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Cow genome map

           
Conread name:
           
rthg20_o8.y1
        

               
Conread position:
               
27-348
               

               
Cow position:
               
chr22:12381550-12381859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 80
               

               
Conread position:
               
27-387
               

               
Cow position:
               
chr22:15068059-15068423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
21, 123
               

               
Conread position:
               
31-393
               

               
Cow position:
               
chr22:2148208-2148575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
17, 94
               

               
Conread position:
               
34-413
               

               
Cow position:
               
chr22:43397679-43398024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
40-320
               

               
Cow position:
               
chr22:36208593-36208866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
55, 67
               

               
Conread position:
               
41-411
               

               
Cow position:
               
chr22:33485938-33485596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
51, 89
               

               
Conread position:
               
44-411
               

               
Cow position:
               
chr22:22861242-22860891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 82
               

               
Conread position:
               
44-439
               

               
Cow position:
               
chr22:1601838-1602240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
51, 21
               

               
Conread position:
               
46-301
               

               
Cow position:
               
chr22:45106248-45106004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
100, 60
               

               
Conread position:
               
47-246
               

               
Cow position:
               
chr22:2080610-2080417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
106, 24
               

               
Conread position:
               
47-247
               

               
Cow position:
               
chr22:38959708-38959515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
59, 75
               

               
Conread position:
               
47-282
               

               
Cow position:
               
chr22:898430-898652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
103, 59
               

               
Conread position:
               
47-283
               

               
Cow position:
               
chr22:28120463-28120688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
106, 59
               

               
Conread position:
               
47-296
               

               
Cow position:
               
chr22:4138433-4138197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
59, 21
               

               
Conread position:
               
47-304
               

               
Cow position:
               
chr22:41136987-41137228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
47-307
               

               
Cow position:
               
chr22:43788458-43788207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
118, 59
               

               
Conread position:
               
47-309
               

               
Cow position:
               
chr22:8357286-8357532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
60, 80
               

               
Conread position:
               
47-313
               

               
Cow position:
               
chr22:14844238-14844498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
224, 59
               

               
Conread position:
               
47-313
               

               
Cow position:
               
chr22:23250037-23249785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
102, 50
               

               
Conread position:
               
47-319
               

               
Cow position:
               
chr22:8732889-8732629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
147, 57
               

               
Conread position:
               
47-320
               

               
Cow position:
               
chr22:30583162-30583421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
59, 79
               

               
Conread position:
               
47-320
               

               
Cow position:
               
chr22:34665725-34665978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
231, 12
               

               
Conread position:
               
47-326
               

               
Cow position:
               
chr22:34931081-34930809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
102, 50
               

               
Conread position:
               
47-327
               

               
Cow position:
               
chr22:42777829-42778110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
60, 121
               

               
Conread position:
               
47-329
               

               
Cow position:
               
chr22:1610084-1609819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
106, 59
               

               
Conread position:
               
47-329
               

               
Cow position:
               
chr22:31513435-31513148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
22, 51
               

               
Conread position:
               
47-333
               

               
Cow position:
               
chr22:11200718-11200978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
47-333
               

               
Cow position:
               
chr22:22048305-22048030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
225, 59
               

               
Conread position:
               
47-347
               

               
Cow position:
               
chr22:13017108-13016838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
171, 17
               

               
Conread position:
               
47-347
               

               
Cow position:
               
chr22:15960103-15959810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 84
               

               
Conread position:
               
47-356
               

               
Cow position:
               
chr22:25476738-25477025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
59, 34
               

               
Conread position:
               
47-360
               

               
Cow position:
               
chr22:16620851-16621147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
103, 57
               

               
Conread position:
               
47-362
               

               
Cow position:
               
chr22:9251345-9251042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
59, 78
               

               
Conread position:
               
47-364
               

               
Cow position:
               
chr22:15919963-15919653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 80
               

               
Conread position:
               
47-367
               

               
Cow position:
               
chr22:13242108-13242416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
59, 79
               

               
Conread position:
               
47-368
               

               
Cow position:
               
chr22:14091556-14091246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
192, 50
               

               
Conread position:
               
47-377
               

               
Cow position:
               
chr22:44740778-44741070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
59, 79
               

               
Conread position:
               
47-378
               

               
Cow position:
               
chr22:1342414-1342725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
288, 50
               

               
Conread position:
               
47-384
               

               
Cow position:
               
chr22:1791664-1791976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
182, 53
               

               
Conread position:
               
47-385
               

               
Cow position:
               
chr22:13776590-13776909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
233, 59
               

               
Conread position:
               
47-385
               

               
Cow position:
               
chr22:26316151-26316464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
177, 59
               

               
Conread position:
               
47-385
               

               
Cow position:
               
chr22:40374278-40374603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
59, 79
               

               
Conread position:
               
47-391
               

               
Cow position:
               
chr22:2216474-2216821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
60, 130
               

               
Conread position:
               
47-391
               

               
Cow position:
               
chr22:31870579-31870249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
288, 60
               

               
Conread position:
               
47-394
               

               
Cow position:
               
chr22:9734531-9734858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
99, 50
               

               
Conread position:
               
47-395
               

               
Cow position:
               
chr22:13011605-13011265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 59
               

               
Conread position:
               
47-400
               

               
Cow position:
               
chr22:18258900-18259231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
59, 78
               

               
Conread position:
               
47-400
               

               
Cow position:
               
chr22:35533705-35533342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
60, 130
               

               
Conread position:
               
47-401
               

               
Cow position:
               
chr22:1068243-1067903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 58
               

               
Conread position:
               
47-401
               

               
Cow position:
               
chr22:30712421-30712770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
59, 70
               

               
Conread position:
               
