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Cow genome map

           
Conread name:
           
rthg20_o8.y1
        

               
Conread position:
               
25-401
               

               
Cow position:
               
chr19:38596257-38596620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
19, 40
               

               
Conread position:
               
27-424
               

               
Cow position:
               
chr19:8375660-8375278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 102
               

               
Conread position:
               
36-411
               

               
Cow position:
               
chr19:20693139-20693512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 10
               

               
Conread position:
               
41-411
               

               
Cow position:
               
chr19:10171648-10172017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 28
               

               
Conread position:
               
44-261
               

               
Cow position:
               
chr19:39254839-39254634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
105, 11
               

               
Conread position:
               
44-413
               

               
Cow position:
               
chr19:36125249-36125599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 82
               

               
Conread position:
               
44-415
               

               
Cow position:
               
chr19:42205592-42205947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
290, 43
               

               
Conread position:
               
44-418
               

               
Cow position:
               
chr19:33114308-33114671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
104, 62
               

               
Conread position:
               
44-419
               

               
Cow position:
               
chr19:4502867-4503244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
45-517
               

               
Cow position:
               
chr19:14993274-14992804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 102
               

               
Conread position:
               
46-401
               

               
Cow position:
               
chr19:1580917-1580585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
225, 62
               

               
Conread position:
               
47-202
               

               
Cow position:
               
chr19:30551711-30551869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
60, 124
               

               
Conread position:
               
47-232
               

               
Cow position:
               
chr19:19173774-19173955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
47-282
               

               
Cow position:
               
chr19:37633688-37633465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
105, 61
               

               
Conread position:
               
47-284
               

               
Cow position:
               
chr19:14573034-14573262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
118, 59
               

               
Conread position:
               
47-287
               

               
Cow position:
               
chr19:38755962-38756184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
103, 26
               

               
Conread position:
               
47-289
               

               
Cow position:
               
chr19:37654479-37654714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
106, 58
               

               
Conread position:
               
47-306
               

               
Cow position:
               
chr19:46693814-46694058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
60, 70
               

               
Conread position:
               
47-313
               

               
Cow position:
               
chr19:8127981-8128236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
170, 29
               

               
Conread position:
               
47-313
               

               
Cow position:
               
chr19:53463504-53463251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
47-317
               

               
Cow position:
               
chr19:55210812-55210548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
60, 50
               

               
Conread position:
               
47-330
               

               
Cow position:
               
chr19:38396619-38396347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
69, 116
               

               
Conread position:
               
47-333
               

               
Cow position:
               
chr19:7612293-7612555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
47-333
               

               
Cow position:
               
chr19:31873771-31874047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
74, 60
               

               
Conread position:
               
47-345
               

               
Cow position:
               
chr19:27348597-27348325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
47-345
               

               
Cow position:
               
chr19:48409180-48409458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
288, 59
               

               
Conread position:
               
47-347
               

               
Cow position:
               
chr19:20699750-20700038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
101, 51
               

               
Conread position:
               
47-353
               

               
Cow position:
               
chr19:31378951-31378645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 60
               

               
Conread position:
               
47-362
               

               
Cow position:
               
chr19:3489161-3489464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
59, 80
               

               
Conread position:
               
47-371
               

               
Cow position:
               
chr19:54294919-54294613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
59, 79
               

               
Conread position:
               
47-386
               

               
Cow position:
               
chr19:7978894-7978575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
59, 79
               

               
Conread position:
               
47-387
               

               
Cow position:
               
chr19:42726018-42726348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
163, 61
               

               
Conread position:
               
47-388
               

               
Cow position:
               
chr19:8212178-8211844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
27, 59
               

               
Conread position:
               
47-388
               

               
Cow position:
               
chr19:12697991-12698309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
199, 50
               

               
Conread position:
               
47-391
               

               
Cow position:
               
chr19:3496532-3496178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
51, 129
               

               
Conread position:
               
47-394
               

               
Cow position:
               
chr19:2138438-2138109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
234, 25
               

               
Conread position:
               
47-399
               

               
Cow position:
               
chr19:16566823-16567153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 76
               

               
Conread position:
               
47-400
               

               
Cow position:
               
chr19:24061961-24062278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
59, 79
               

               
Conread position:
               
47-401
               

               
Cow position:
               
chr19:8839262-8839609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
106, 48
               

               
Conread position:
               
47-401
               

               
Cow position:
               
chr19:11171554-11171214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
193, 59
               

               
Conread position:
               
47-401
               

               
Cow position:
               
chr19:33932479-33932146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
105, 60
               

               
Conread position:
               
47-401
               

               
Cow position:
               
chr19:36977251-36976909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
251, 26
               

               
Conread position:
               
47-402
               

               
Cow position:
               
chr19:2821243-2821588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
234, 59
               

