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Cow genome map

           
Conread name:
           
rthg20_o8.y1
        

               
Conread position:
               
32-455
               

               
Cow position:
               
chr21:14464287-14464709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
7, 64
               

               
Conread position:
               
40-270
               

               
Cow position:
               
chr21:34011371-34011150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
66, 77
               

               
Conread position:
               
44-311
               

               
Cow position:
               
chr21:21223020-21223280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
44-387
               

               
Cow position:
               
chr21:40244170-40244508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
62, 82
               

               
Conread position:
               
44-411
               

               
Cow position:
               
chr21:38120839-38121188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 62
               

               
Conread position:
               
44-421
               

               
Cow position:
               
chr21:30231964-30231598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
62, 53
               

               
Conread position:
               
46-421
               

               
Cow position:
               
chr21:25536733-25537094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
226, 51
               

               
Conread position:
               
47-232
               

               
Cow position:
               
chr21:44074184-44074378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
59, 124
               

               
Conread position:
               
47-278
               

               
Cow position:
               
chr21:20549179-20548957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
69, 57
               

               
Conread position:
               
47-284
               

               
Cow position:
               
chr21:17282442-17282665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
59, 77
               

               
Conread position:
               
47-302
               

               
Cow position:
               
chr21:28029136-28029379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
101, 60
               

               
Conread position:
               
47-311
               

               
Cow position:
               
chr21:31158994-31159250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
101, 18
               

               
Conread position:
               
47-319
               

               
Cow position:
               
chr21:5566730-5566995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
107, 57
               

               
Conread position:
               
47-319
               

               
Cow position:
               
chr21:44252089-44251840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
97, 59
               

               
Conread position:
               
47-326
               

               
Cow position:
               
chr21:7717049-7716782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
103, 51
               

               
Conread position:
               
47-328
               

               
Cow position:
               
chr21:5344400-5344662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
231, 59
               

               
Conread position:
               
47-328
               

               
Cow position:
               
chr21:11707011-11706741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
59, 47
               

               
Conread position:
               
47-333
               

               
Cow position:
               
chr21:36819484-36819203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
101, 59
               

               
Conread position:
               
47-340
               

               
Cow position:
               
chr21:24864894-24865174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 80
               

               
Conread position:
               
47-341
               

               
Cow position:
               
chr21:4080093-4080377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
59, 80
               

               
Conread position:
               
47-345
               

               
Cow position:
               
chr21:48484701-48484425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
231, 57
               

               
Conread position:
               
47-364
               

               
Cow position:
               
chr21:81809-82121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
101, 61
               

               
Conread position:
               
47-364
               

               
Cow position:
               
chr21:33209938-33210242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 48
               

               
Conread position:
               
47-365
               

               
Cow position:
               
chr21:30849205-30848904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
106, 50
               

               
Conread position:
               
47-366
               

               
Cow position:
               
chr21:13035310-13035001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
119, 59
               

               
Conread position:
               
47-370
               

               
Cow position:
               
chr21:2927495-2927157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
18, 213
               

               
Conread position:
               
47-370
               

               
Cow position:
               
chr21:42464102-42463786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
106, 50
               

               
Conread position:
               
47-371
               

               
Cow position:
               
chr21:23821907-23822215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
59, 78
               

               
Conread position:
               
47-371
               

               
Cow position:
               
chr21:41957435-41957128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
106, 61
               

               
Conread position:
               
47-385
               

               
Cow position:
               
chr21:45866675-45866995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
59, 80
               

               
Conread position:
               
47-386
               

               
Cow position:
               
chr21:36163224-36162897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
59, 79
               

               
Conread position:
               
47-391
               

               
Cow position:
               
chr21:22855958-22856288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
224, 59
               

               
Conread position:
               
47-391
               

               
Cow position:
               
chr21:42914007-42913676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 59
               

               
Conread position:
               
47-394
               

               
Cow position:
               
chr21:21480440-21480114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
47-394
               

               
Cow position:
               
chr21:39401339-39401665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
59, 77
               

               
Conread position:
               
47-397
               

               
Cow position:
               
chr21:4189571-4189914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 82
               

               
Conread position:
               
47-397
               

               
Cow position:
               
chr21:32297763-32297446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
47-400
               

               
Cow position:
               
chr21:28734173-28733836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 59
               

               
Conread position:
               
47-401
               

               
Cow position:
               
chr21:2786053-2785699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
50, 92
               

               
Conread position:
               
47-401
               

               
Cow position:
               
chr21:4905228-4904890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
59, 77
               

               
Conread position:
               
47-401
               

               
Cow position:
               
chr21:5137768-5137410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
48, 170
               

               
Conread position:
               
47-401
               

               
Cow position:
               
chr21:6764963-6764623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
224, 59
               

               
Conread position:
               
47-402
               

               
Cow position:
               
chr21:36642646-36642982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
102, 58
               

               
Conread position:
               
47-402
               

               
Cow position:
               
chr21:44671492-44671823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
106, 60
               

               
Conread position:
               
47-407
               

               
Cow position:
               
chr21:40786410-40786761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
101, 15
               

               
Conread position:
               
47-407
               

               
Cow position:
               
chr21:42414360-42414015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
204, 57
               

               
Conread position:
               
