041-33678809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
223, 37
               

               
Conread position:
               
125-401
               

               
Cow position:
               
chr15:37632528-37632808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
72, 31
               

               
Conread position:
               
125-407
               

               
Cow position:
               
chr15:4535254-4534975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
28, 38
               

               
Conread position:
               
125-408
               

               
Cow position:
               
chr15:17100369-17100641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
153, 27
               

               
Conread position:
               
125-408
               

               
Cow position:
               
chr15:23703120-23702848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 42
               

               
Conread position:
               
125-411
               

               
Cow position:
               
chr15:20725270-20725550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
139, 10
               

               
Conread position:
               
125-411
               

               
Cow position:
               
chr15:26421252-26421536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
157, 27
               

               
Conread position:
               
125-411
               

               
Cow position:
               
chr15:39406081-39405809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
146, 42
               

               
Conread position:
               
125-420
               

               
Cow position:
               
chr15:6491242-6491534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 43
               

               
Conread position:
               
125-421
               

               
Cow position:
               
chr15:6462155-6462440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
30, 42
               

               
Conread position:
               
125-435
               

               
Cow position:
               
chr15:22137030-22136725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
41, 28
               

               
Conread position:
               
125-436
               

               
Cow position:
               
chr15:35642367-35642063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
23, 42
               

               
Conread position:
               
125-443
               

               
Cow position:
               
chr15:40009303-40009622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 43
               

               
Conread position:
               
125-445
               

               
Cow position:
               
chr15:24994181-24994478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
214, 15
               

               
Conread position:
               
125-520
               

               
Cow position:
               
chr15:11658218-11658624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 42
               

               
Conread position:
               
125-521
               

               
Cow position:
               
chr15:2952783-2953153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
156, 41
               

               
Conread position:
               
126-401
               

               
Cow position:
               
chr15:4093579-4093857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
115, 42
               

               
Conread position:
               
126-446
               

               
Cow position:
               
chr15:5730283-5729975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
22, 41
               

               
Conread position:
               
126-518
               

               
Cow position:
               
chr15:38883502-38883133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
24, 41
               

               
Conread position:
               
127-411
               

               
Cow position:
               
chr15:794668-794955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
23, 41
               

               
Conread position:
               
127-434
               

               
Cow position:
               
chr15:27247858-27247546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
23, 36
               

               
Conread position:
               
127-512
               

               
Cow position:
               
chr15:36423000-36422602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 34
               

               
Conread position:
               
128-345
               

               
Cow position:
               
chr15:29792568-29792779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
20, 39
               

               
Conread position:
               
128-455
               

               
Cow position:
               
chr15:6586369-6586698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 40
               

               
Conread position:
               
128-518
               

               
Cow position:
               
chr15:2144788-2145154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
206, 19
               

               
Conread position:
               
131-333
               

               
Cow position:
               
chr15:14020812-14020616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
21, 36
               

               
Conread position:
               
131-411
               

               
Cow position:
               
chr15:16476403-16476673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
18, 37
               

               
Conread position:
               
131-411
               

               
Cow position:
               
chr15:51898565-51898294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
140, 24
               

               
Conread position:
               
131-421
               

               
Cow position:
               
chr15:29604376-29604643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
19, 37
               

               
Conread position:
               
131-421
               

               
Cow position:
               
chr15:40798085-40798370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
18, 30
               

               
Conread position:
               
131-425
               

               
Cow position:
               
chr15:35417281-35417572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
150, 36
               

               
Conread position:
               
131-496
               

               
Cow position:
               
chr15:43913743-43914089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
19, 36
               

               
Conread position:
               
132-401
               

               
Cow position:
               
chr15:8007321-8007056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
144, 20
               

               
Conread position:
               
132-411
               

               
Cow position:
               
chr15:15881273-15880992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
141, 21
               

               
Conread position:
               
132-411
               

               
Cow position:
               
chr15:29810449-29810185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 36
               

               
Conread position:
               
132-433
               

               
Cow position:
               
chr15:39599780-39599489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
22, 35
               

               
Conread position:
               
133-410
               

               
Cow position:
               
chr15:10245670-10245930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
203, 20
               

               
Conread position:
               
136-385
               

               
Cow position:
               
chr15:52778193-52778435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 31
               

               
Conread position:
               
136-397
               

               
Cow position:
               
chr15:15846169-15845916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
235, 25
               

               
Conread position:
               
136-402
               

               
Cow position:
               
chr15:47822135-47821890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
199, 27
               

               
Conread position:
               
136-421
               

               
Cow position:
               
chr15:37381967-37381681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
17, 31
               

               
Conread position:
               
137-351
               

               
Cow position:
               
chr15:30002024-30001809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
81, 29
               

               
Conread position:
               
137-411
               

               
Cow position:
               
chr15:31857927-31857657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
14, 30
               