47-401
               

               
Cow position:
               
chr22:39494532-39494187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
101, 58
               

               
Conread position:
               
47-401
               

               
Cow position:
               
chr22:40071641-40071987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
97, 59
               

               
Conread position:
               
47-402
               

               
Cow position:
               
chr22:6721392-6721067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
313, 58
               

               
Conread position:
               
47-402
               

               
Cow position:
               
chr22:9127066-9127419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 51
               

               
Conread position:
               
47-402
               

               
Cow position:
               
chr22:11500453-11500790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
35, 60
               

               
Conread position:
               
47-402
               

               
Cow position:
               
chr22:17950281-17949961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
101, 36
               

               
Conread position:
               
47-402
               

               
Cow position:
               
chr22:21012065-21012396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
106, 50
               

               
Conread position:
               
47-402
               

               
Cow position:
               
chr22:33094233-33094574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
225, 58
               

               
Conread position:
               
47-402
               

               
Cow position:
               
chr22:45513848-45513508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
179, 58
               

               
Conread position:
               
47-406
               

               
Cow position:
               
chr22:14986365-14986000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
59, 53
               

               
Conread position:
               
47-406
               

               
Cow position:
               
chr22:28179516-28179873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
106, 50
               

               
Conread position:
               
47-407
               

               
Cow position:
               
chr22:2623873-2623502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
53, 139
               

               
Conread position:
               
47-408
               

               
Cow position:
               
chr22:21355489-21355124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
61, 106
               

               
Conread position:
               
47-409
               

               
Cow position:
               
chr22:4645450-4645791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
288, 26
               

               
Conread position:
               
47-409
               

               
Cow position:
               
chr22:8876943-8877283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
59, 79
               

               
Conread position:
               
47-409
               

               
Cow position:
               
chr22:10631047-10631404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 59
               

               
Conread position:
               
47-409
               

               
Cow position:
               
chr22:11613100-11613442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 78
               

               
Conread position:
               
47-409
               

               
Cow position:
               
chr22:13957973-13957626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
101, 14
               

               
Conread position:
               
47-409
               

               
Cow position:
               
chr22:32892372-32892711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 59
               

               
Conread position:
               
47-410
               

               
Cow position:
               
chr22:14925048-14924713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
106, 36
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr22:590020-590359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
288, 59
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr22:891467-891122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
288, 59
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr22:1279714-1279365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
105, 59
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr22:1326093-1326439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
97, 15
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr22:3251314-3250974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
290, 50
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr22:4017148-4017497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 15
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr22:4043609-4043953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
101, 17
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr22:4076226-4075867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
229, 58
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr22:4563019-4563382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
53, 118
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr22:4990499-4990147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
288, 57
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr22:8323919-8324259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 60
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr22:9977489-9977830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 60
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr22:10161638-10161987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
59, 47
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr22:10532168-10532520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
179, 59
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr22:12682123-12681780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 62
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr22:14366282-14365938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr22:14882439-14882092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
106, 59
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr22:17152351-17152697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
103, 57
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr22:18196180-18196531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
107, 59
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr22:20626514-20626857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 63
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr22:21502408-21502765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 55
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr22:23176787-23176421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
59, 71
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr22:25743295-25742929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 61
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr22:25943153-25943495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
59, 79
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr22:26097938-26097599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 50
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr22:26134560-26134204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
59, 50
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr22:26151447-26151092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 61
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr22:29290464-29290119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
290, 55
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr22:30698852-30699201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 60
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr22:34398783-34398436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
102, 59
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr22:34441974-34441613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 50
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr22:39508359-39508020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
42, 32
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr22:40720615-40720275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
288, 58
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr22:43292230-43291877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 59
               

               
Conread position:
               
47-417
               

               
Cow position:
               
chr22:7153554-7153910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
119, 59
               

               
Conread position:
               
47-417
               

               
Cow position:
               
chr22:11146577-11146939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
225, 50
               

               
Conread position:
               
47-419
               

               
Cow position:
               
chr22:864848-864486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 56
               

               
Conread position:
               
47-419
               

               
Cow position:
               
chr22:10685407-10685059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
313, 50
               

               
Conread position:
               
47-419
               

               
Cow position:
               
chr22:18926026-18926385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
295, 57
               

               
Conread position:
               
47-419
               

               
Cow position:
               
chr22:28370618-28370973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 57
               

               
Conread position:
               
47-420
               

               
Cow position:
               
chr22:5337925-5337570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
106, 21
               

               
Conread position:
               
47-420
               

               
Cow position:
               
chr22:17993358-17993003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 56
               

               
Conread position:
               
47-421
               

               
Cow position:
               
chr22:877195-877546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
230, 58
               

               
Conread position:
               
47-421
               

               
Cow position:
               
chr22:10420681-10421061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
79, 60
               

               
Conread position:
               
47-421
               

               
Cow position:
               
chr22:10920189-10919823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
105, 44
               

               
Conread position:
               
47-421
               

               
Cow position:
               
chr22:18837929-18838283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
287, 59
               

               
Conread position:
               
47-421
               

               
Cow position:
               
chr22:23856720-23857075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
121, 59
               

               
Conread position:
               
47-421
               

               
Cow position:
               
chr22:34597604-34597963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
164, 58
               

               
Conread position:
               
47-421
               

               
Cow position:
               
chr22:34726346-34726697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
234, 57
               

               
Conread position:
               
47-421
               

               
Cow position:
               
chr22:44180265-44180622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
99, 56
               

               
Conread position:
               
47-425
               

               
Cow position:
               
chr22:8481320-8481677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 58
               

               
Conread position:
               
47-426
               

               
Cow position:
               
chr22:41271318-41270967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 58
               

               
Conread position:
               