47-407
               

               
Cow position:
               
chr21:47802523-47802176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
106, 60
               

               
Conread position:
               
47-409
               

               
Cow position:
               
chr21:2904723-2904393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
59, 78
               

               
Conread position:
               
47-409
               

               
Cow position:
               
chr21:4794960-4795311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 58
               

               
Conread position:
               
47-409
               

               
Cow position:
               
chr21:31691220-31691570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 57
               

               
Conread position:
               
47-409
               

               
Cow position:
               
chr21:33983071-33982722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 80
               

               
Conread position:
               
47-409
               

               
Cow position:
               
chr21:36297218-36297578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 57
               

               
Conread position:
               
47-409
               

               
Cow position:
               
chr21:43357522-43357169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
227, 57
               

               
Conread position:
               
47-409
               

               
Cow position:
               
chr21:46263916-46264255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
106, 43
               

               
Conread position:
               
47-410
               

               
Cow position:
               
chr21:34391227-34390889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
288, 17
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr21:641323-641674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 76
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr21:643076-643411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 79
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr21:725151-724797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 59
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr21:9415982-9416337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 9
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr21:13048457-13048106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
59, 71
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr21:16612368-16612712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 80
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr21:23192779-23192425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 59
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr21:24607124-24607473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
59, 80
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr21:24858050-24858402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 53
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr21:27230053-27229704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 57
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr21:27863780-27863426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 59
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr21:28210924-28211282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 91
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr21:28442473-28442819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
39, 62
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr21:29214416-29214073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
59, 48
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr21:33350484-33350828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
106, 50
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr21:33562753-33563095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
232, 54
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr21:44515004-44515351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
74, 57
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr21:47760516-47760855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
59, 79
               

               
Conread position:
               
47-413
               

               
Cow position:
               
chr21:30250466-30250112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
59, 14
               

               
Conread position:
               
47-415
               

               
Cow position:
               
chr21:395617-395959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 59
               

               
Conread position:
               
47-417
               

               
Cow position:
               
chr21:5649645-5649999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
59, 80
               

               
Conread position:
               
47-419
               

               
Cow position:
               
chr21:5898656-5898306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
101, 39
               

               
Conread position:
               
47-419
               

               
Cow position:
               
chr21:36795339-36795699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
118, 59
               

               
Conread position:
               
47-421
               

               
Cow position:
               
chr21:426531-426903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
224, 59
               

               
Conread position:
               
47-421
               

               
Cow position:
               
chr21:5392799-5392439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 50
               

               
Conread position:
               
47-421
               

               
Cow position:
               
chr21:10727020-10727373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
288, 58
               

               
Conread position:
               
47-421
               

               
Cow position:
               
chr21:33997486-33997131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
27, 17
               

               
Conread position:
               
47-421
               

               
Cow position:
               
chr21:42384247-42384604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
106, 50
               

               
Conread position:
               
47-423
               

               
Cow position:
               
chr21:7582166-7581807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
294, 58
               

               
Conread position:
               
47-424
               

               
Cow position:
               
chr21:3585617-3585269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
312, 59
               

               
Conread position:
               
47-424
               

               
Cow position:
               
chr21:7132723-7132378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
47-425
               

               
Cow position:
               
chr21:18850487-18850125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 56
               

               
Conread position:
               
47-425
               

               
Cow position:
               
chr21:42540481-42540122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 61
               

               
Conread position:
               
47-429
               

               
Cow position:
               
chr21:29069589-29069223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 79
               

               
Conread position:
               
47-432
               

               
Cow position:
               
chr21:28998168-28997790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
235, 59
               

               
Conread position:
               
47-439
               

               
Cow position:
               
chr21:30990529-30990165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
47-443
               

               
Cow position:
               
chr21:33263590-33263960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 57
               

               
Conread position:
               
47-444
               

               
Cow position:
               
chr21:24765006-24765403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
36, 122
               

               
Conread position:
               
47-445
               

               
Cow position:
               
chr21:11645246-11644848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 125
               

               
Conread position:
               
47-445
               

               
Cow position:
               
chr21:12153872-12154251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
105, 60
               

               
Conread position:
               
47-445
               

               
Cow position:
               
chr21:37299204-37299580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 59
               

               
Conread position:
               
47-446
               

               
Cow position:
               
chr21:44755038-44754659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
290, 54
               

               
Conread position:
               
47-448
               

               
Cow position:
               
chr21:12961174-12960775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 109
               

               
Conread position:
               
47-453
               

               
Cow position:
               
chr21:9710976-9710574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
18, 61
               

               
Conread position:
               
47-479
               

               
Cow position:
               
chr21:20925766-20925350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 15
               

               
Conread position:
               
47-518
               

               
Cow position:
               
chr21:25382737-25383195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
108, 121
               

               
Conread position:
               
47-518
               

               
Cow position:
               
chr21:39889005-39888569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 59
               

               
Conread position:
               
47-519
               

               
Cow position:
               
chr21:12616881-12617332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 50
               

               
Conread position:
               
47-520
               

               
Cow position:
               
chr21:38691931-38692367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
259, 32
               

               
Conread position:
               
48-333
               

               
Cow position:
               
chr21:23683290-23683557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
58, 77
               

               
Conread position:
               
