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Cow genome map

           
Conread name:
           
rthg20_o8.y1
        

               
Conread position:
               
22-429
               

               
Cow position:
               
chr25:5837337-5836920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
16, 45
               

               
Conread position:
               
42-396
               

               
Cow position:
               
chr25:15694651-15694987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
106, 64
               

               
Conread position:
               
46-397
               

               
Cow position:
               
chr25:787944-788271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
102, 51
               

               
Conread position:
               
47-305
               

               
Cow position:
               
chr25:21209273-21209029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
59, 51
               

               
Conread position:
               
47-320
               

               
Cow position:
               
chr25:24168256-24167971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
60, 197
               

               
Conread position:
               
47-338
               

               
Cow position:
               
chr25:10011046-10010773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
47-353
               

               
Cow position:
               
chr25:20060355-20060064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
101, 50
               

               
Conread position:
               
47-360
               

               
Cow position:
               
chr25:395030-395326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
105, 50
               

               
Conread position:
               
47-379
               

               
Cow position:
               
chr25:20394880-20395181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
59, 75
               

               
Conread position:
               
47-386
               

               
Cow position:
               
chr25:20403046-20402713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
224, 59
               

               
Conread position:
               
47-395
               

               
Cow position:
               
chr25:14225123-14224798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
39, 60
               

               
Conread position:
               
47-397
               

               
Cow position:
               
chr25:4002447-4002809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
58, 20
               

               
Conread position:
               
47-397
               

               
Cow position:
               
chr25:6464355-6464022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
101, 22
               

               
Conread position:
               
47-401
               

               
Cow position:
               
chr25:4522144-4521826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
315, 59
               

               
Conread position:
               
47-401
               

               
Cow position:
               
chr25:5514682-5515025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 47
               

               
Conread position:
               
47-401
               

               
Cow position:
               
chr25:21193270-21192919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 59
               

               
Conread position:
               
47-401
               

               
Cow position:
               
chr25:22530960-22531294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 59
               

               
Conread position:
               
47-401
               

               
Cow position:
               
chr25:23389599-23389267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
225, 48
               

               
Conread position:
               
47-401
               

               
Cow position:
               
chr25:27531595-27531268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
103, 58
               

               
Conread position:
               
47-401
               

               
Cow position:
               
chr25:35340008-35340341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
59, 50
               

               
Conread position:
               
47-406
               

               
Cow position:
               
chr25:5341324-5341671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
164, 59
               

               
Conread position:
               
47-407
               

               
Cow position:
               
chr25:38972506-38972848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
63, 75
               

               
Conread position:
               
47-409
               

               
Cow position:
               
chr25:11662142-11661799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 55
               

               
Conread position:
               
47-409
               

               
Cow position:
               
chr25:22314874-22315224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
102, 60
               

               
Conread position:
               
47-409
               

               
Cow position:
               
chr25:26654580-26654931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
183, 59
               

               
Conread position:
               
47-409
               

               
Cow position:
               
chr25:35347576-35347923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 12
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr25:2414510-2414836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
291, 50
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr25:3992463-3992807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
106, 61
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr25:6891854-6891514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
119, 60
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr25:8120450-8120804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 59
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr25:9957361-9957017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
106, 57
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr25:11437129-11436786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
101, 59
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr25:14791429-14791778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 50
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr25:14833995-14833643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
61, 22
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr25:18294642-18294293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
33, 71
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr25:24572745-24573089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
119, 59
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr25:30279535-30279187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 77
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr25:33959586-33959231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
59, 21
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr25:34668888-34669265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
58, 134
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr25:36037117-36036758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 61
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr25:36779169-36779522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
224, 59
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr25:41356124-41355770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
204, 58
               

               
Conread position:
               
47-421
               

               
Cow position:
               
chr25:13569494-13569143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
106, 59
               

               
Conread position:
               
47-421
               

               
Cow position:
               
chr25:16922119-16921767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
47-421
               