47-427
               

               
Cow position:
               
chr22:44463203-44463567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
59, 79
               

               
Conread position:
               
47-434
               

               
Cow position:
               
chr22:11837529-11837168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
97, 59
               

               
Conread position:
               
47-435
               

               
Cow position:
               
chr22:36569870-36569507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 54
               

               
Conread position:
               
47-437
               

               
Cow position:
               
chr22:41045242-41044862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
60, 80
               

               
Conread position:
               
47-439
               

               
Cow position:
               
chr22:30954711-30955074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
47-444
               

               
Cow position:
               
chr22:30710077-30710455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
225, 59
               

               
Conread position:
               
47-445
               

               
Cow position:
               
chr22:28071229-28071610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 36
               

               
Conread position:
               
47-446
               

               
Cow position:
               
chr22:30689303-30689696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 61
               

               
Conread position:
               
47-453
               

               
Cow position:
               
chr22:22160393-22160785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 59
               

               
Conread position:
               
47-455
               

               
Cow position:
               
chr22:11778941-11778551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
40, 60
               

               
Conread position:
               
47-458
               

               
Cow position:
               
chr22:1266267-1265859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
182, 59
               

               
Conread position:
               
47-466
               

               
Cow position:
               
chr22:19788011-19787602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
171, 56
               

               
Conread position:
               
47-507
               

               
Cow position:
               
chr22:911777-912218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
301, 24
               

               
Conread position:
               
47-517
               

               
Cow position:
               
chr22:14005823-14006278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
228, 57
               

               
Conread position:
               
47-518
               

               
Cow position:
               
chr22:38940276-38939839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 48
               

               
Conread position:
               
48-391
               

               
Cow position:
               
chr22:18654379-18654043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
192, 58
               

               
Conread position:
               
48-401
               

               
Cow position:
               
chr22:2701901-2702241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
100, 57
               

               
Conread position:
               
48-409
               

               
Cow position:
               
chr22:27329212-27328874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
210, 39
               

               
Conread position:
               
48-411
               

               
Cow position:
               
chr22:3960623-3960263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
225, 56
               

               
Conread position:
               
48-421
               

               
Cow position:
               
chr22:40349019-40349374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
48-476
               

               
Cow position:
               
chr22:21296050-21295644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 57
               

               
Conread position:
               
49-328
               

               
Cow position:
               
chr22:1710238-1710510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
58, 85
               

               
Conread position:
               
49-333
               

               
Cow position:
               
chr22:16235976-16235707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
35, 31
               

               
Conread position:
               
49-338
               

               
Cow position:
               
chr22:3730965-3730689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
285, 57
               

               
Conread position:
               
49-361
               

               
Cow position:
               
chr22:30472720-30473017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
48, 77
               

               
Conread position:
               
49-377
               

               
Cow position:
               
chr22:5282182-5282492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
104, 75
               

               
Conread position:
               
49-387
               

               
Cow position:
               
chr22:34611143-34611468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
231, 60
               

               
Conread position:
               
49-394
               

               
Cow position:
               
chr22:31213243-31213582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
104, 65
               

               
Conread position:
               
49-400
               

               
Cow position:
               
chr22:10937158-10936833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
105, 20
               

               
Conread position:
               
49-402
               

               
Cow position:
               
chr22:33415336-33415010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
215, 49
               

               
Conread position:
               
49-409
               

               
Cow position:
               
chr22:41971479-41971136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
287, 55
               

               
Conread position:
               
49-411
               

               
Cow position:
               
chr22:2095223-2095573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
223, 56
               

               
Conread position:
               
49-411
               

               
Cow position:
               
chr22:4535649-4535305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
228, 46
               

               
Conread position:
               
49-411
               

               
Cow position:
               
chr22:8418142-8418481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
229, 57
               

               
Conread position:
               
49-411
               

               
Cow position:
               
chr22:9685694-9686049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
204, 57
               

               
Conread position:
               
49-411
               

               
Cow position:
               
chr22:10122063-10122399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
57, 52
               

               
Conread position:
               
49-411
               

               
Cow position:
               
chr22:13735585-13735254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
286, 36
               

               
Conread position:
               
49-411
               

               
Cow position:
               
chr22:23865136-23865490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 57
               

               
Conread position:
               
49-417
               

               
Cow position:
               
chr22:22155275-22155630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
163, 57
               

               
Conread position:
               
49-418
               

               
Cow position:
               
chr22:39747931-39747578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
102, 45
               

               
Conread position:
               
49-421
               

               
Cow position:
               
chr22:15337791-15338144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
57, 48
               

               
Conread position:
               
49-421
               

               
Cow position:
               
chr22:16532740-16533103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 75
               

               
Conread position:
               
49-421
               

               
Cow position:
               
chr22:19340874-19341230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
225, 57
               

               
Conread position:
               
49-421
               

               
Cow position:
               
chr22:25246584-25246941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
213, 58
               

               
Conread position:
               
49-421
               

               
Cow position:
               
chr22:33901401-33901055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
57, 77
               

               
Conread position:
               
49-423
               

               
Cow position:
               
chr22:31646168-31646525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 77
               

               
Conread position:
               
49-427
               

               
Cow position:
               
chr22:30206574-30206214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
97, 12
               

               
Conread position:
               
49-436
               

               
Cow position:
               
chr22:15951204-15950833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
43, 68
               

               
Conread position:
               
49-455
               

               
Cow position:
               
chr22:6610675-6610292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
169, 26
               

               
Conread position:
               
49-455
               

               
Cow position:
               
chr22:8412198-8412587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
101, 57
               

               
Conread position:
               
49-514
               

               
Cow position:
               
chr22:36540001-36539555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
222, 48
               

               
Conread position:
               