48-333
               

               
Cow position:
               
chr21:45151891-45151610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
100, 57
               

               
Conread position:
               
48-411
               

               
Cow position:
               
chr21:6051223-6051590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
50, 135
               

               
Conread position:
               
48-411
               

               
Cow position:
               
chr21:16188055-16187720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
287, 25
               

               
Conread position:
               
48-432
               

               
Cow position:
               
chr21:28993886-28993509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
105, 58
               

               
Conread position:
               
48-449
               

               
Cow position:
               
chr21:11740392-11739996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
58, 76
               

               
Conread position:
               
49-240
               

               
Cow position:
               
chr21:19702265-19702444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
49-253
               

               
Cow position:
               
chr21:684220-684413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
49-333
               

               
Cow position:
               
chr21:13954252-13954527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
223, 57
               

               
Conread position:
               
49-366
               

               
Cow position:
               
chr21:393762-394062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
102, 57
               

               
Conread position:
               
49-374
               

               
Cow position:
               
chr21:7452384-7452075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
202, 55
               

               
Conread position:
               
49-377
               

               
Cow position:
               
chr21:28259738-28260052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
223, 57
               

               
Conread position:
               
49-385
               

               
Cow position:
               
chr21:1463974-1464291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
57, 70
               

               
Conread position:
               
49-385
               

               
Cow position:
               
chr21:42170372-42170695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
183, 7
               

               
Conread position:
               
49-386
               

               
Cow position:
               
chr21:33729174-33729492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
116, 57
               

               
Conread position:
               
49-401
               

               
Cow position:
               
chr21:16909796-16910138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
229, 56
               

               
Conread position:
               
49-401
               

               
Cow position:
               
chr21:18783942-18783611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
282, 38
               

               
Conread position:
               
49-401
               

               
Cow position:
               
chr21:36793623-36793972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
57, 78
               

               
Conread position:
               
49-409
               

               
Cow position:
               
chr21:5455245-5454906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
229, 57
               

               
Conread position:
               
49-411
               

               
Cow position:
               
chr21:5153358-5153708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
57, 78
               

               
Conread position:
               
49-411
               

               
Cow position:
               
chr21:19766595-19766941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
57, 77
               

               
Conread position:
               
49-411
               

               
Cow position:
               
chr21:20160425-20160763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
282, 57
               

               
Conread position:
               
49-411
               

               
Cow position:
               
chr21:41974638-41974287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
57, 69
               

               
Conread position:
               
49-411
               

               
Cow position:
               
chr21:44565964-44565630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
116, 48
               

               
Conread position:
               
49-417
               

               
Cow position:
               
chr21:43240600-43240959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
57, 28
               

               
Conread position:
               
49-419
               

               
Cow position:
               
chr21:7564581-7564220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
57, 77
               

               
Conread position:
               
49-419
               

               
Cow position:
               
chr21:19196427-19196068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 57
               

               
Conread position:
               
49-421
               

               
Cow position:
               
chr21:32191912-32192270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
57, 15
               

               
Conread position:
               
49-424
               

               
Cow position:
               
chr21:22719039-22718682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
57, 50
               

               
Conread position:
               
49-455
               

               
Cow position:
               
chr21:28477366-28477755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
223, 57
               

               
Conread position:
               
49-518
               

               
Cow position:
               
chr21:28881890-28882350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
286, 53
               

               
Conread position:
               
50-333
               

               
Cow position:
               
chr21:18718411-18718682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
104, 44
               

               
Conread position:
               
50-333
               

               
Cow position:
               
chr21:23900065-23899793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
222, 56
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr21:11759722-11759415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
168, 48
               

               
Conread position:
               
50-401
               

               
Cow position:
               
chr21:27743483-27743826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
103, 47
               

               
Conread position:
               
50-402
               

               
Cow position:
               
chr21:10854328-10854674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
230, 56
               

               
Conread position:
               
50-421
               

               
Cow position:
               
chr21:23586605-23586978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 9
               

               
Conread position:
               
50-421
               

               
Cow position:
               
chr21:24222799-24222441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
103, 45
               

               
Conread position:
               
50-427
               

               
Cow position:
               
chr21:5021210-5021572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
222, 56
               

               
Conread position:
               
50-427
               

               
Cow position:
               
chr21:17144890-17145248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
222, 56
               

               
Conread position:
               
50-427
               

               
Cow position:
               
chr21:24136660-24137017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
222, 56
               

               
Conread position:
               
51-521
               

               
Cow position:
               
chr21:37479702-37480137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 46
               

               
Conread position:
               
52-427
               

               
Cow position:
               
chr21:27607619-27607263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
226, 54
               

               
Conread position:
               
53-289
               

               
Cow position:
               
chr21:20162280-20162503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
95, 53
               

               
Conread position:
               
53-411
               

               
Cow position:
               
chr21:25764380-25764723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 53
               

               
Conread position:
               
53-415
               

               
Cow position:
               
chr21:3236277-3236617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
282, 53
               

               
Conread position:
               
53-421
               

               
Cow position:
               
chr21:11639765-11640118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
281, 53
               

               
Conread position:
               
53-421
               

               
Cow position:
               
chr21:30607358-30606991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
53, 118
               

               
Conread position:
               