               
Cow position:
               
chr25:20007794-20008163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
69, 127
               

               
Conread position:
               
47-421
               

               
Cow position:
               
chr25:25827134-25827501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 60
               

               
Conread position:
               
47-421
               

               
Cow position:
               
chr25:38135398-38135780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
48, 129
               

               
Conread position:
               
47-423
               

               
Cow position:
               
chr25:10407745-10407384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
106, 59
               

               
Conread position:
               
47-423
               

               
Cow position:
               
chr25:26238542-26238892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 59
               

               
Conread position:
               
47-424
               

               
Cow position:
               
chr25:6961504-6961120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
77, 59
               

               
Conread position:
               
47-434
               

               
Cow position:
               
chr25:7800809-7801185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 59
               

               
Conread position:
               
47-437
               

               
Cow position:
               
chr25:40957313-40956937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
60, 80
               

               
Conread position:
               
47-455
               

               
Cow position:
               
chr25:21245933-21245544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 59
               

               
Conread position:
               
47-488
               

               
Cow position:
               
chr25:27621755-27622190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
224, 60
               

               
Conread position:
               
47-521
               

               
Cow position:
               
chr25:27593973-27594436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
119, 51
               

               
Conread position:
               
48-289
               

               
Cow position:
               
chr25:11956501-11956729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
223, 59
               

               
Conread position:
               
48-346
               

               
Cow position:
               
chr25:24727112-24726824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
58, 67
               

               
Conread position:
               
48-401
               

               
Cow position:
               
chr25:12824355-12824006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
57, 123
               

               
Conread position:
               
48-411
               

               
Cow position:
               
chr25:6683387-6683041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 59
               

               
Conread position:
               
48-411
               

               
Cow position:
               
chr25:38981781-38982119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
283, 58
               

               
Conread position:
               
48-427
               

               
Cow position:
               
chr25:36392290-36391923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
224, 58
               

               
Conread position:
               
49-239
               

               
Cow position:
               
chr25:10580413-10580228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
57, 78
               

               
Conread position:
               
49-262
               

               
Cow position:
               
chr25:25479957-25479755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
49-333
               

               
Cow position:
               
chr25:12359881-12360154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
223, 58
               

               
Conread position:
               
49-387
               

               
Cow position:
               
chr25:12750488-12750161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
57, 77
               

               
Conread position:
               
49-388
               

               
Cow position:
               
chr25:18155271-18155597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
286, 57
               

               
Conread position:
               
49-394
               

               
Cow position:
               
chr25:6470541-6470210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
57, 77
               

               
Conread position:
               
49-407
               

               
Cow position:
               
chr25:40388781-40388447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 69
               

               
Conread position:
               
49-408
               

               
Cow position:
               
chr25:13840442-13840097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
193, 15
               

               
Conread position:
               
49-411
               

               
Cow position:
               
chr25:5539097-5539443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
97, 57
               

               
Conread position:
               
49-417
               

               
Cow position:
               
chr25:20069399-20069747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 77
               

               
Conread position:
               
49-421
               

               
Cow position:
               
chr25:18564170-18564517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
232, 57
               

               
Conread position:
               
49-423
               

               
Cow position:
               
chr25:3145521-3145874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
57, 78
               

               
Conread position:
               
49-446
               

               
Cow position:
               
chr25:9642019-9642411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 57
               

               
Conread position:
               
50-263
               

               
Cow position:
               
chr25:33687222-33687020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
103, 56
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr25:12204146-12204446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
56, 74
               

               
Conread position:
               
50-409
               

               
Cow position:
               
chr25:30319773-30319429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
56, 74
               

               
Conread position:
               
50-419
               

               
Cow position:
               
chr25:9847462-9847818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
222, 31
               

               
Conread position:
               
50-421
               

               
Cow position:
               
chr25:37594074-37594436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
57, 122
               

               
Conread position:
               