50-333
               

               
Cow position:
               
chr22:19241514-19241242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
56, 76
               

               
Conread position:
               
50-372
               

               
Cow position:
               
chr22:21593307-21593621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
212, 56
               

               
Conread position:
               
50-409
               

               
Cow position:
               
chr22:17764050-17764400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 54
               

               
Conread position:
               
50-411
               

               
Cow position:
               
chr22:10339449-10339095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 118
               

               
Conread position:
               
50-411
               

               
Cow position:
               
chr22:46568214-46567871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
103, 56
               

               
Conread position:
               
50-421
               

               
Cow position:
               
chr22:6622570-6622218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
56, 73
               

               
Conread position:
               
50-455
               

               
Cow position:
               
chr22:3987187-3987577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
222, 56
               

               
Conread position:
               
51-385
               

               
Cow position:
               
chr22:27818676-27819003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
102, 55
               

               
Conread position:
               
53-306
               

               
Cow position:
               
chr22:33986087-33985847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
53-333
               

               
Cow position:
               
chr22:11987536-11987272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
96, 44
               

               
Conread position:
               
53-347
               

               
Cow position:
               
chr22:13206166-13205882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
101, 51
               

               
Conread position:
               
53-402
               

               
Cow position:
               
chr22:15039507-15039173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 47
               

               
Conread position:
               
53-411
               

               
Cow position:
               
chr22:226758-226434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
282, 53
               

               
Conread position:
               
53-411
               

               
Cow position:
               
chr22:16251888-16251550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
6, 54
               

               
Conread position:
               
53-411
               

               
Cow position:
               
chr22:33448408-33448061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
53, 74
               

               
Conread position:
               
53-414
               

               
Cow position:
               
chr22:16044751-16044393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 53
               

               
Conread position:
               
53-419
               

               
Cow position:
               
chr22:1696536-1696888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
53, 44
               

               
Conread position:
               
53-423
               

               
Cow position:
               
chr22:30514933-30515286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
282, 53
               

               
Conread position:
               
53-455
               

               
Cow position:
               
chr22:42605312-42605696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
229, 55
               

               
Conread position:
               
53-518
               

               
Cow position:
               
chr22:6202591-6203050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
101, 51
               

               
Conread position:
               
53-520
               

               
Cow position:
               
chr22:5467690-5467248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
53, 73
               

               
Conread position:
               
54-364
               

               
Cow position:
               
chr22:26081223-26080917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
99, 53
               

               
Conread position:
               
54-406
               

               
Cow position:
               
chr22:16001165-16001502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
98, 52
               

               
Conread position:
               
54-427
               

               
Cow position:
               
chr22:32487778-32487427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
100, 30
               

               
Conread position:
               
55-338
               

               
Cow position:
               
chr22:44936853-44937131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
217, 51
               

               
Conread position:
               
55-367
               

               
Cow position:
               
chr22:12572879-12573185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
51, 63
               

               
Conread position:
               
55-371
               

               
Cow position:
               
chr22:27385362-27385050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
200, 51
               

               
Conread position:
               
55-385
               

               
Cow position:
               
chr22:39472696-39472382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
93, 51
               

               
Conread position:
               
55-401
               

               
Cow position:
               
chr22:1484542-1484873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
93, 51
               

               
Conread position:
               
55-411
               

               
Cow position:
               
chr22:4119888-4119542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 51
               

               
Conread position:
               
55-411
               

               
Cow position:
               
chr22:18021338-18021012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
51, 42
               

               
Conread position:
               
55-411
               

               
Cow position:
               
chr22:34476320-34475980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
205, 51
               

               
Conread position:
               
55-421
               

               
Cow position:
               
chr22:10302691-10303045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 71
               

               
Conread position:
               
55-421
               

               
Cow position:
               
chr22:37324214-37324573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
43, 70
               

               
Conread position:
               
55-437
               

               
Cow position:
               
chr22:21890679-21890312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
280, 49
               

               
Conread position:
               
56-445
               

               
Cow position:
               
chr22:6601005-6600631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
97, 50
               

               
Conread position:
               
58-411
               

               
Cow position:
               
chr22:40048242-40048577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
63, 7
               

               
Conread position:
               
62-306
               

               
Cow position:
               
chr22:22013408-22013635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
216, 44
               

               
Conread position:
               
64-412
               

               
Cow position:
               
chr22:21746328-21746666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
102, 42
               

               
Conread position:
               
65-411
               

               
Cow position:
               
chr22:5290533-5290870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
7, 42
               

               
Conread position:
               
65-425
               

               
Cow position:
               
chr22:7913169-7913512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
205, 42
               

               
Conread position:
               
65-436
               

               
Cow position:
               
chr22:8063634-8063287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
221, 40
               

               
Conread position:
               
67-419
               

               
Cow position:
               
chr22:2502530-2502854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
212, 39
               

               
Conread position:
               
71-411
               

               
Cow position:
               
chr22:41829547-41829220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
79, 27
               

               
Conread position:
               
71-483
               

               
Cow position:
               
chr22:26490155-26490568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 35
               

               
Conread position:
               
72-333
               

               
Cow position:
               
chr22:45291022-45291280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
12, 51
               

               
Conread position:
               
74-426
               

               
Cow position:
               
chr22:3949940-3950285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
136, 32
               

               
Conread position:
               
76-386
               

               
Cow position:
               
chr22:13702265-13701966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
78, 30
               

               
Conread position:
               
77-402
               

               
Cow position:
               
chr22:1974452-1974138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
19, 31
               

               
Conread position:
               
77-445
               

               
Cow position:
               
chr22:14691283-14690920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
39, 27
               

               
Conread position:
               
84-340
               

               
Cow position:
               
chr22:1081197-1081453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
64, 24
               