53-422
               

               
Cow position:
               
chr21:49700292-49699943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
7, 54
               

               
Conread position:
               
53-436
               

               
Cow position:
               
chr21:42500776-42501154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 53
               

               
Conread position:
               
53-447
               

               
Cow position:
               
chr21:10882171-10882567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
116, 53
               

               
Conread position:
               
54-311
               

               
Cow position:
               
chr21:4279378-4279620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
52, 72
               

               
Conread position:
               
54-394
               

               
Cow position:
               
chr21:912218-911896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
281, 35
               

               
Conread position:
               
54-397
               

               
Cow position:
               
chr21:23672491-23672822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
6, 54
               

               
Conread position:
               
54-409
               

               
Cow position:
               
chr21:2367086-2367417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
94, 44
               

               
Conread position:
               
54-411
               

               
Cow position:
               
chr21:23150273-23149934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 52
               

               
Conread position:
               
54-411
               

               
Cow position:
               
chr21:37706672-37706328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
52, 43
               

               
Conread position:
               
55-343
               

               
Cow position:
               
chr21:34658781-34659054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
51, 71
               

               
Conread position:
               
55-378
               

               
Cow position:
               
chr21:40058553-40058861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
280, 52
               

               
Conread position:
               
55-411
               

               
Cow position:
               
chr21:23500074-23499737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
280, 51
               

               
Conread position:
               
55-411
               

               
Cow position:
               
chr21:41155609-41155952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 63
               

               
Conread position:
               
55-411
               

               
Cow position:
               
chr21:44826128-44825802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
307, 26
               

               
Conread position:
               
55-420
               

               
Cow position:
               
chr21:6833799-6834144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
51, 71
               

               
Conread position:
               
55-421
               

               
Cow position:
               
chr21:18289410-18289759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
279, 47
               

               
Conread position:
               
55-521
               

               
Cow position:
               
chr21:39403791-39403353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
222, 51
               

               
Conread position:
               
56-263
               

               
Cow position:
               
chr21:35899555-35899749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
92, 48
               

               
Conread position:
               
56-411
               

               
Cow position:
               
chr21:32535726-32536064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
92, 26
               

               
Conread position:
               
57-402
               

               
Cow position:
               
chr21:13128345-13128018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
278, 47
               

               
Conread position:
               
58-367
               

               
Cow position:
               
chr21:6192422-6192722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
58, 39
               

               
Conread position:
               
58-414
               

               
Cow position:
               
chr21:38900523-38900864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 68
               

               
Conread position:
               
59-328
               

               
Cow position:
               
chr21:19070838-19070578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
47, 66
               

               
Conread position:
               
59-333
               

               
Cow position:
               
chr21:4267599-4267336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
213, 47
               

               
Conread position:
               
59-401
               

               
Cow position:
               
chr21:10151546-10151882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
205, 47
               

               
Conread position:
               
63-445
               

               
Cow position:
               
chr21:19614928-19615294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
215, 43
               

               
Conread position:
               
64-360
               

               
Cow position:
               
chr21:5636965-5636682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
89, 42
               

               
Conread position:
               
64-386
               

               
Cow position:
               
chr21:13410067-13409767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
42, 61
               

               
Conread position:
               
64-410
               

               
Cow position:
               
chr21:24130837-24131155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
42, 61
               

               
Conread position:
               
64-420
               

               
Cow position:
               
chr21:23322325-23321983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
206, 42
               

               
Conread position:
               
66-312
               

               
Cow position:
               
chr21:28599525-28599764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
87, 39
               

               
Conread position:
               
69-411
               

               
Cow position:
               
chr21:27569403-27569082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
289, 37
               

               
Conread position:
               
71-288
               

               
Cow position:
               
chr21:28907889-28907683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
77, 35
               

               
Conread position:
               
71-410
               

               
Cow position:
               
chr21:4098635-4098959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 36
               

               
Conread position:
               
71-431
               

               
Cow position:
               
chr21:11114468-11114818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
35, 23
               

               
Conread position:
               
72-386
               

               
Cow position:
               
chr21:40899100-40899401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
76, 34
               

               
Conread position:
               
79-333
               

               
Cow position:
               
chr21:42348907-42348665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
27, 48
               

               
Conread position:
               
79-341
               

               
Cow position:
               
chr21:27124357-27124108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
27, 47
               

               
Conread position:
               
79-367
               

               
Cow position:
               
chr21:9278139-9278423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
69, 26
               

               
Conread position:
               
83-330
               

               
Cow position:
               
chr21:24887778-24888015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
85-346
               

               
Cow position:
               
chr21:8618041-8618300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
63, 12
               

               
Conread position:
               
85-408
               

               
Cow position:
               
chr21:29484749-29485066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 82
               

               
Conread position:
               
85-423
               

               
Cow position:
               
chr21:37361701-37361379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
81, 13
               

               
Conread position:
               
89-347
               

               
Cow position:
               
chr21:24094977-24094724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
8, 81
               

               
Conread position:
               
89-400
               

               
Cow position:
               
chr21:46242468-46242161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
192, 23
               

               
Conread position:
               
89-421
               

               
Cow position:
               
chr21:10601596-10601279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
246, 17
               

               
Conread position:
               