52-411
               

               
Cow position:
               
chr25:12239459-12239126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
246, 55
               

               
Conread position:
               
53-421
               

               
Cow position:
               
chr25:17975688-17975348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
53, 74
               

               
Conread position:
               
54-421
               

               
Cow position:
               
chr25:12097522-12097870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
6, 49
               

               
Conread position:
               
54-423
               

               
Cow position:
               
chr25:26087196-26087550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
99, 11
               

               
Conread position:
               
55-262
               

               
Cow position:
               
chr25:16691185-16691392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 39
               

               
Conread position:
               
55-394
               

               
Cow position:
               
chr25:23351077-23351401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
51, 71
               

               
Conread position:
               
55-411
               

               
Cow position:
               
chr25:25754314-25753975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
276, 51
               

               
Conread position:
               
55-411
               

               
Cow position:
               
chr25:33664215-33663884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
51, 74
               

               
Conread position:
               
55-413
               

               
Cow position:
               
chr25:11830215-11829893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
51, 70
               

               
Conread position:
               
55-421
               

               
Cow position:
               
chr25:11585192-11585548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 71
               

               
Conread position:
               
55-445
               

               
Cow position:
               
chr25:25051703-25051326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 70
               

               
Conread position:
               
56-424
               

               
Cow position:
               
chr25:9023327-9023666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
98, 50
               

               
Conread position:
               
57-333
               

               
Cow position:
               
chr25:35608044-35607779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
55, 64
               

               
Conread position:
               
57-405
               

               
Cow position:
               
chr25:35344709-35345047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 7
               

               
Conread position:
               
61-330
               

               
Cow position:
               
chr25:18968959-18969216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
93, 45
               

               
Conread position:
               
62-417
               

               
Cow position:
               
chr25:12817061-12817402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
211, 43
               

               
Conread position:
               
63-330
               

               
Cow position:
               
chr25:32063519-32063789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
34, 56
               

               
Conread position:
               
64-391
               

               
Cow position:
               
chr25:7216518-7216833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
87, 43
               

               
Conread position:
               
65-384
               

               
Cow position:
               
chr25:8347200-8347506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 59
               

               
Conread position:
               
65-411
               

               
Cow position:
               
chr25:23829423-23829108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
270, 41
               

               
Conread position:
               
65-421
               

               
Cow position:
               
chr25:7641762-7641421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
83, 40
               

               
Conread position:
               
67-513
               

               
Cow position:
               
chr25:40321615-40321190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 104
               

               
Conread position:
               
71-421
               

               
Cow position:
               
chr25:8576388-8576724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
82, 33
               

               
Conread position:
               
74-446
               

               
Cow position:
               
chr25:15319619-15319973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
261, 31
               

               
Conread position:
               
77-388
               

               
Cow position:
               
chr25:29215693-29215389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
221, 13
               

               
Conread position:
               
80-398
               

               
Cow position:
               
chr25:38957668-38957970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
80-401
               

               
Cow position:
               
chr25:6226747-6227046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
26, 44
               

               
Conread position:
               
80-411
               

               
Cow position:
               
chr25:14117815-14118116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
73, 26
               

               
Conread position:
               
85-425
               

               
Cow position:
               
chr25:28188251-28187911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
13, 27
               

               
Conread position:
               
93-387
               

               
Cow position:
               
chr25:15412057-15411771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
179, 13
               

               
Conread position:
               
106-421
               

               
Cow position:
               
chr25:5847084-5846779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
47, 17
               

               
Conread position:
               
110-391
               

               
Cow position:
               
chr25:6886253-6885970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
11, 58
               

               
Conread position:
               
116-394
               

               
Cow position:
               
chr25:10137831-10138098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
219, 10
               

               
Conread position:
               
118-453
               

               
Cow position:
               
chr25:19129586-19129913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 19
               

               
Conread position:
               
119-435
               

               
Cow position:
               
chr25:6003257-6002963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
34, 48
               