               
Conread position:
               
47-402
               

               
Cow position:
               
chr19:5185589-5185245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 59
               

               
Conread position:
               
47-402
               

               
Cow position:
               
chr19:20661753-20661405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 79
               

               
Conread position:
               
47-407
               

               
Cow position:
               
chr19:42664157-42663813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
45, 83
               

               
Conread position:
               
47-409
               

               
Cow position:
               
chr19:8033403-8033758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 77
               

               
Conread position:
               
47-409
               

               
Cow position:
               
chr19:21198791-21199149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 78
               

               
Conread position:
               
47-409
               

               
Cow position:
               
chr19:22765282-22765633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 7
               

               
Conread position:
               
47-409
               

               
Cow position:
               
chr19:25727214-25726871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
101, 51
               

               
Conread position:
               
47-410
               

               
Cow position:
               
chr19:37647176-37646824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 15
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr19:268015-268366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
44, 79
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr19:730066-729730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
59, 77
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr19:1355277-1355615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
99, 59
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr19:1504810-1505141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
102, 53
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr19:2260467-2260117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
79, 49
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr19:2589178-2589521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
231, 55
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr19:5656446-5656112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
59, 80
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr19:13316742-13316406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
50, 60
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr19:14592718-14593068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 50
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr19:15863379-15863035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 61
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr19:23403986-23403632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
59, 79
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr19:24358559-24358229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
288, 58
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr19:25999299-25999633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 50
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr19:27612523-27612158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 128
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr19:28014145-28014491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 29
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr19:35018581-35018230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 58
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr19:38842881-38842547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
231, 21
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr19:47727904-47727561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
289, 59
               

               
Conread position:
               
47-419
               

               
Cow position:
               
chr19:3246370-3246029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
277, 59
               

               
Conread position:
               
47-420
               

               
Cow position:
               
chr19:14929008-14928636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
106, 59
               

               
Conread position:
               
47-421
               

               
Cow position:
               
chr19:11586205-11585846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 79
               

               
Conread position:
               
47-421
               

               
Cow position:
               
chr19:12712216-12711854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
59, 50
               

               
Conread position:
               
47-421
               

               
Cow position:
               
chr19:20671237-20670885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 55
               

               
Conread position:
               
47-421
               

               
Cow position:
               
chr19:23304841-23304469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 75
               

               
Conread position:
               
47-421
               

               
Cow position:
               
chr19:31825361-31824989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 58
               

               
Conread position:
               
47-421
               

               
Cow position:
               
chr19:34956033-34955677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 57
               

               
Conread position:
               
47-421
               

               
Cow position:
               
chr19:47109696-47110062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
69, 9
               

               
Conread position:
               
47-421
               

               
Cow position:
               
chr19:51401346-51400989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
217, 58
               

               
Conread position:
               
47-422
               

               
Cow position:
               
chr19:4448201-4448565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
192, 50
               

               
Conread position:
               
47-423
               

               
Cow position:
               
chr19:386813-387159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
239, 42
               

               
Conread position:
               
47-423
               

               
Cow position:
               
chr19:35539969-35540316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
59, 47
               

               
Conread position:
               
47-423
               

               
Cow position:
               
chr19:46454513-46454872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 38
               

               
Conread position:
               
47-425
               

               
Cow position:
               
chr19:6079716-6079333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
104, 59
               

               
Conread position:
               
47-425
               

               
Cow position:
               
chr19:34620367-34620003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 17
               

               
Conread position:
               
47-433
               

               
Cow position:
               
chr19:34425249-34425615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
102, 22
               

               
Conread position:
               
47-436
               

               
Cow position:
               
chr19:17795557-17795940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
107, 67
               

               
Conread position:
               
47-444
               

               
Cow position:
               
chr19:13267522-13267144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
112, 61
               

               
Conread position:
               
47-445
               

               
Cow position:
               
chr19:15068329-15067964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
106, 59
               

               
Conread position:
               
47-445
               

               
Cow position:
               
chr19:23785853-23786241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 29
               

               
Conread position:
               
47-445
               

               
Cow position:
               
chr19:43431654-43431284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 50
               

               
Conread position:
               
47-455
               

               
Cow position:
               
chr19:39056909-39057295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 59
               

               
Conread position:
               
47-514
               

               
Cow position:
               
chr19:35380881-35380437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
368, 30
               

               
Conread position:
               
47-520
               

               
Cow position:
               
chr19:6515925-6516364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
228, 59
               

               
Conread position:
               
48-333
               

               
Cow position:
               
chr19:30518718-30518992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
232, 58
               

               
Conread position:
               
48-401
               

               
Cow position:
               
chr19:1901336-1900998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
100, 58
               

               
Conread position:
               