90-517
               

               
Cow position:
               
chr21:19083822-19083421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
122, 16
               

               
Conread position:
               
104-401
               

               
Cow position:
               
chr21:9028407-9028693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 38
               

               
Conread position:
               
105-411
               

               
Cow position:
               
chr21:24598445-24598744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
60, 131
               

               
Conread position:
               
107-379
               

               
Cow position:
               
chr21:27521537-27521277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 9
               

               
Conread position:
               
110-375
               

               
Cow position:
               
chr21:22353437-22353182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
38, 6
               

               
Conread position:
               
110-411
               

               
Cow position:
               
chr21:13738362-13738647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
111-455
               

               
Cow position:
               
chr21:33727667-33727333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 15
               

               
Conread position:
               
114-327
               

               
Cow position:
               
chr21:13163688-13163894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
164, 39
               

               
Conread position:
               
116-387
               

               
Cow position:
               
chr21:31676295-31676562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
32, 51
               

               
Conread position:
               
116-411
               

               
Cow position:
               
chr21:18842441-18842150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
37, 51
               

               
Conread position:
               
116-411
               

               
Cow position:
               
chr21:42841793-42841510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
163, 9
               

               
Conread position:
               
119-345
               

               
Cow position:
               
chr21:33791568-33791344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
29, 49
               

               
Conread position:
               
120-329
               

               
Cow position:
               
chr21:13303620-13303824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
30, 47
               

               
Conread position:
               
120-330
               

               
Cow position:
               
chr21:13395357-13395558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
158, 46
               

               
Conread position:
               
120-330
               

               
Cow position:
               
chr21:28512333-28512535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
31, 47
               

               
Conread position:
               
120-346
               

               
Cow position:
               
chr21:32237098-32237318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
158, 41
               

               
Conread position:
               
120-366
               

               
Cow position:
               
chr21:17434520-17434276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
35, 46
               

               
Conread position:
               
120-366
               

               
Cow position:
               
chr21:34010589-34010352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
212, 46
               

               
Conread position:
               
120-378
               

               
Cow position:
               
chr21:43300856-43300600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
26, 48
               

               
Conread position:
               
120-386
               

               
Cow position:
               
chr21:3498299-3498556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
120-392
               

               
Cow position:
               
chr21:48108066-48107806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
42, 96
               

               
Conread position:
               
120-394
               

               
Cow position:
               
chr21:9310844-9311116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 136
               

               
Conread position:
               
120-401
               

               
Cow position:
               
chr21:8125995-8125727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
119, 22
               

               
Conread position:
               
120-402
               

               
Cow position:
               
chr21:32665971-32665697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
242, 24
               

               
Conread position:
               
120-407
               

               
Cow position:
               
chr21:2679353-2679640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
32, 42
               

               
Conread position:
               
120-409
               

               
Cow position:
               
chr21:28626042-28626326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 47
               

               
Conread position:
               
120-409
               

               
Cow position:
               
chr21:34653885-34654158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
215, 40
               

               
Conread position:
               
120-411
               

               
Cow position:
               
chr21:33522-33806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
120-411
               

               
Cow position:
               
chr21:3381280-3380991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
158, 46
               

               
Conread position:
               
120-411
               

               
Cow position:
               
chr21:6623944-6624244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
79, 45
               

               
Conread position:
               
120-411
               

               
Cow position:
               
chr21:17936171-17936459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
151, 41
               

               
Conread position:
               
120-411
               

               
Cow position:
               
chr21:19258627-19258909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
28, 48
               

               
Conread position:
               
120-411
               

               
Cow position:
               
chr21:40133956-40134244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
28, 45
               

               
Conread position:
               
120-411
               

               
Cow position:
               
chr21:41597616-41597898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
120-411
               

               
Cow position:
               
chr21:41878277-41878558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
120-419
               

               
Cow position:
               
chr21:22860803-22861098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 46
               

               
Conread position:
               
120-421
               

               
Cow position:
               
chr21:31662261-31662563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
177, 41
               

               
Conread position:
               
120-455
               

               
Cow position:
               
chr21:41579552-41579882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
158, 33
               

               
Conread position:
               
121-338
               

               
Cow position:
               
chr21:30616680-30616898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
151, 48
               

               
Conread position:
               
121-365
               

               
Cow position:
               
chr21:15445277-15445031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
32, 46
               

               
Conread position:
               
121-412
               

               
Cow position:
               
chr21:46849321-46849039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
32, 43
               

               
Conread position:
               
121-421
               

               
Cow position:
               
chr21:3361212-3360920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
224, 45
               

               
Conread position:
               
122-311
               

               
Cow position:
               
chr21:42465632-42465820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
26, 46
               

               
Conread position:
               
122-415
               

               
Cow position:
               
chr21:8549484-8549773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
150, 21
               

               
Conread position:
               
122-421
               

               
Cow position:
               
chr21:4282065-4281779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
31, 45
               

               
Conread position:
               
122-425
               

               
Cow position:
               
chr21:10514610-10514907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 45
               

               
Conread position:
               
123-435
               

               
Cow position:
               
chr21:34565409-34565098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
30, 40
               

               
Conread position:
               
123-439
               

               
Cow position:
               
chr21:21169695-21169377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
18, 121
               

               
Conread position:
               