               
Conread position:
               
87-369
               

               
Cow position:
               
chr22:8446635-8446917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
89, 19
               

               
Conread position:
               
88-328
               

               
Cow position:
               
chr22:29256611-29256374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
10, 42
               

               
Conread position:
               
89-420
               

               
Cow position:
               
chr22:30269115-30269440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
11, 48
               

               
Conread position:
               
97-445
               

               
Cow position:
               
chr22:6493883-6494212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
19, 61
               

               
Conread position:
               
105-425
               

               
Cow position:
               
chr22:1590738-1591057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
11, 23
               

               
Conread position:
               
106-370
               

               
Cow position:
               
chr22:19848675-19848417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
229, 61
               

               
Conread position:
               
106-396
               

               
Cow position:
               
chr22:1822154-1821866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
17, 28
               

               
Conread position:
               
106-411
               

               
Cow position:
               
chr22:2913000-2913299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
165, 15
               

               
Conread position:
               
107-421
               

               
Cow position:
               
chr22:4650903-4651206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
110-386
               

               
Cow position:
               
chr22:29013600-29013876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 29
               

               
Conread position:
               
110-401
               

               
Cow position:
               
chr22:12736050-12736334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 52
               

               
Conread position:
               
111-398
               

               
Cow position:
               
chr22:13861315-13861594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
114-333
               

               
Cow position:
               
chr22:31194799-31195019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
14, 41
               

               
Conread position:
               
116-410
               

               
Cow position:
               
chr22:27171529-27171247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
32, 52
               

               
Conread position:
               
117-411
               

               
Cow position:
               
chr22:7884722-7885010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
33, 50
               

               
Conread position:
               
118-402
               

               
Cow position:
               
chr22:59338-59622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
129, 51
               

               
Conread position:
               
120-320
               

               
Cow position:
               
chr22:2070705-2070902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
158, 41
               

               
Conread position:
               
120-323
               

               
Cow position:
               
chr22:2105523-2105320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
32, 48
               

               
Conread position:
               
120-328
               

               
Cow position:
               
chr22:6204560-6204357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
120-333
               

               
Cow position:
               
chr22:27700948-27701155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
120-333
               

               
Cow position:
               
chr22:47525446-47525647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
120-377
               

               
Cow position:
               
chr22:36546197-36545939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
158, 41
               

               
Conread position:
               
120-402
               

               
Cow position:
               
chr22:15090474-15090753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
32, 48
               

               
Conread position:
               
120-402
               

               
Cow position:
               
chr22:28640418-28640140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
215, 60
               

               
Conread position:
               
120-405
               

               
Cow position:
               
chr22:11370857-11370576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
30, 47
               

               
Conread position:
               
120-408
               

               
Cow position:
               
chr22:13950906-13951197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 33
               

               
Conread position:
               
120-409
               

               
Cow position:
               
chr22:4356833-4357111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
29, 47
               

               
Conread position:
               
120-409
               

               
Cow position:
               
chr22:27431949-27431684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
30, 48
               

               
Conread position:
               
120-411
               

               
Cow position:
               
chr22:4061205-4060927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
215, 23
               

               
Conread position:
               
120-411
               

               
Cow position:
               
chr22:6215820-6215536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
33, 47
               

               
Conread position:
               
120-411
               

               
Cow position:
               
chr22:36563289-36562999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
34, 13
               

               
Conread position:
               
120-416
               

               
Cow position:
               
chr22:30818993-30818702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
132, 41
               

               
Conread position:
               
120-417
               

               
Cow position:
               
chr22:4988825-4988535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
31, 47
               

               
Conread position:
               
120-419
               

               
Cow position:
               
chr22:35753572-35753280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
33, 48
               

               
Conread position:
               
120-421
               

               
Cow position:
               
chr22:25206235-25205942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 46
               

               
Conread position:
               
120-421
               

               
Cow position:
               
chr22:27322053-27322343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
158, 47
               

               
Conread position:
               
120-421
               

               
Cow position:
               
chr22:38930780-38930478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
28, 46
               

               
Conread position:
               
120-423
               

               
Cow position:
               
chr22:3316863-3317154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 49
               

               
Conread position:
               
120-424
               

               
Cow position:
               
chr22:8733588-8733306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
26, 37
               

               
Conread position:
               
120-445
               

               
Cow position:
               
chr22:32326535-32326850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
34, 44
               

               
Conread position:
               
120-514
               

               
Cow position:
               
chr22:33949269-33948876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 33
               

               
Conread position:
               
120-518
               

               
Cow position:
               
chr22:6123161-6122783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 46
               

               
Conread position:
               
120-518
               

               
Cow position:
               
chr22:17813962-17814334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
121-411
               

               
Cow position:
               
chr22:3993345-3993630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 46
               

               
Conread position:
               
121-412
               

               
Cow position:
               
chr22:645025-644745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
149, 45
               

               
Conread position:
               
121-423
               

               
Cow position:
               
chr22:15490394-15490683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
32, 46
               

               
Conread position:
               
122-388
               

               
Cow position:
               
chr22:14602659-14602394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
32, 45
               

               
Conread position:
               
122-403
               

               
Cow position:
               
chr22:6360752-6360474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
27, 45
               

               
Conread position:
               
122-406
               

               
Cow position:
               
chr22:26141010-26141293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 14
               

               
Conread position:
               
122-409
               

               
Cow position:
               
chr22:2403609-2403900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 41
               

               
Conread position:
               
122-411
               

               
Cow position:
               
chr22:14245683-14245421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
241, 22
               

               
Conread position:
               
122-437
               

               
Cow position:
               
chr22:46611045-46610734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 45
               

               
Conread position:
               