48-423
               

               
Cow position:
               
chr19:39661877-39661520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
58, 22
               

               
Conread position:
               
48-455
               

               
Cow position:
               
chr19:12036838-12036455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
106, 20
               

               
Conread position:
               
49-325
               

               
Cow position:
               
chr19:39583790-39583533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
169, 48
               

               
Conread position:
               
49-327
               

               
Cow position:
               
chr19:19499886-19499625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
232, 54
               

               
Conread position:
               
49-333
               

               
Cow position:
               
chr19:23005699-23005426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
99, 57
               

               
Conread position:
               
49-333
               

               
Cow position:
               
chr19:35416300-35416030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 48
               

               
Conread position:
               
49-397
               

               
Cow position:
               
chr19:4340243-4339918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
22, 77
               

               
Conread position:
               
49-401
               

               
Cow position:
               
chr19:30746068-30746410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
151, 57
               

               
Conread position:
               
49-411
               

               
Cow position:
               
chr19:10947947-10947596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
223, 65
               

               
Conread position:
               
49-411
               

               
Cow position:
               
chr19:25086192-25086534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
93, 57
               

               
Conread position:
               
49-413
               

               
Cow position:
               
chr19:8496634-8496284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
223, 48
               

               
Conread position:
               
49-421
               

               
Cow position:
               
chr19:14253301-14253653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
107, 19
               

               
Conread position:
               
49-421
               

               
Cow position:
               
chr19:22746253-22746626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 120
               

               
Conread position:
               
49-421
               

               
Cow position:
               
chr19:46918507-46918871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 57
               

               
Conread position:
               
49-422
               

               
Cow position:
               
chr19:15437775-15438124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
57, 77
               

               
Conread position:
               
49-422
               

               
Cow position:
               
chr19:32457309-32457664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 28
               

               
Conread position:
               
49-425
               

               
Cow position:
               
chr19:27087472-27087831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
57, 13
               

               
Conread position:
               
49-519
               

               
Cow position:
               
chr19:36059577-36060033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 128
               

               
Conread position:
               
50-367
               

               
Cow position:
               
chr19:39245567-39245867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
98, 54
               

               
Conread position:
               
50-369
               

               
Cow position:
               
chr19:4460746-4460440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
222, 56
               

               
Conread position:
               
50-378
               

               
Cow position:
               
chr19:40848491-40848177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
222, 56
               

               
Conread position:
               
50-412
               

               
Cow position:
               
chr19:12233819-12234173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
202, 54
               

               
Conread position:
               
50-427
               

               
Cow position:
               
chr19:30237702-30238063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
222, 56
               

               
Conread position:
               
53-303
               

               
Cow position:
               
chr19:34654905-34654669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
195, 53
               

               
Conread position:
               
53-361
               

               
Cow position:
               
chr19:25696535-25696246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
53, 73
               

               
Conread position:
               
53-377
               

               
Cow position:
               
chr19:11395292-11394979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
219, 53
               

               
Conread position:
               
53-411
               

               
Cow position:
               
chr19:18786654-18786309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
53-411
               

               
Cow position:
               
chr19:30533612-30533942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
282, 52
               

               
Conread position:
               
53-411
               

               
Cow position:
               
chr19:36176410-36176761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 54
               

               
Conread position:
               
53-411
               

               
Cow position:
               
chr19:39576899-39576556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 52
               

               
Conread position:
               
53-419
               

               
Cow position:
               
chr19:42240619-42240270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 15
               

               
Conread position:
               
53-423
               

               
Cow position:
               
chr19:31594969-31595324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 53
               

               
Conread position:
               
53-424
               

               
Cow position:
               
chr19:31396220-31395873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
334, 54
               

               
Conread position:
               
54-389
               

               
Cow position:
               
chr19:31762669-31763017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
52, 307
               

               
Conread position:
               
54-410
               

               
Cow position:
               
chr19:14473107-14472771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
52, 72
               

               
Conread position:
               
55-276
               

               
Cow position:
               
chr19:10112479-10112699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
98, 51
               

               
Conread position:
               
55-377
               

               
Cow position:
               
chr19:55357729-55358033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
193, 53
               

               
Conread position:
               
55-386
               

               
Cow position:
               
chr19:4445948-4445634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 72
               

               
Conread position:
               
55-401
               

               
Cow position:
               
chr19:24669696-24669376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
51, 72
               

               
Conread position:
               
55-411
               

               
Cow position:
               
chr19:4588048-4587726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
56-424
               

               
Cow position:
               
chr19:43703029-43702684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
50, 70
               

               
Conread position:
               
56-435
               

               
Cow position:
               
chr19:43058203-43058570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
92, 41
               

               
Conread position:
               
58-413
               

               
Cow position:
               
chr19:38392472-38392819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 50
               

               
Conread position:
               