               
Conread position:
               
138-332
               

               
Cow position:
               
chr15:26158284-26158472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
138-387
               

               
Cow position:
               
chr15:40095176-40095424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
134, 18
               

               
Conread position:
               
139-413
               

               
Cow position:
               
chr15:21421274-21421002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
134, 27
               

               
Conread position:
               
141-349
               

               
Cow position:
               
chr15:45217152-45216947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
142-419
               

               
Cow position:
               
chr15:26573716-26573436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
89, 19
               

               
Conread position:
               
146-342
               

               
Cow position:
               
chr15:33525751-33525551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
90, 20
               

               
Conread position:
               
146-352
               

               
Cow position:
               
chr15:38394745-38394541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
118, 20
               

               
Conread position:
               
146-401
               

               
Cow position:
               
chr15:17763225-17762980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
188, 20
               

               
Conread position:
               
146-411
               

               
Cow position:
               
chr15:47105362-47105107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
188, 20
               

               
Conread position:
               
147-411
               

               
Cow position:
               
chr15:12304965-12304704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
187, 22
               

               
Conread position:
               
147-411
               

               
Cow position:
               
chr15:21908258-21908001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
189, 20
               

               
Conread position:
               
147-411
               

               
Cow position:
               
chr15:50322919-50322660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
188, 19
               

               
Conread position:
               
147-413
               

               
Cow position:
               
chr15:5632996-5632750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
138, 19
               

               
Conread position:
               
148-342
               

               
Cow position:
               
chr15:33243481-33243283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
95, 18
               

               
Conread position:
               
148-418
               

               
Cow position:
               
chr15:26903519-26903247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 18
               

               
Conread position:
               
149-401
               

               
Cow position:
               
chr15:39598560-39598318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
153-387
               

               
Cow position:
               
chr15:52739801-52740036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
111, 79
               

               
Conread position:
               
155-445
               

               
Cow position:
               
chr15:42788835-42789113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
11, 35
               

               
Conread position:
               
158-419
               

               
Cow position:
               
chr15:27900189-27900453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
84, 24
               

               
Conread position:
               
159-409
               

               
Cow position:
               
chr15:47843793-47844025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
164-411
               

               
Cow position:
               
chr15:20390969-20391209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
170, 79
               

               
Conread position:
               
164-425
               

               
Cow position:
               
chr15:11995716-11995974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
107, 43
               

               
Conread position:
               
167-402
               

               
Cow position:
               
chr15:20082066-20081846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
169, 151
               

               
Conread position:
               
168-421
               

               
Cow position:
               
chr15:225498-225747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 142
               

               
Conread position:
               
170-345
               

               
Cow position:
               
chr15:36347072-36346890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
174-397
               

               
Cow position:
               
chr15:24128328-24128108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
66, 8
               

               
Conread position:
               
177-386
               

               
Cow position:
               
chr15:9526172-9526387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
177-411
               

               
Cow position:
               
chr15:11646193-11646426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
158, 13
               

               
Conread position:
               
177-411
               

               
Cow position:
               
chr15:26918977-26919209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
16, 98
               

               
Conread position:
               
178-415
               

               
Cow position:
               
chr15:9622488-9622249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
110, 171
               

               
Conread position:
               
182-401
               

               
Cow position:
               
chr15:34144864-34145078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
96, 50
               

               
Conread position:
               
182-411
               

               
Cow position:
               
chr15:1804037-1804269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
89, 189
               

               
Conread position:
               
182-411
               

               
Cow position:
               
chr15:45585017-45584795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
6, 93
               

               
Conread position:
               
183-419
               

               
Cow position:
               
chr15:44658650-44658417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
95, 29
               

               
Conread position:
               
184-333
               

               
Cow position:
               
chr15:1128285-1128138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
184-411
               

               
Cow position:
               
chr15:1083084-1083310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
151, 9
               

               
Conread position:
               
184-411
               

               
Cow position:
               
chr15:5420593-5420818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
151, 83
               

               
Conread position:
               
184-411
               

               
Cow position:
               
chr15:33643375-33643156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
153, 29
               

               
Conread position:
               
185-411
               

               
Cow position:
               
chr15:49258165-49257930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
58, 149
               

               
Conread position:
               
185-421
               

               
Cow position:
               
chr15:16667211-16667446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
149, 121
               

               
Conread position:
               
185-434
               

               
Cow position:
               
chr15:36773406-36773653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
94, 167
               

               
Conread position:
               
188-411
               

               
Cow position:
               
chr15:16439540-16439765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
82, 135
               

               
Conread position:
               
188-411
               

               
Cow position:
               
chr15:31137176-31137400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
83, 167
               

               
Conread position:
               
188-445
               

               
Cow position:
               
chr15:1722565-1722815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
146, 45
               