125-385
               

               
Cow position:
               
chr22:35902955-35902702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
210, 41
               

               
Conread position:
               
125-387
               

               
Cow position:
               
chr22:45685293-45685024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
83, 44
               

               
Conread position:
               
125-401
               

               
Cow position:
               
chr22:14179092-14178817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
93, 41
               

               
Conread position:
               
125-401
               

               
Cow position:
               
chr22:17852883-17852624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
79, 41
               

               
Conread position:
               
125-402
               

               
Cow position:
               
chr22:27480630-27480904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
146, 36
               

               
Conread position:
               
125-407
               

               
Cow position:
               
chr22:30093985-30094263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
21, 43
               

               
Conread position:
               
125-409
               

               
Cow position:
               
chr22:14143367-14143094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 43
               

               
Conread position:
               
125-409
               

               
Cow position:
               
chr22:19775686-19775414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
220, 41
               

               
Conread position:
               
125-409
               

               
Cow position:
               
chr22:30049835-30049548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
7, 44
               

               
Conread position:
               
125-409
               

               
Cow position:
               
chr22:45271318-45271600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
41, 96
               

               
Conread position:
               
125-411
               

               
Cow position:
               
chr22:845642-845923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 41
               

               
Conread position:
               
125-411
               

               
Cow position:
               
chr22:22612850-22613126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
23, 43
               

               
Conread position:
               
125-411
               

               
Cow position:
               
chr22:24066496-24066209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
212, 107
               

               
Conread position:
               
125-411
               

               
Cow position:
               
chr22:26339498-26339774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
23, 44
               

               
Conread position:
               
125-411
               

               
Cow position:
               
chr22:28058302-28058030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
210, 28
               

               
Conread position:
               
125-411
               

               
Cow position:
               
chr22:34712453-34712746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
24, 41
               

               
Conread position:
               
125-411
               

               
Cow position:
               
chr22:34750416-34750695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
28, 42
               

               
Conread position:
               
125-411
               

               
Cow position:
               
chr22:38439419-38439137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 42
               

               
Conread position:
               
125-411
               

               
Cow position:
               
chr22:41982976-41982698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
26, 42
               

               
Conread position:
               
125-419
               

               
Cow position:
               
chr22:11697470-11697166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
34, 11
               

               
Conread position:
               
125-420
               

               
Cow position:
               
chr22:30483651-30483943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
21, 42
               

               
Conread position:
               
125-421
               

               
Cow position:
               
chr22:11686205-11685904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
21, 43
               

               
Conread position:
               
125-422
               

               
Cow position:
               
chr22:534232-534529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
28, 42
               

               
Conread position:
               
125-436
               

               
Cow position:
               
chr22:41244985-41245292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
41, 51
               

               
Conread position:
               
125-512
               

               
Cow position:
               
chr22:21407947-21408321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
43, 134
               

               
Conread position:
               
126-333
               

               
Cow position:
               
chr22:766540-766336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
28, 42
               

               
Conread position:
               
126-409
               

               
Cow position:
               
chr22:13286183-13286473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
42, 27
               

               
Conread position:
               
126-409
               

               
Cow position:
               
chr22:31593121-31592834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
27, 42
               

               
Conread position:
               
126-411
               

               
Cow position:
               
chr22:23181294-23181022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
126, 30
               

               
Conread position:
               
126-413
               

               
Cow position:
               
chr22:13670430-13670150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
20, 45
               

               
Conread position:
               
126-419
               

               
Cow position:
               
chr22:25361231-25361516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
211, 40
               

               
Conread position:
               
126-445
               

               
Cow position:
               
chr22:42612198-42612515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
209, 36
               

               
Conread position:
               
126-520
               

               
Cow position:
               
chr22:44717451-44717825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
209, 40
               

               
Conread position:
               
127-407
               

               
Cow position:
               
chr22:7967439-7967724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 39
               

               
Conread position:
               
127-411
               

               
Cow position:
               
chr22:28351915-28351636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
23, 42
               

               
Conread position:
               
127-421
               

               
Cow position:
               
chr22:27223874-27224156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
26, 36
               

               
Conread position:
               
127-425
               

               
Cow position:
               
chr22:1975353-1975647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
24, 41
               

               
Conread position:
               
127-517
               

               
Cow position:
               
chr22:11049032-11049417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
31, 41
               

               
Conread position:
               
128-402
               

               
Cow position:
               
chr22:23115563-23115297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
128-411
               

               
Cow position:
               
chr22:10829168-10828881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
48, 27
               

               
Conread position:
               
128-411
               

               
Cow position:
               
chr22:26658797-26659071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
25, 40
               

               
Conread position:
               
128-421
               

               
Cow position:
               
chr22:12968327-12968040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
151, 38
               

               
Conread position:
               
128-421
               

               
Cow position:
               
chr22:19653239-19652954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
230, 25
               

               
Conread position:
               
129-517
               

               
Cow position:
               
chr22:39696038-39696404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
9, 39
               

               
Conread position:
               
130-353
               

               
Cow position:
               
chr22:21905238-21905457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
191, 34
               

               
Conread position:
               
130-411
               

               
Cow position:
               
chr22:10294794-10295059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
18, 37
               

               
Conread position:
               
130-411
               

               
Cow position:
               
chr22:25222156-25221875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 5
               

               
Conread position:
               
131-397
               

               
Cow position:
               
chr22:37201602-37201855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
19, 36
               

               
Conread position:
               
131-406
               

               
Cow position:
               
chr22:25916787-25917053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
203, 30
               

               
Conread position:
               
131-411
               

               
Cow position:
               
chr22:23854726-23854993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
22, 36
               

               
Conread position:
               
131-415
               

               
Cow position:
               
chr22:32894948-32895244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 33
               

               
Conread position:
               