59-406
               

               
Cow position:
               
chr19:11003955-11003622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
198, 47
               

               
Conread position:
               
60-402
               

               
Cow position:
               
chr19:53657579-53657895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
275, 5
               

               
Conread position:
               
60-421
               

               
Cow position:
               
chr19:46822117-46822477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
93, 5
               

               
Conread position:
               
62-386
               

               
Cow position:
               
chr19:11066129-11065823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
92, 44
               

               
Conread position:
               
62-411
               

               
Cow position:
               
chr19:33912953-33912612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 17
               

               
Conread position:
               
72-386
               

               
Cow position:
               
chr19:419543-419878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
34, 107
               

               
Conread position:
               
76-371
               

               
Cow position:
               
chr19:26086888-26087171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
30, 51
               

               
Conread position:
               
79-411
               

               
Cow position:
               
chr19:24144703-24145030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 87
               

               
Conread position:
               
83-518
               

               
Cow position:
               
chr19:39360825-39361238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
21, 88
               

               
Conread position:
               
86-445
               

               
Cow position:
               
chr19:35622065-35622404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
249, 18
               

               
Conread position:
               
87-427
               

               
Cow position:
               
chr19:21335924-21335578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
10, 74
               

               
Conread position:
               
96-410
               

               
Cow position:
               
chr19:20935457-20935765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
36, 58
               

               
Conread position:
               
96-450
               

               
Cow position:
               
chr19:31846838-31846502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
57, 20
               

               
Conread position:
               
99-410
               

               
Cow position:
               
chr19:21065480-21065773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
17, 58
               

               
Conread position:
               
102-455
               

               
Cow position:
               
chr19:8793974-8793620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 58
               

               
Conread position:
               
105-387
               

               
Cow position:
               
chr19:19561217-19561504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
44, 62
               

               
Conread position:
               
106-365
               

               
Cow position:
               
chr19:52381245-52381493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
10, 18
               

               
Conread position:
               
106-409
               

               
Cow position:
               
chr19:8332007-8332310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 60
               

               
Conread position:
               
107-417
               

               
Cow position:
               
chr19:36379963-36380268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
229, 9
               

               
Conread position:
               
107-445
               

               
Cow position:
               
chr19:7473412-7473741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 21
               

               
Conread position:
               
108-411
               

               
Cow position:
               
chr19:1664480-1664178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
39, 33
               

               
Conread position:
               
108-445
               

               
Cow position:
               
chr19:2734164-2734493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 13
               

               
Conread position:
               
108-515
               

               
Cow position:
               
chr19:990695-990323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
112-411
               

               
Cow position:
               
chr19:41945906-41946195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
17, 53
               

               
Conread position:
               
113-411
               

               
Cow position:
               
chr19:15766934-15767215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
13, 44
               

               
Conread position:
               
114-343
               

               
Cow position:
               
chr19:39794677-39794909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 53
               

               
Conread position:
               
114-518
               

               
Cow position:
               
chr19:6417319-6417703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 53
               

               
Conread position:
               
115-411
               

               
Cow position:
               
chr19:17479238-17478947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
38, 6
               

               
Conread position:
               
116-411
               

               
Cow position:
               
chr19:38626590-38626292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
101, 46
               

               
Conread position:
               
116-421
               

               
Cow position:
               
chr19:33468747-33469042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
32, 17
               

               
Conread position:
               
117-362
               

               
Cow position:
               
chr19:25572170-25572411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
36, 7
               

               
Conread position:
               
120-259
               

               
Cow position:
               
chr19:2154349-2154211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
26, 47
               

               
Conread position:
               
120-311
               

               
Cow position:
               
chr19:33858480-33858664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
125, 46
               

               
Conread position:
               
120-328
               

               
Cow position:
               
chr19:54666931-54666722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
120-330
               

               
Cow position:
               
chr19:2208049-2207843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
162, 46
               

               
Conread position:
               
120-347
               

               
Cow position:
               
chr19:4537686-4537467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
153, 43
               

               
Conread position:
               
120-347
               

               
Cow position:
               
chr19:28451131-28451356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
120-349
               

               
Cow position:
               
chr19:25025763-25025543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
217, 19
               

               
Conread position:
               
120-364
               

               
Cow position:
               
chr19:21380199-21379962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
29, 49
               

               
Conread position:
               
120-377
               

               
Cow position:
               
chr19:21530769-21531025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
84, 41
               

               
Conread position:
               
120-385
               

               
Cow position:
               
chr19:33306823-33307087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
157, 46
               

               
Conread position:
               
120-386
               

               
Cow position:
               
chr19:32955610-32955874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
34, 47
               

               
Conread position:
               
120-401
               

               
Cow position:
               
chr19:9387360-9387638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
26, 43
               