124-353
               

               
Cow position:
               
chr21:31253340-31253575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 29
               

               
Conread position:
               
125-366
               

               
Cow position:
               
chr21:43272048-43271809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
147, 49
               

               
Conread position:
               
125-387
               

               
Cow position:
               
chr21:5238201-5238450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
29, 38
               

               
Conread position:
               
125-407
               

               
Cow position:
               
chr21:21077135-21077409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 40
               

               
Conread position:
               
125-411
               

               
Cow position:
               
chr21:1058883-1059166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
155, 42
               

               
Conread position:
               
125-411
               

               
Cow position:
               
chr21:42135818-42135529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 42
               

               
Conread position:
               
125-411
               

               
Cow position:
               
chr21:47067081-47066811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
166, 27
               

               
Conread position:
               
125-413
               

               
Cow position:
               
chr21:29002356-29002066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 42
               

               
Conread position:
               
125-416
               

               
Cow position:
               
chr21:23568014-23568316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
27, 42
               

               
Conread position:
               
125-421
               

               
Cow position:
               
chr21:1591357-1591650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
123, 28
               

               
Conread position:
               
125-435
               

               
Cow position:
               
chr21:28955328-28955619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
24, 42
               

               
Conread position:
               
125-520
               

               
Cow position:
               
chr21:8351498-8351122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 42
               

               
Conread position:
               
125-520
               

               
Cow position:
               
chr21:35569578-35569193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 28
               

               
Conread position:
               
126-353
               

               
Cow position:
               
chr21:29979950-29979729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
9, 42
               

               
Conread position:
               
126-402
               

               
Cow position:
               
chr21:38449645-38449367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
27, 41
               

               
Conread position:
               
126-411
               

               
Cow position:
               
chr21:32339928-32339653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
24, 17
               

               
Conread position:
               
126-421
               

               
Cow position:
               
chr21:10118360-10118655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
22, 41
               

               
Conread position:
               
126-450
               

               
Cow position:
               
chr21:3763930-3763619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
127-307
               

               
Cow position:
               
chr21:17643162-17642981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
83, 26
               

               
Conread position:
               
127-353
               

               
Cow position:
               
chr21:13850263-13850034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
21, 36
               

               
Conread position:
               
127-413
               

               
Cow position:
               
chr21:39450358-39450072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
146, 8
               

               
Conread position:
               
127-419
               

               
Cow position:
               
chr21:28443571-28443281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
128-409
               

               
Cow position:
               
chr21:5426755-5427025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
147, 17
               

               
Conread position:
               
128-411
               

               
Cow position:
               
chr21:32559545-32559278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
26, 39
               

               
Conread position:
               
128-458
               

               
Cow position:
               
chr21:25286318-25286646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
169, 25
               

               
Conread position:
               
129-455
               

               
Cow position:
               
chr21:12801934-12801621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
203, 24
               

               
Conread position:
               
130-400
               

               
Cow position:
               
chr21:40589672-40589408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
205, 31
               

               
Conread position:
               
130-411
               

               
Cow position:
               
chr21:6102458-6102174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
36, 131
               

               
Conread position:
               
131-368
               

               
Cow position:
               
chr21:18494778-18495015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
204, 36
               

               
Conread position:
               
131-368
               

               
Cow position:
               
chr21:48251218-48250982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
18, 36
               

               
Conread position:
               
131-375
               

               
Cow position:
               
chr21:17428315-17428551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
22, 39
               

               
Conread position:
               
131-398
               

               
Cow position:
               
chr21:47465309-47465044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 37
               

               
Conread position:
               
131-401
               

               
Cow position:
               
chr21:45473946-45473681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
35, 22
               

               
Conread position:
               
131-407
               

               
Cow position:
               
chr21:14452042-14452317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
44, 35
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr21:45330796-45330517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
22, 33
               

               
Conread position:
               
131-411
               

               
Cow position:
               
chr21:45355648-45355920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 36
               

               
Conread position:
               
131-419
               

               
Cow position:
               
chr21:13365153-13365438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
33, 97
               

               
Conread position:
               
131-425
               

               
Cow position:
               
chr21:18828497-18828202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 35
               

               
Conread position:
               
131-425
               

               
Cow position:
               
chr21:47764300-47764017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
80, 32
               

               
Conread position:
               
132-347
               

               
Cow position:
               
chr21:28027616-28027832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 35
               

               
Conread position:
               
132-455
               

               
Cow position:
               
chr21:18845202-18844883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
86, 32
               

               
Conread position:
               
136-398
               

               
Cow position:
               
chr21:47215364-47215117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
18, 33
               

               
Conread position:
               
136-409
               

               
Cow position:
               
chr21:28190845-28191119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
17, 31
               

               
Conread position:
               
136-411
               

               
Cow position:
               
chr21:46143760-46144046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
17, 31
               

               
Conread position:
               
137-425
               

               
Cow position:
               
chr21:15911218-15911503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
16, 30
               

               
Conread position:
               
137-520
               

               
Cow position:
               
chr21:13488337-13488723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 30
               

               
Conread position:
               
138-411
               

               
Cow position:
               
chr21:802475-802230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
138-411
               

               
Cow position:
               
chr21:9990333-9990597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
138-434
               