131-421
               

               
Cow position:
               
chr22:11130616-11130899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
9, 36
               

               
Conread position:
               
131-446
               

               
Cow position:
               
chr22:17295183-17294882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
204, 25
               

               
Conread position:
               
131-516
               

               
Cow position:
               
chr22:26786098-26786461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 36
               

               
Conread position:
               
132-421
               

               
Cow position:
               
chr22:28665015-28665312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
21, 35
               

               
Conread position:
               
132-432
               

               
Cow position:
               
chr22:19738837-19738528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 229
               

               
Conread position:
               
132-434
               

               
Cow position:
               
chr22:44924316-44924012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
186, 33
               

               
Conread position:
               
133-413
               

               
Cow position:
               
chr22:6328018-6327747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
32, 20
               

               
Conread position:
               
136-331
               

               
Cow position:
               
chr22:21526841-21526652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
136-377
               

               
Cow position:
               
chr22:29657449-29657209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
136-411
               

               
Cow position:
               
chr22:3964935-3965206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
15, 31
               

               
Conread position:
               
136-413
               

               
Cow position:
               
chr22:27291851-27292111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
14, 32
               

               
Conread position:
               
137-413
               

               
Cow position:
               
chr22:42684650-42684931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
28, 16
               

               
Conread position:
               
138-362
               

               
Cow position:
               
chr22:10323658-10323874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
138-421
               

               
Cow position:
               
chr22:7851711-7851993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
139-328
               

               
Cow position:
               
chr22:19376463-19376645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
139, 25
               

               
Conread position:
               
139-400
               

               
Cow position:
               
chr22:47582659-47582908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
196, 25
               

               
Conread position:
               
140-319
               

               
Cow position:
               
chr22:29441507-29441327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 156
               

               
Conread position:
               
141-411
               

               
Cow position:
               
chr22:27550111-27550377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
13, 22
               

               
Conread position:
               
141-445
               

               
Cow position:
               
chr22:46665747-46665445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
137, 20
               

               
Conread position:
               
143-466
               

               
Cow position:
               
chr22:22145985-22146315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
78, 10
               

               
Conread position:
               
146-366
               

               
Cow position:
               
chr22:37554867-37554645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
191, 0
               

               
Conread position:
               
146-384
               

               
Cow position:
               
chr22:2010560-2010794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
130, 20
               

               
Conread position:
               
146-448
               

               
Cow position:
               
chr22:36560902-36560604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
132, 187
               

               
Conread position:
               
147-349
               

               
Cow position:
               
chr22:28356797-28356997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
147-401
               

               
Cow position:
               
chr22:25341782-25342026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
131, 19
               

               
Conread position:
               
147-410
               

               
Cow position:
               
chr22:10314835-10315098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
17, 88
               

               
Conread position:
               
147-413
               

               
Cow position:
               
chr22:43812656-43812401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
139, 19
               

               
Conread position:
               
147-421
               

               
Cow position:
               
chr22:5384417-5384684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
183, 19
               

               
Conread position:
               
148-306
               

               
Cow position:
               
chr22:41980319-41980163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
148-401
               

               
Cow position:
               
chr22:27512401-27512145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
124, 30
               

               
Conread position:
               
148-408
               

               
Cow position:
               
chr22:20687056-20687320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
148-409
               

               
Cow position:
               
chr22:7882313-7882573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
187, 18
               

               
Conread position:
               
148-421
               

               
Cow position:
               
chr22:25630008-25629735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
153-357
               

               
Cow position:
               
chr22:6710012-6709813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
182, 83
               

               
Conread position:
               
155-445
               

               
Cow position:
               
chr22:13300177-13300462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
65, 87
               

               
Conread position:
               
156-401
               

               
Cow position:
               
chr22:27825604-27825850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
10, 58
               

               
Conread position:
               
157-328
               

               
Cow position:
               
chr22:5016277-5016450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
157-395
               

               
Cow position:
               
chr22:26166844-26166617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
195, 7
               

               
Conread position:
               
158-411
               

               
Cow position:
               
chr22:5616071-5616322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
40, 6
               

               
Conread position:
               
164-401
               

               
Cow position:
               
chr22:43119952-43119719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
172, 56
               

               
Conread position:
               
164-426
               

               
Cow position:
               
chr22:10585924-10585669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
192, 68
               

               
Conread position:
               
167-370
               

               
Cow position:
               
chr22:12974613-12974408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
168, 190
               

               
Conread position:
               
172-419
               

               
Cow position:
               
chr22:10678200-10677962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
175, 71
               

               
Conread position:
               
174-410
               

               
Cow position:
               
chr22:4974632-4974404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
104, 7
               

               
Conread position:
               
176-340
               

               
Cow position:
               
chr22:10598186-10598348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
157, 49
               

               
Conread position:
               
177-344
               

               
Cow position:
               
chr22:3944964-3945130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
101, 44
               

               
Conread position:
               
179-401
               

               
Cow position:
               
chr22:4372833-4373048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
156, 115
               

               
Conread position:
               
181-409
               

               
Cow position:
               
chr22:5675378-5675162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
183-362
               

               
Cow position:
               
chr22:3269683-3269504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
152, 84
               

               
Conread position:
               
183-411
               

               
Cow position:
               
chr22:11458620-11458842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
153, 95
               

               
Conread position:
               
183-411
               

               
Cow position:
               
chr22:41898653-41898427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
155, 47
               

               
Conread position:
               
184-421
               

               
Cow position:
               
chr22:23689410-23689175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
21, 51
               

               
Conread position:
               
185-340
               

               
Cow position:
               
chr22:27274895-27274741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
79, 45
               

               
Conread position:
               