               
Conread position:
               
120-406
               

               
Cow position:
               
chr19:38340248-38339973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
161, 33
               

               
Conread position:
               
120-408
               

               
Cow position:
               
chr19:6610275-6609988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
33, 47
               

               
Conread position:
               
120-409
               

               
Cow position:
               
chr19:15953023-15953306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
49, 33
               

               
Conread position:
               
120-409
               

               
Cow position:
               
chr19:35741883-35742172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 33
               

               
Conread position:
               
120-411
               

               
Cow position:
               
chr19:7668425-7668714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
45, 36
               

               
Conread position:
               
120-411
               

               
Cow position:
               
chr19:10964873-10964579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
31, 20
               

               
Conread position:
               
120-411
               

               
Cow position:
               
chr19:18750354-18750063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
120-411
               

               
Cow position:
               
chr19:47118772-47118484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 46
               

               
Conread position:
               
120-411
               

               
Cow position:
               
chr19:55952417-55952140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
216, 36
               

               
Conread position:
               
120-427
               

               
Cow position:
               
chr19:33306030-33306338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
32, 43
               

               
Conread position:
               
120-432
               

               
Cow position:
               
chr19:19661768-19662081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
178, 33
               

               
Conread position:
               
120-446
               

               
Cow position:
               
chr19:44397226-44397552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
158, 36
               

               
Conread position:
               
120-497
               

               
Cow position:
               
chr19:4252246-4251873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
120-497
               

               
Cow position:
               
chr19:27180533-27180176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
27, 47
               

               
Conread position:
               
120-520
               

               
Cow position:
               
chr19:39751207-39751572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
121-360
               

               
Cow position:
               
chr19:46181088-46180853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
45, 32
               

               
Conread position:
               
121-394
               

               
Cow position:
               
chr19:30232460-30232715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
240, 35
               

               
Conread position:
               
121-411
               

               
Cow position:
               
chr19:15887595-15887308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
32, 46
               

               
Conread position:
               
121-411
               

               
Cow position:
               
chr19:16096825-16096542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
25, 46
               

               
Conread position:
               
121-414
               

               
Cow position:
               
chr19:29368126-29368415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 46
               

               
Conread position:
               
121-414
               

               
Cow position:
               
chr19:29625632-29625920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 23
               

               
Conread position:
               
121-421
               

               
Cow position:
               
chr19:19919730-19919440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
215, 22
               

               
Conread position:
               
121-496
               

               
Cow position:
               
chr19:25053947-25053592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
32, 41
               

               
Conread position:
               
121-520
               

               
Cow position:
               
chr19:17664368-17664755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 40
               

               
Conread position:
               
122-307
               

               
Cow position:
               
chr19:12019185-12019360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 31
               

               
Conread position:
               
122-318
               

               
Cow position:
               
chr19:20433050-20432856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
31, 45
               

               
Conread position:
               
122-333
               

               
Cow position:
               
chr19:55238772-55238563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
122-400
               

               
Cow position:
               
chr19:44125377-44125648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 19
               

               
Conread position:
               
122-402
               

               
Cow position:
               
chr19:21363713-21363434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 22
               

               
Conread position:
               
122-411
               

               
Cow position:
               
chr19:10080797-10081087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
26, 45
               

               
Conread position:
               
124-407
               

               
Cow position:
               
chr19:53623293-53623571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
24, 41
               

               
Conread position:
               
124-415
               

               
Cow position:
               
chr19:2824810-2825105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
148, 45
               

               
Conread position:
               
124-421
               

               
Cow position:
               
chr19:10545978-10545683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
211, 37
               

               
Conread position:
               
124-422
               

               
Cow position:
               
chr19:56063699-56063407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
26, 47
               

               
Conread position:
               
125-315
               

               
Cow position:
               
chr19:2735247-2735049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 42
               

               
Conread position:
               
125-319
               

               
Cow position:
               
chr19:7492170-7492355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
9, 43
               

               
Conread position:
               
125-349
               

               
Cow position:
               
chr19:25637768-25637545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
212, 37
               

               
Conread position:
               
125-402
               

               
Cow position:
               
chr19:11163350-11163078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
136, 37
               

               
Conread position:
               
125-409
               

               
Cow position:
               
chr19:9542166-9541889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
26, 42
               

               
Conread position:
               
125-409
               

               
Cow position:
               
chr19:10213402-10213682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 42
               

               
Conread position:
               
125-409
               

               
Cow position:
               
chr19:41584705-41584979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 28
               

               
Conread position:
               
125-410
               

               
Cow position:
               
chr19:33033715-33033424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 42
               

               
Conread position:
               
125-411
               

               
Cow position:
               
chr19:3812284-3812003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
28, 42
               

               
Conread position:
               