               
Cow position:
               
chr21:42023943-42024232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
10, 29
               

               
Conread position:
               
139-430
               

               
Cow position:
               
chr21:45375436-45375720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
80, 27
               

               
Conread position:
               
141-411
               

               
Cow position:
               
chr21:8235722-8235468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
194, 24
               

               
Conread position:
               
142-386
               

               
Cow position:
               
chr21:41198588-41198337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
138, 19
               

               
Conread position:
               
142-394
               

               
Cow position:
               
chr21:9301031-9301287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
32, 14
               

               
Conread position:
               
146-418
               

               
Cow position:
               
chr21:30592476-30592210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
188, 20
               

               
Conread position:
               
147-383
               

               
Cow position:
               
chr21:17183751-17183981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
133, 19
               

               
Conread position:
               
147-411
               

               
Cow position:
               
chr21:17174971-17175234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
127, 71
               

               
Conread position:
               
147-413
               

               
Cow position:
               
chr21:27146163-27145905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
147-421
               

               
Cow position:
               
chr21:37345273-37345005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
124, 19
               

               
Conread position:
               
147-438
               

               
Cow position:
               
chr21:18790727-18790449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
131, 19
               

               
Conread position:
               
148-394
               

               
Cow position:
               
chr21:47495827-47495589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
124, 19
               

               
Conread position:
               
148-411
               

               
Cow position:
               
chr21:19363634-19363372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 18
               

               
Conread position:
               
149-385
               

               
Cow position:
               
chr21:41455122-41454887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
186, 138
               

               
Conread position:
               
150-421
               

               
Cow position:
               
chr21:10000912-10001171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
128, 16
               

               
Conread position:
               
150-430
               

               
Cow position:
               
chr21:23311113-23310847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
131, 17
               

               
Conread position:
               
153-413
               

               
Cow position:
               
chr21:27624547-27624787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
182, 12
               

               
Conread position:
               
153-421
               

               
Cow position:
               
chr21:24642351-24642617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
30, 57
               

               
Conread position:
               
156-415
               

               
Cow position:
               
chr21:15610986-15611236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
10, 66
               

               
Conread position:
               
161-419
               

               
Cow position:
               
chr21:28244316-28244566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
174, 60
               

               
Conread position:
               
164-306
               

               
Cow position:
               
chr21:14125889-14126030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
164-411
               

               
Cow position:
               
chr21:41590713-41590478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
199, 84
               

               
Conread position:
               
164-419
               

               
Cow position:
               
chr21:45921215-45920962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
97, 45
               

               
Conread position:
               
164-421
               

               
Cow position:
               
chr21:13840166-13840423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
101, 36
               

               
Conread position:
               
167-415
               

               
Cow position:
               
chr21:6910037-6909789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
105, 182
               

               
Conread position:
               
168-411
               

               
Cow position:
               
chr21:28989460-28989697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
177-445
               

               
Cow position:
               
chr21:10005029-10004768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
158, 64
               

               
Conread position:
               
178-401
               

               
Cow position:
               
chr21:39809757-39809971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
41, 25
               

               
Conread position:
               
180-411
               

               
Cow position:
               
chr21:17875336-17875106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
91, 169
               

               
Conread position:
               
180-516
               

               
Cow position:
               
chr21:2293852-2294190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
100, 39
               

               
Conread position:
               
181-411
               

               
Cow position:
               
chr21:19412158-19411928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
91, 155
               

               
Conread position:
               
183-400
               

               
Cow position:
               
chr21:12723019-12723231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
183-410
               

               
Cow position:
               
chr21:14515708-14515927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
57, 169
               

               
Conread position:
               
184-401
               

               
Cow position:
               
chr21:48176690-48176901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
150, 60
               

               
Conread position:
               
184-402
               

               
Cow position:
               
chr21:48234295-48234088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
151, 29
               

               
Conread position:
               
184-405
               

               
Cow position:
               
chr21:44733298-44733092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
151, 87
               

               
Conread position:
               
184-411
               

               
Cow position:
               
chr21:11250729-11250960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
87, 174
               

               
Conread position:
               
184-411
               

               
Cow position:
               
chr21:11359901-11360123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
151, 65
               

               
Conread position:
               
184-411
               

               
Cow position:
               
chr21:29978899-29978673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
42, 110
               

               
Conread position:
               
184-417
               

               
Cow position:
               
chr21:18800665-18800447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
184-419
               

               
Cow position:
               
chr21:957531-957768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
34, 108
               

               
Conread position:
               
184-421
               

               
Cow position:
               
chr21:20152811-20153052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
92, 51
               

               
Conread position:
               
185-338
               

               
Cow position:
               
chr21:17697000-17696849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
185-363
               

               
Cow position:
               
chr21:31511154-31511328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
149, 41
               

               
Conread position:
               
185-420
               

               
Cow position:
               
chr21:12462106-12461872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
150, 29
               

               
Conread position:
               
187-421
               

               
Cow position:
               
chr21:15584547-15584323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
148, 43
               

               
Conread position:
               
188-402
               

               
Cow position:
               
chr21:28617455-28617669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
85, 46
               

               
Conread position:
               
189-421
               

               
Cow position:
               
chr21:20418821-20418586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 228
               

               
Conread position:
               