               
Conread position:
               
119-517
               

               
Cow position:
               
chr25:36535698-36535318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
159, 34
               

               
Conread position:
               
120-332
               

               
Cow position:
               
chr25:18448572-18448780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
28, 43
               

               
Conread position:
               
120-333
               

               
Cow position:
               
chr25:12195590-12195384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
28, 49
               

               
Conread position:
               
120-333
               

               
Cow position:
               
chr25:20460858-20461071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
28, 16
               

               
Conread position:
               
120-340
               

               
Cow position:
               
chr25:17712269-17712488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
30, 47
               

               
Conread position:
               
120-347
               

               
Cow position:
               
chr25:20348593-20348819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
120-365
               

               
Cow position:
               
chr25:12261159-12260918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
26, 47
               

               
Conread position:
               
120-411
               

               
Cow position:
               
chr25:16866967-16867259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
225, 44
               

               
Conread position:
               
120-419
               

               
Cow position:
               
chr25:22203955-22203659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
24, 47
               

               
Conread position:
               
120-421
               

               
Cow position:
               
chr25:21895148-21894854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
98, 23
               

               
Conread position:
               
120-423
               

               
Cow position:
               
chr25:36081610-36081909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 13
               

               
Conread position:
               
120-424
               

               
Cow position:
               
chr25:1837975-1838270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
33, 47
               

               
Conread position:
               
120-425
               

               
Cow position:
               
chr25:31733001-31732698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
120-455
               

               
Cow position:
               
chr25:5834518-5834187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 48
               

               
Conread position:
               
120-473
               

               
Cow position:
               
chr25:10330659-10330337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
215, 33
               

               
Conread position:
               
120-517
               

               
Cow position:
               
chr25:21024481-21024103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
152, 41
               

               
Conread position:
               
121-311
               

               
Cow position:
               
chr25:33256105-33256290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
157, 42
               

               
Conread position:
               
121-385
               

               
Cow position:
               
chr25:5572062-5571798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
151, 35
               

               
Conread position:
               
121-409
               

               
Cow position:
               
chr25:15714617-15714892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
28, 46
               

               
Conread position:
               
121-418
               

               
Cow position:
               
chr25:34163826-34163529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
121-423
               

               
Cow position:
               
chr25:14512852-14513145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
206, 43
               

               
Conread position:
               
121-429
               

               
Cow position:
               
chr25:8512355-8512057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
144, 30
               

               
Conread position:
               
122-305
               

               
Cow position:
               
chr25:18935138-18934957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
43, 31
               

               
Conread position:
               
122-401
               

               
Cow position:
               
chr25:38850753-38850486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
116, 22
               

               
Conread position:
               
122-411
               

               
Cow position:
               
chr25:12778797-12778517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
44, 177
               

               
Conread position:
               
122-411
               

               
Cow position:
               
chr25:15254594-15254327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
32, 44
               

               
Conread position:
               
122-421
               

               
Cow position:
               
chr25:17566324-17566617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
154, 39
               

               
Conread position:
               
125-275
               

               
Cow position:
               
chr25:13566585-13566732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
125-296
               

               
Cow position:
               
chr25:9842740-9842910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 28
               

               
Conread position:
               
125-319
               

               
Cow position:
               
chr25:21266746-21266939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
27, 42
               

               
Conread position:
               
125-333
               

               
Cow position:
               
chr25:26282764-26282970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
125-360
               

               
Cow position:
               
chr25:10366011-10365779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
26, 8
               

               
Conread position:
               
125-378
               

               
Cow position:
               
chr25:13099740-13099489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
29, 43
               

               
Conread position:
               
125-385
               

               
Cow position:
               
chr25:7386485-7386745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
147, 31
               

               
Conread position:
               
125-410
               

               
Cow position:
               
chr25:11131325-11131604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
220, 28
               

               
Conread position:
               