125-411
               

               
Cow position:
               
chr19:33823048-33823331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 42
               

               
Conread position:
               
125-411
               

               
Cow position:
               
chr19:53791699-53791418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
139, 40
               

               
Conread position:
               
125-415
               

               
Cow position:
               
chr19:11376674-11376386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
23, 42
               

               
Conread position:
               
125-420
               

               
Cow position:
               
chr19:23222367-23222653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
205, 41
               

               
Conread position:
               
125-422
               

               
Cow position:
               
chr19:43440894-43441192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
28, 43
               

               
Conread position:
               
125-518
               

               
Cow position:
               
chr19:38638070-38637693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
28, 43
               

               
Conread position:
               
125-521
               

               
Cow position:
               
chr19:56382878-56383252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
27, 42
               

               
Conread position:
               
126-411
               

               
Cow position:
               
chr19:48722758-48723034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
23, 18
               

               
Conread position:
               
126-411
               

               
Cow position:
               
chr19:50646853-50646580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
27, 42
               

               
Conread position:
               
126-417
               

               
Cow position:
               
chr19:14347742-14348034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
40, 101
               

               
Conread position:
               
127-328
               

               
Cow position:
               
chr19:53588284-53588485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
145, 34
               

               
Conread position:
               
127-342
               

               
Cow position:
               
chr19:53037420-53037208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
141, 39
               

               
Conread position:
               
127-410
               

               
Cow position:
               
chr19:10186233-10186516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
26, 40
               

               
Conread position:
               
127-411
               

               
Cow position:
               
chr19:1968571-1968293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 40
               

               
Conread position:
               
127-411
               

               
Cow position:
               
chr19:21378733-21378457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
28, 35
               

               
Conread position:
               
127-520
               

               
Cow position:
               
chr19:16694314-16693935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 40
               

               
Conread position:
               
128-328
               

               
Cow position:
               
chr19:48474877-48475073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
39, 25
               

               
Conread position:
               
128-408
               

               
Cow position:
               
chr19:7637503-7637226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
22, 40
               

               
Conread position:
               
129-411
               

               
Cow position:
               
chr19:47671487-47671756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
206, 37
               

               
Conread position:
               
131-353
               

               
Cow position:
               
chr19:43516973-43517188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 33
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr19:1152961-1153226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
204, 13
               

               
Conread position:
               
131-411
               

               
Cow position:
               
chr19:25653025-25652744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
9, 36
               

               
Conread position:
               
131-419
               

               
Cow position:
               
chr19:30886131-30886417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
140, 35
               

               
Conread position:
               
131-443
               

               
Cow position:
               
chr19:43418158-43418449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
147, 22
               

               
Conread position:
               
132-420
               

               
Cow position:
               
chr19:56150329-56150043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
150, 38
               

               
Conread position:
               
132-445
               

               
Cow position:
               
chr19:12154587-12154900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
148, 29
               

               
Conread position:
               
133-346
               

               
Cow position:
               
chr19:30925578-30925373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
140, 33
               

               
Conread position:
               
133-517
               

               
Cow position:
               
chr19:39777431-39777060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 35
               

               
Conread position:
               
136-331
               

               
Cow position:
               
chr19:56001119-56000924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
82, 31
               

               
Conread position:
               
136-392
               

               
Cow position:
               
chr19:46159799-46160049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
17, 32
               

               
Conread position:
               
136-402
               

               
Cow position:
               
chr19:5116125-5115876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
14, 31
               

               
Conread position:
               
136-411
               

               
Cow position:
               
chr19:51185168-51185436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 32
               

               
Conread position:
               
137-370
               

               
Cow position:
               
chr19:53776835-53776601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
137-401
               

               
Cow position:
               
chr19:53645671-53645423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
138-409
               

               
Cow position:
               
chr19:3621172-3621440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 14
               

               
Conread position:
               
138-409
               

               
Cow position:
               
chr19:20310886-20310623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
138-426
               

               
Cow position:
               
chr19:32450822-32451111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 29
               

               
Conread position:
               
141-401
               

               
Cow position:
               
chr19:38907608-38907353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
157, 20
               

               
Conread position:
               
141-452
               

               
Cow position:
               
chr19:32754262-32754577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 24
               

               
Conread position:
               
143-347
               

               
Cow position:
               
chr19:10706031-10706236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
10, 24
               

               
Conread position:
               
147-333
               

               
Cow position:
               
chr19:51334422-51334610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
126, 19
               

               
Conread position:
               
147-409
               

               
Cow position:
               
chr19:34000961-34001217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
20, 42
               

               
Conread position:
               
147-411
               

               
Cow position:
               
chr19:11191869-11191604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
131, 17
               

               
Conread position:
               