190-421
               

               
Cow position:
               
chr21:34151450-34151682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
91, 35
               

               
Conread position:
               
191-398
               

               
Cow position:
               
chr21:17856414-17856618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
143, 83
               

               
Conread position:
               
191-421
               

               
Cow position:
               
chr21:20260450-20260223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
145, 21
               

               
Conread position:
               
194-363
               

               
Cow position:
               
chr21:27810278-27810448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
197-408
               

               
Cow position:
               
chr21:30222218-30222429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
140, 48
               

               
Conread position:
               
198-402
               

               
Cow position:
               
chr21:36789671-36789873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
138, 76
               

               
Conread position:
               
201-411
               

               
Cow position:
               
chr21:18155693-18155479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
206-420
               

               
Cow position:
               
chr21:25629026-25628815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
128, 50
               

               
Conread position:
               
207-411
               

               
Cow position:
               
chr21:34722903-34722701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
127, 139
               

               
Conread position:
               
208-383
               

               
Cow position:
               
chr21:21143785-21143960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
70, 55
               

               
Conread position:
               
210-394
               

               
Cow position:
               
chr21:4568170-4568355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 83
               

               
Conread position:
               
211-401
               

               
Cow position:
               
chr21:38664526-38664716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
120, 13
               

               
Conread position:
               
211-411
               

               
Cow position:
               
chr21:18041961-18041760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 148
               

               
Conread position:
               
213-407
               

               
Cow position:
               
chr21:20192790-20192980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
5, 33
               

               
Conread position:
               
213-411
               

               
Cow position:
               
chr21:35354422-35354618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
122, 161
               

               
Conread position:
               
213-411
               

               
Cow position:
               
chr21:40168741-40168538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
216-421
               

               
Cow position:
               
chr21:23980290-23980086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
62, 140
               

               
Conread position:
               
217-397
               

               
Cow position:
               
chr21:18414943-18415126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 148
               

               
Conread position:
               
217-428
               

               
Cow position:
               
chr21:5985425-5985216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
54, 132
               

               
Conread position:
               
217-455
               

               
Cow position:
               
chr21:10673024-10673247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
218-402
               

               
Cow position:
               
chr21:2260465-2260286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
6, 32
               

               
Conread position:
               
218-423
               

               
Cow position:
               
chr21:8206665-8206870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
6, 57
               

               
Conread position:
               
218-454
               

               
Cow position:
               
chr21:16914669-16914903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
54, 115
               

               
Conread position:
               
222-411
               

               
Cow position:
               
chr21:29224964-29224773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
53, 140
               

               
Conread position:
               
226-411
               

               
Cow position:
               
chr21:10561682-10561496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
109, 129
               

               
Conread position:
               
226-421
               

               
Cow position:
               
chr21:26244825-26245010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
108, 22
               

               
Conread position:
               
228-521
               

               
Cow position:
               
chr21:36756507-36756785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
37, 17
               

               
Conread position:
               
231-411
               

               
Cow position:
               
chr21:45906714-45906536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
104, 125
               

               
Conread position:
               
235-411
               

               
Cow position:
               
chr21:31090509-31090340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
125, 75
               

               
Conread position:
               
245-411
               

               
Cow position:
               
chr21:37014482-37014319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
33, 88
               

               
Conread position:
               
248-410
               

               
Cow position:
               
chr21:4280748-4280586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
87, 60
               

               
Conread position:
               
249-411
               

               
Cow position:
               
chr21:46552181-46552016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
249-417
               

               
Cow position:
               
chr21:33360109-33359941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
29, 111
               

               
Conread position:
               
251-411
               

               
Cow position:
               
chr21:16569828-16569988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
84, 98
               

               
Conread position:
               
252-419
               

               
Cow position:
               
chr21:8349256-8349427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
253-411
               

               
Cow position:
               
chr21:35899770-35899931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
7, 115
               

               
Conread position:
               
253-421
               

               
Cow position:
               
chr21:44214053-44214223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
84, 165
               

               
Conread position:
               
256-401
               

               
Cow position:
               
chr21:45262880-45262733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 67
               

               
Conread position:
               
256-411
               

               
Cow position:
               
chr21:1511223-1511380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
79, 106
               

               
Conread position:
               
256-417
               

               
Cow position:
               
chr21:40266053-40266217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
19, 160
               

               
Conread position:
               
256-420
               

               
Cow position:
               
chr21:19210646-19210809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 99
               

               
Conread position:
               
267-411
               

               
Cow position:
               
chr21:297696-297841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
73, 38
               

               
Conread position:
               
267-411
               

               
Cow position:
               
chr21:12339582-12339728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
70, 27
               

               
Conread position:
               
270-402
               

               
Cow position:
               
chr21:41598064-41598198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
277-422
               

               
Cow position:
               
chr21:47363785-47363639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 140
               

               
Conread position:
               
278-411
               

               
Cow position:
               
chr21:22014141-22014277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
281-409
               

               
Cow position:
               
chr21:742245-742372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 21
               

               
Conread position:
               
286-520
               

               
Cow position:
               
chr21:45835440-45835218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
48, 64
               

               
Conread position:
               
299-425
               

               
Cow position:
               
chr21:28030263-28030391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               
Show alignments to all cow chromosomes.