               
Conread position:
               
189-401
               

               
Cow position:
               
chr15:24305194-24305406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
146, 85
               

               
Conread position:
               
189-518
               

               
Cow position:
               
chr15:39619442-39619126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
83, 121
               

               
Conread position:
               
191-343
               

               
Cow position:
               
chr15:4861628-4861783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
191-411
               

               
Cow position:
               
chr15:7456979-7456762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
146, 22
               

               
Conread position:
               
191-520
               

               
Cow position:
               
chr15:25907195-25906889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
19, 84
               

               
Conread position:
               
192-411
               

               
Cow position:
               
chr15:38877022-38877238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 89
               

               
Conread position:
               
193-411
               

               
Cow position:
               
chr15:38103610-38103819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
142, 70
               

               
Conread position:
               
193-411
               

               
Cow position:
               
chr15:41125287-41125506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
194-407
               

               
Cow position:
               
chr15:5715831-5715621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
103, 24
               

               
Conread position:
               
195-421
               

               
Cow position:
               
chr15:32323927-32324151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
71, 37
               

               
Conread position:
               
209-411
               

               
Cow position:
               
chr15:275911-275719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
144, 95
               

               
Conread position:
               
209-411
               

               
Cow position:
               
chr15:23696644-23696845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
126, 15
               

               
Conread position:
               
211-411
               

               
Cow position:
               
chr15:23275800-23275608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
211-420
               

               
Cow position:
               
chr15:37205312-37205106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
25, 138
               

               
Conread position:
               
212-520
               

               
Cow position:
               
chr15:12441560-12441887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
86, 74
               

               
Conread position:
               
213-387
               

               
Cow position:
               
chr15:45273271-45273092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
213-518
               

               
Cow position:
               
chr15:16657757-16657457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
66, 150
               

               
Conread position:
               
214-411
               

               
Cow position:
               
chr15:11560251-11560449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
5, 20
               

               
Conread position:
               
214-445
               

               
Cow position:
               
chr15:51374271-51374040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
57, 139
               

               
Conread position:
               
216-421
               

               
Cow position:
               
chr15:36888084-36887892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
134, 93
               

               
Conread position:
               
219-411
               

               
Cow position:
               
chr15:47279882-47280073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
62, 128
               

               
Conread position:
               
221-419
               

               
Cow position:
               
chr15:18671198-18671399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
114, 25
               

               
Conread position:
               
226-419
               

               
Cow position:
               
chr15:10608055-10608249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
109, 144
               

               
Conread position:
               
226-421
               

               
Cow position:
               
chr15:11559106-11559298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
38, 19
               

               
Conread position:
               
226-421
               

               
Cow position:
               
chr15:12655661-12655859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
29, 90
               

               
Conread position:
               
226-432
               

               
Cow position:
               
chr15:33770868-33770658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
228-411
               

               
Cow position:
               
chr15:16261562-16261379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
18, 29
               

               
Conread position:
               
230-401
               

               
Cow position:
               
chr15:53036722-53036895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
104, 37
               

               
Conread position:
               
231-411
               

               
Cow position:
               
chr15:8354289-8354107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
235-411
               

               
Cow position:
               
chr15:3726360-3726190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
236-411
               

               
Cow position:
               
chr15:53716673-53716500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
114, 86
               

               
Conread position:
               
236-425
               

               
Cow position:
               
chr15:286719-286531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
99, 38
               

               
Conread position:
               
242-421
               

               
Cow position:
               
chr15:10512036-10512215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
89, 68
               

               
Conread position:
               
245-400
               

               
Cow position:
               
chr15:13684035-13684191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
249-400
               

               
Cow position:
               
chr15:36353896-36353745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
86, 73
               

               
Conread position:
               
249-407
               

               
Cow position:
               
chr15:36724952-36725108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
86, 99
               

               
Conread position:
               
249-411
               

               
Cow position:
               
chr15:17337586-17337428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
85, 103
               

               
Conread position:
               
250-401
               

               
Cow position:
               
chr15:2380583-2380429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
250-425
               

               
Cow position:
               
chr15:49274178-49274007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
84, 98
               

               
Conread position:
               
257-421
               

               
Cow position:
               
chr15:30470750-30470915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
78, 160
               

               
Conread position:
               
270-520
               

               
Cow position:
               
chr15:51307474-51307709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
65, 8
               

               
Conread position:
               
280-411
               

               
Cow position:
               
chr15:14888444-14888579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
305-445
               

               
Cow position:
               
chr15:16908603-16908468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
309-411
               

               
Cow position:
               
chr15:14988157-14988055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 13
               

               
Conread position:
               
359-520
               

               
Cow position:
               
chr15:15025285-15025138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
430-521
               

               
Cow position:
               
chr15:41056131-41056223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               
Show alignments to all cow chromosomes.