187-401
               

               
Cow position:
               
chr22:16650403-16650189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
100, 109
               

               
Conread position:
               
188-400
               

               
Cow position:
               
chr22:2523763-2523971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
147, 75
               

               
Conread position:
               
188-409
               

               
Cow position:
               
chr22:10632716-10632934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
176, 139
               

               
Conread position:
               
190-385
               

               
Cow position:
               
chr22:12313222-12313419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
191-402
               

               
Cow position:
               
chr22:12315615-12315822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
87, 47
               

               
Conread position:
               
191-411
               

               
Cow position:
               
chr22:36633035-36633245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
192-369
               

               
Cow position:
               
chr22:7252843-7252663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
192-378
               

               
Cow position:
               
chr22:1289714-1289532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
143, 86
               

               
Conread position:
               
192-420
               

               
Cow position:
               
chr22:1848869-1849102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
83, 40
               

               
Conread position:
               
197-419
               

               
Cow position:
               
chr22:4583365-4583588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
64, 44
               

               
Conread position:
               
199-411
               

               
Cow position:
               
chr22:36433158-36432950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
138, 53
               

               
Conread position:
               
207-411
               

               
Cow position:
               
chr22:8116271-8116068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
57, 75
               

               
Conread position:
               
212-407
               

               
Cow position:
               
chr22:12803564-12803369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
123, 62
               

               
Conread position:
               
213-401
               

               
Cow position:
               
chr22:10567878-10567704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
213-411
               

               
Cow position:
               
chr22:12388913-12389119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
63, 44
               

               
Conread position:
               
213-411
               

               
Cow position:
               
chr22:15753192-15753404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
85, 156
               

               
Conread position:
               
213-421
               

               
Cow position:
               
chr22:9283776-9283569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
122, 54
               

               
Conread position:
               
215-371
               

               
Cow position:
               
chr22:26123503-26123348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
119, 37
               

               
Conread position:
               
216-409
               

               
Cow position:
               
chr22:3367017-3367204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
131, 23
               

               
Conread position:
               
216-409
               

               
Cow position:
               
chr22:32698585-32698782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
216-409
               

               
Cow position:
               
chr22:45796168-45796358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
119, 78
               

               
Conread position:
               
216-411
               

               
Cow position:
               
chr22:32480654-32480460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
119, 99
               

               
Conread position:
               
216-446
               

               
Cow position:
               
chr22:6097198-6096965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
55, 14
               

               
Conread position:
               
217-411
               

               
Cow position:
               
chr22:16822929-16823123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
117, 143
               

               
Conread position:
               
217-413
               

               
Cow position:
               
chr22:12800489-12800691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
219-419
               

               
Cow position:
               
chr22:14638652-14638451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
116, 20
               

               
Conread position:
               
221-412
               

               
Cow position:
               
chr22:2912752-2912565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
58, 107
               

               
Conread position:
               
222-409
               

               
Cow position:
               
chr22:26969613-26969801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
43, 127
               

               
Conread position:
               
222-423
               

               
Cow position:
               
chr22:27729885-27730070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
113, 26
               

               
Conread position:
               
224-521
               

               
Cow position:
               
chr22:10416048-10416337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
103, 118
               

               
Conread position:
               
225-397
               

               
Cow position:
               
chr22:1563416-1563244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
110, 97
               

               
Conread position:
               
225-411
               

               
Cow position:
               
chr22:27835364-27835555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
226-401
               

               
Cow position:
               
chr22:12598922-12599097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
80, 48
               

               
Conread position:
               
226-420
               

               
Cow position:
               
chr22:15025270-15025082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
109, 27
               

               
Conread position:
               
228-409
               

               
Cow position:
               
chr22:19173536-19173714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
132, 105
               

               
Conread position:
               
228-450
               

               
Cow position:
               
chr22:21567832-21568053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 134
               

               
Conread position:
               
235-411
               

               
Cow position:
               
chr22:1874537-1874712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
102, 70
               

               
Conread position:
               
235-421
               

               
Cow position:
               
chr22:45845990-45846172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
100, 109
               

               
Conread position:
               
238-409
               

               
Cow position:
               
chr22:25387172-25387345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
99, 15
               

               
Conread position:
               
239-409
               

               
Cow position:
               
chr22:45807688-45807855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
96, 121
               

               
Conread position:
               
242-401
               

               
Cow position:
               
chr22:3315962-3316114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
246-395
               

               
Cow position:
               
chr22:17224809-17224665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
91, 50
               

               
Conread position:
               
246-411
               

               
Cow position:
               
chr22:40789424-40789586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
89, 73
               

               
Conread position:
               
249-517
               

               
Cow position:
               
chr22:27267398-27267661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
84, 167
               

               
Conread position:
               
250-520
               

               
Cow position:
               
chr22:34631996-34632266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
84, 68
               

               
Conread position:
               
251-401
               

               
Cow position:
               
chr22:21393459-21393308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
85, 110
               

               
Conread position:
               
256-409
               

               
Cow position:
               
chr22:45019970-45019823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
79, 66
               

               
Conread position:
               
257-399
               

               
Cow position:
               
chr22:27066258-27066402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
78, 132
               

               
Conread position:
               
269-411
               

               
Cow position:
               
chr22:12527247-12527100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
68, 111
               

               
Conread position:
               
274-407
               

               
Cow position:
               
chr22:12341078-12341213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
277-421
               

               
Cow position:
               
chr22:10609240-10609387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
58, 140
               

               
Conread position:
               
299-410
               

               
Cow position:
               
chr22:44262995-44263108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
38, 22
               

               
Conread position:
               
361-520
               

               
Cow position:
               
chr22:12446777-12446613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               
Show alignments to all cow chromosomes.