147-419
               

               
Cow position:
               
chr19:47187298-47187034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
131, 19
               

               
Conread position:
               
147-516
               

               
Cow position:
               
chr19:55930421-55930082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
219, 19
               

               
Conread position:
               
148-419
               

               
Cow position:
               
chr19:30471582-30471333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
197, 15
               

               
Conread position:
               
148-435
               

               
Cow position:
               
chr19:34911640-34911924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
149-401
               

               
Cow position:
               
chr19:433371-433127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 17
               

               
Conread position:
               
149-410
               

               
Cow position:
               
chr19:13129638-13129887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
186, 17
               

               
Conread position:
               
149-421
               

               
Cow position:
               
chr19:6531644-6531908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
19, 78
               

               
Conread position:
               
149-421
               

               
Cow position:
               
chr19:22799327-22799056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
132, 18
               

               
Conread position:
               
150-387
               

               
Cow position:
               
chr19:5913196-5912968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 83
               

               
Conread position:
               
153-398
               

               
Cow position:
               
chr19:56094297-56094539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
12, 52
               

               
Conread position:
               
154-325
               

               
Cow position:
               
chr19:24956683-24956518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
157-411
               

               
Cow position:
               
chr19:35762495-35762239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 196
               

               
Conread position:
               
157-421
               

               
Cow position:
               
chr19:8864511-8864770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 10
               

               
Conread position:
               
158-401
               

               
Cow position:
               
chr19:55688941-55688693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
17, 26
               

               
Conread position:
               
163-411
               

               
Cow position:
               
chr19:36245718-36245481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
108, 92
               

               
Conread position:
               
164-411
               

               
Cow position:
               
chr19:36722093-36722324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
164-421
               

               
Cow position:
               
chr19:25382936-25382666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
108, 203
               

               
Conread position:
               
166-518
               

               
Cow position:
               
chr19:51621411-51621086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
115, 12
               

               
Conread position:
               
167-347
               

               
Cow position:
               
chr19:8209617-8209439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
111, 66
               

               
Conread position:
               
168-518
               

               
Cow position:
               
chr19:25835583-25835236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
156, 58
               

               
Conread position:
               
169-353
               

               
Cow position:
               
chr19:23244746-23244565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
165, 63
               

               
Conread position:
               
169-520
               

               
Cow position:
               
chr19:11565377-11565058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
91, 96
               

               
Conread position:
               
172-401
               

               
Cow position:
               
chr19:16621578-16621349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
89, 22
               

               
Conread position:
               
177-385
               

               
Cow position:
               
chr19:55324655-55324858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
94, 141
               

               
Conread position:
               
177-386
               

               
Cow position:
               
chr19:7158951-7158733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
177-401
               

               
Cow position:
               
chr19:51231038-51230822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
158, 32
               

               
Conread position:
               
177-411
               

               
Cow position:
               
chr19:35846677-35846911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
158, 100
               

               
Conread position:
               
178-401
               

               
Cow position:
               
chr19:33903639-33903421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
157, 34
               

               
Conread position:
               
179-410
               

               
Cow position:
               
chr19:53840301-53840531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
92, 7
               

               
Conread position:
               
180-422
               

               
Cow position:
               
chr19:33290267-33290506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
98, 136
               

               
Conread position:
               
184-368
               

               
Cow position:
               
chr19:8270818-8270629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
87, 172
               

               
Conread position:
               
184-409
               

               
Cow position:
               
chr19:48960179-48960408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
64, 171
               

               
Conread position:
               
184-411
               

               
Cow position:
               
chr19:38724061-38723833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
34, 44
               

               
Conread position:
               
184-425
               

               
Cow position:
               
chr19:24137047-24137288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
151, 162
               

               
Conread position:
               
184-445
               

               
Cow position:
               
chr19:43291837-43292097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
94, 37
               

               
Conread position:
               
185-420
               

               
Cow position:
               
chr19:36097011-36097241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
87, 49
               

               
Conread position:
               
185-421
               

               
Cow position:
               
chr19:25673729-25673501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
93, 49
               

               
Conread position:
               
187-402
               

               
Cow position:
               
chr19:22134353-22134146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
91, 48
               

               
Conread position:
               
188-400
               

               
Cow position:
               
chr19:25769454-25769674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
188-409
               

               
Cow position:
               
chr19:20984977-20984763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
147, 19
               

               
Conread position:
               
188-411
               

               
Cow position:
               
chr19:42563925-42564157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
83, 133
               

               
Conread position:
               
189-397
               

               
Cow position:
               
chr19:6092559-6092765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
76, 158
               

               
Conread position:
               
191-310
               

               
Cow position:
               
chr19:48744744-48744629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
113, 64
               

               
Conread position:
               
191-333
               

               
Cow position:
               
chr19:52136900-52136758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
192-393
               