125-411
               

               
Cow position:
               
chr25:19679082-19679376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 42
               

               
Conread position:
               
125-421
               

               
Cow position:
               
chr25:20076234-20076527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
51, 42
               

               
Conread position:
               
125-425
               

               
Cow position:
               
chr25:27821151-27821446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
147, 36
               

               
Conread position:
               
125-445
               

               
Cow position:
               
chr25:36761846-36762157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
29, 42
               

               
Conread position:
               
125-509
               

               
Cow position:
               
chr25:24452428-24452066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
66, 40
               

               
Conread position:
               
125-518
               

               
Cow position:
               
chr25:14196595-14196964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
24, 42
               

               
Conread position:
               
126-328
               

               
Cow position:
               
chr25:24008437-24008236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
9, 42
               

               
Conread position:
               
126-363
               

               
Cow position:
               
chr25:7306039-7306275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
27, 41
               

               
Conread position:
               
126-397
               

               
Cow position:
               
chr25:8918537-8918269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
28, 41
               

               
Conread position:
               
126-401
               

               
Cow position:
               
chr25:13642575-13642301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
23, 41
               

               
Conread position:
               
126-411
               

               
Cow position:
               
chr25:32191412-32191682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
209, 38
               

               
Conread position:
               
126-445
               

               
Cow position:
               
chr25:9990349-9990058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
22, 40
               

               
Conread position:
               
126-455
               

               
Cow position:
               
chr25:33550247-33550571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 36
               

               
Conread position:
               
126-518
               

               
Cow position:
               
chr25:6474357-6473984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
205, 40
               

               
Conread position:
               
127-401
               

               
Cow position:
               
chr25:16001779-16001514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
127-411
               

               
Cow position:
               
chr25:4547978-4547697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
24, 40
               

               
Conread position:
               
130-423
               

               
Cow position:
               
chr25:2194692-2194965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
205, 23
               

               
Conread position:
               
130-437
               

               
Cow position:
               
chr25:13380870-13380565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
142, 36
               

               
Conread position:
               
131-411
               

               
Cow position:
               
chr25:20785835-20785565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 22
               

               
Conread position:
               
131-435
               

               
Cow position:
               
chr25:448599-448298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
141, 30
               

               
Conread position:
               
132-344
               

               
Cow position:
               
chr25:14467335-14467124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
147, 12
               

               
Conread position:
               
132-366
               

               
Cow position:
               
chr25:6814998-6815219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
132-409
               

               
Cow position:
               
chr25:5792059-5791781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
139, 34
               

               
Conread position:
               
132-411
               

               
Cow position:
               
chr25:16319385-16319119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
24, 35
               

               
Conread position:
               
133-390
               

               
Cow position:
               
chr25:24669682-24669438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
202, 33
               

               
Conread position:
               
133-411
               

               
Cow position:
               
chr25:20023649-20023365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
133-411
               

               
Cow position:
               
chr25:33457454-33457753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
94, 20
               

               
Conread position:
               
136-411
               

               
Cow position:
               
chr25:36746694-36746427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
199, 30
               

               
Conread position:
               
136-445
               

               
Cow position:
               
chr25:20211335-20211023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 31
               

               
Conread position:
               
138-372
               

               
Cow position:
               
chr25:15286791-15286558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
6, 98
               

               
Conread position:
               
141-410
               

               
Cow position:
               
chr25:2136108-2136379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
114, 25
               

               
Conread position:
               
146-365
               

               
Cow position:
               
chr25:36026769-36026985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
131, 19
               

               
Conread position:
               
146-411
               

               
Cow position:
               
chr25:21289102-21289367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
125, 20
               

               
Conread position:
               
146-520
               

               
Cow position:
               
chr25:26338207-26338563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
94, 20
               

               
Conread position:
               
147-386
               

               
Cow position:
               
chr25:22369156-22369387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
117, 15
               

               
Conread position:
               