               
Cow position:
               
chr19:52456964-52456764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
134, 123
               

               
Conread position:
               
192-409
               

               
Cow position:
               
chr19:25655441-25655217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
192-410
               

               
Cow position:
               
chr19:4329250-4329038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
143, 82
               

               
Conread position:
               
205-421
               

               
Cow position:
               
chr19:10242394-10242604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
206-361
               

               
Cow position:
               
chr19:20331995-20331845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
131, 27
               

               
Conread position:
               
206-420
               

               
Cow position:
               
chr19:52675297-52675083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
70, 141
               

               
Conread position:
               
207-421
               

               
Cow position:
               
chr19:40051583-40051372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
17, 121
               

               
Conread position:
               
209-409
               

               
Cow position:
               
chr19:24760071-24759872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
127, 24
               

               
Conread position:
               
211-411
               

               
Cow position:
               
chr19:22043537-22043340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
13, 35
               

               
Conread position:
               
213-411
               

               
Cow position:
               
chr19:25628319-25628124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
5, 28
               

               
Conread position:
               
214-402
               

               
Cow position:
               
chr19:55967876-55967699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
215-416
               

               
Cow position:
               
chr19:30267746-30267538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 119
               

               
Conread position:
               
217-402
               

               
Cow position:
               
chr19:6049848-6049670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
217-411
               

               
Cow position:
               
chr19:15442584-15442773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
109, 46
               

               
Conread position:
               
217-479
               

               
Cow position:
               
chr19:41518093-41517833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
59, 146
               

               
Conread position:
               
218-411
               

               
Cow position:
               
chr19:47859492-47859303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
60, 17
               

               
Conread position:
               
222-408
               

               
Cow position:
               
chr19:10698052-10698237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
115, 52
               

               
Conread position:
               
222-415
               

               
Cow position:
               
chr19:13730012-13729824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
107, 7
               

               
Conread position:
               
226-405
               

               
Cow position:
               
chr19:56140825-56141002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
109, 130
               

               
Conread position:
               
226-411
               

               
Cow position:
               
chr19:47453262-47453444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
19, 74
               

               
Conread position:
               
226-422
               

               
Cow position:
               
chr19:11442808-11443011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
51, 195
               

               
Conread position:
               
226-507
               

               
Cow position:
               
chr19:4722208-4721918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
26, 19
               

               
Conread position:
               
228-411
               

               
Cow position:
               
chr19:38499997-38500179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
109, 59
               

               
Conread position:
               
228-421
               

               
Cow position:
               
chr19:34287854-34288043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
107, 46
               

               
Conread position:
               
229-399
               

               
Cow position:
               
chr19:15719787-15719618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
140, 23
               

               
Conread position:
               
231-421
               

               
Cow position:
               
chr19:31535961-31536148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
105, 14
               

               
Conread position:
               
231-518
               

               
Cow position:
               
chr19:39622972-39622696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
18, 14
               

               
Conread position:
               
234-421
               

               
Cow position:
               
chr19:18153007-18153186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
111, 11
               

               
Conread position:
               
235-411
               

               
Cow position:
               
chr19:21816798-21816979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
236-411
               

               
Cow position:
               
chr19:25807465-25807288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
245-446
               

               
Cow position:
               
chr19:7404534-7404332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 172
               

               
Conread position:
               
248-518
               

               
Cow position:
               
chr19:50849671-50849934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
30, 46
               

               
Conread position:
               
249-409
               

               
Cow position:
               
chr19:42903858-42904021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
250-389
               

               
Cow position:
               
chr19:30927671-30927810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
84, 65
               

               
Conread position:
               
250-411
               

               
Cow position:
               
chr19:4092361-4092526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
86, 27
               

               
Conread position:
               
250-445
               

               
Cow position:
               
chr19:52158386-52158585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
256-445
               

               
Cow position:
               
chr19:39485176-39485363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
81, 94
               

               
Conread position:
               
261-411
               

               
Cow position:
               
chr19:25035348-25035491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
268-411
               

               
Cow position:
               
chr19:42517388-42517243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
281-455
               

               
Cow position:
               
chr19:13757131-13757303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
57, 135
               

               
Conread position:
               
289-411
               

               
Cow position:
               
chr19:19549658-19549533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
300-423
               

               
Cow position:
               
chr19:16105181-16105055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
300-455
               

               
Cow position:
               
chr19:25954837-25954687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 57
               

               
Conread position:
               
305-520
               

               
Cow position:
               
chr19:5754899-5754690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
14, 56
               

               
Conread position:
               
334-518
               

               
Cow position:
               
chr19:6928309-6928118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
440-520
               

               
Cow position:
               
chr19:26269218-26269138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
81
               

               
Alignm identity:
               
72
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.