147-394
               

               
Cow position:
               
chr25:7329307-7329553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
188, 16
               

               
Conread position:
               
147-401
               

               
Cow position:
               
chr25:15377096-15377338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
198, 19
               

               
Conread position:
               
147-411
               

               
Cow position:
               
chr25:8560632-8560890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
151, 15
               

               
Conread position:
               
147-411
               

               
Cow position:
               
chr25:38425126-38425382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
188, 85
               

               
Conread position:
               
147-457
               

               
Cow position:
               
chr25:1735553-1735255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
148-328
               

               
Cow position:
               
chr25:23324601-23324421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
124, 13
               

               
Conread position:
               
148-411
               

               
Cow position:
               
chr25:61421-61671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
126, 18
               

               
Conread position:
               
150-345
               

               
Cow position:
               
chr25:6256172-6255980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
130, 16
               

               
Conread position:
               
158-421
               

               
Cow position:
               
chr25:19478461-19478705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
200, 6
               

               
Conread position:
               
161-421
               

               
Cow position:
               
chr25:10218277-10218019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
7, 47
               

               
Conread position:
               
164-417
               

               
Cow position:
               
chr25:36033214-36033465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
171, 81
               

               
Conread position:
               
166-384
               

               
Cow position:
               
chr25:12899535-12899753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
169, 16
               

               
Conread position:
               
167-432
               

               
Cow position:
               
chr25:34169735-34169987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
168, 60
               

               
Conread position:
               
168-371
               

               
Cow position:
               
chr25:11978917-11978722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
169, 34
               

               
Conread position:
               
176-411
               

               
Cow position:
               
chr25:36017326-36017563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
38, 15
               

               
Conread position:
               
179-376
               

               
Cow position:
               
chr25:29826204-29826406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
183-378
               

               
Cow position:
               
chr25:2624602-2624798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
111, 121
               

               
Conread position:
               
184-400
               

               
Cow position:
               
chr25:7750248-7750462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
55, 116
               

               
Conread position:
               
184-411
               

               
Cow position:
               
chr25:13272367-13272590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
151, 103
               

               
Conread position:
               
184-411
               

               
Cow position:
               
chr25:22178719-22178938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
151, 29
               

               
Conread position:
               
184-411
               

               
Cow position:
               
chr25:26270136-26269916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
93, 42
               

               
Conread position:
               
184-424
               

               
Cow position:
               
chr25:16714476-16714236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
61, 149
               

               
Conread position:
               
185-411
               

               
Cow position:
               
chr25:27801089-27801303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
150, 26
               

               
Conread position:
               
185-419
               

               
Cow position:
               
chr25:8157711-8157474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
140, 70
               

               
Conread position:
               
187-411
               

               
Cow position:
               
chr25:17342250-17342479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
66, 70
               

               
Conread position:
               
188-450
               

               
Cow position:
               
chr25:26090012-26089756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
147, 44
               

               
Conread position:
               
190-421
               

               
Cow position:
               
chr25:20133511-20133284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
144, 31
               

               
Conread position:
               
190-445
               

               
Cow position:
               
chr25:25861556-25861298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
145, 90
               

               
Conread position:
               
191-429
               

               
Cow position:
               
chr25:12755686-12755449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
87, 18
               

               
Conread position:
               
193-345
               

               
Cow position:
               
chr25:35110323-35110169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
193-379
               

               
Cow position:
               
chr25:32453591-32453414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
142, 125
               

               
Conread position:
               
193-397
               

               
Cow position:
               
chr25:3982851-3983047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
142, 62
               

               
Conread position:
               
193-411
               

               
Cow position:
               
chr25:13672195-13672416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
193-411
               

               
Cow position:
               
chr25:14720559-14720765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
143, 40
               

               
Conread position:
               
194-401
               

               
Cow position:
               
chr25:21668050-21668260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
6, 43
               

               
Conread position:
               
197-411
               

               
Cow position:
               
chr25:18905692-18905906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
75, 151
               

               
Conread position:
               
199-411
               

               
Cow position:
               
chr25:4681046-4681252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
135, 99
               

               
Conread position:
               
201-421
               

               
Cow position:
               
chr25:26259680-26259457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
71, 216
               

               
Conread position:
               
206-411
               

               
Cow position:
               
chr25:17190924-17190723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
118, 78
               

               
Conread position:
               
206-411
               

               
Cow position:
               
chr25:18894903-18894698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
130, 124
               

               
Conread position:
               
207-410
               

               
Cow position:
               
chr25:12319526-12319323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
20, 39
               

               
Conread position:
               
210-415
               

               
Cow position:
               
chr25:11315730-11315929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 72
               

               
Conread position:
               
211-411
               

               
Cow position:
               
chr25:17144248-17144450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
123, 32
               

               
Conread position:
               
212-387
               

               
Cow position:
               
chr25:33267545-33267723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
66, 83
               

               
Conread position:
               
213-398
               

               
Cow position:
               
chr25:32277777-32277586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
7, 151
               

               
Conread position:
               
213-399
               

               
Cow position:
               
chr25:13472067-13471889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
133, 78
               

               
Conread position:
               
216-419
               

               
Cow position:
               
chr25:12081496-12081292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
30, 17
               

               
Conread position:
               
216-495
               

               
Cow position:
               
chr25:21042208-21042485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
8, 60
               

               
Conread position:
               
217-409
               

               
Cow position:
               
chr25:23245182-23244983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
68, 149
               

               
Conread position:
               
225-411
               

               
Cow position:
               
chr25:21893173-21893359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
226-411
               

               
Cow position:
               
chr25:41151124-41150945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
111, 84
               

               
Conread position:
               
227-411
               

               
Cow position:
               
chr25:26679065-26679247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
108, 123
               

               
Conread position:
               
230-426
               

               
Cow position:
               
chr25:11054746-11054939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
107, 13
               

               
Conread position:
               
230-521
               

               
Cow position:
               
chr25:30852597-30852873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
232-409
               

               
Cow position:
               
chr25:14157464-14157644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
26, 18
               

               
Conread position:
               
232-425
               

               
Cow position:
               
chr25:35333000-35333192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
46, 127
               

               
Conread position:
               
232-518
               

               
Cow position:
               
chr25:31732492-31732218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
103, 26
               

               
Conread position:
               
245-409
               

               
Cow position:
               
chr25:12609200-12609362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
90, 70
               

               
Conread position:
               
245-520
               

               
Cow position:
               
chr25:7673135-7673406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
57, 100
               

               
Conread position:
               
249-407
               

               
Cow position:
               
chr25:12997451-12997612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
249-411
               

               
Cow position:
               
chr25:34979008-34978841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
86, 66
               

               
Conread position:
               
256-411
               

               
Cow position:
               
chr25:12510143-12509990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
81, 49
               

               
Conread position:
               
257-402
               

               
Cow position:
               
chr25:11051397-11051543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
78, 34
               

               
Conread position:
               
257-409
               

               
Cow position:
               
chr25:9843043-9843195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
79, 65
               

               
Conread position:
               
257-411
               

               
Cow position:
               
chr25:7449675-7449821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
80, 30
               

               
Conread position:
               
266-408
               

               
Cow position:
               
chr25:26642459-26642604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
267-512
               

               
Cow position:
               
chr25:13640261-13640525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 81
               

               
Conread position:
               
269-421
               

               
Cow position:
               
chr25:33557153-33557305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
66, 106
               

               
Conread position:
               
270-411
               

               
Cow position:
               
chr25:19364179-19364038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
67, 12
               

               
Conread position:
               
271-408
               

               
Cow position:
               
chr25:11433072-11432927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
306-411
               

               
Cow position:
               
chr25:7440942-7441050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               
Show alignments to all cow chromosomes.