Cow genome map

Conread name: rthg20_o8.y1

Conread position: 28-407
Cow position: chr6:60350622-60350233 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 147

Conread position: 30-420
Cow position: chr6:57164123-57164500 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 266
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 12, 73

Conread position: 32-270
Cow position: chr6:41265260-41265491 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 164
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 13

Conread position: 34-518
Cow position: chr6:6264349-6264798 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 319
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 52, 11

Conread position: 35-379
Cow position: chr6:66566161-66566490 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 226
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 71, 10

Conread position: 40-352
Cow position: chr6:69500038-69500329 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 214
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 69, 86

Conread position: 42-413
Cow position: chr6:38218374-38218733 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 46

Conread position: 44-416
Cow position: chr6:5672942-5673315 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 255
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 109, 18

Conread position: 44-421
Cow position: chr6:47305040-47305413 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 123

Conread position: 45-388
Cow position: chr6:58075941-58076270 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 242
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 61, 52

Conread position: 46-402
Cow position: chr6:8636989-8637332 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 58

Conread position: 46-419
Cow position: chr6:10106286-10105907 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 49

Conread position: 47-262
Cow position: chr6:60516443-60516649 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 99, 59

Conread position: 47-269
Cow position: chr6:6117841-6117629 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 102, 72

Conread position: 47-271
Cow position: chr6:6471057-6470848 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 47-273
Cow position: chr6:16492199-16491993 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 106, 28

Conread position: 47-276
Cow position: chr6:12116336-12116122 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 171, 35

Conread position: 47-285
Cow position: chr6:7253723-7253485 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 158
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 61, 107

Conread position: 47-311
Cow position: chr6:8209870-8209628 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 104, 50

Conread position: 47-323
Cow position: chr6:46666821-46667087 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 198
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 52, 58

Conread position: 47-335
Cow position: chr6:50120070-50119799 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 199
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 99, 50

Conread position: 47-338
Cow position: chr6:41824113-41823830 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 208
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 59, 79

Conread position: 47-340
Cow position: chr6:21587706-21587424 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 214
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 59, 77

Conread position: 47-347
Cow position: chr6:32210914-32210628 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 60

Conread position: 47-347
Cow position: chr6:61575319-61575609 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 200
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 206, 59

Conread position: 47-349
Cow position: chr6:2012734-2013021 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 223
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 101, 59

Conread position: 47-352
Cow position: chr6:46570836-46571122 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 215
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 290, 34

Conread position: 47-353
Cow position: chr6:2607329-2607621 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 222
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 60, 47

Conread position: 47-353
Cow position: chr6:10332391-10332084 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 60

Conread position: 47-356
Cow position: chr6:54806938-54807237 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 212
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 105, 58

Conread position: 47-360
Cow position: chr6:619263-619570 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 207
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 102, 59

Conread position: 47-361
Cow position: chr6:12500572-12500873 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 227
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 106, 59

Conread position: 47-363
Cow position: chr6:18447793-18447496 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 224
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 257, 58

Conread position: 47-366
Cow position: chr6:27870475-27870797 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 221
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 59, 82

Conread position: 47-378
Cow position: chr6:9375656-9375345 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 231
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 101, 20

Conread position: 47-378
Cow position: chr6:26696892-26696573 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 222
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 203, 59

Conread position: 47-379
Cow position: chr6:47625244-47624927 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 228
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 248, 60

Conread position: 47-387
Cow position: chr6:8562431-8562761 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 239
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 59, 79

Conread position: 47-388
Cow position: chr6:4864823-4864507 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 243
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 287, 59

Conread position: 47-388
Cow position: chr6:14839311-14838985 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 231
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 232, 59

Conread position: 47-391
Cow position: chr6:31525767-31526095 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 244
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 288, 50

Conread position: 47-393
Cow position: chr6:20231110-20230781 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 239
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 106, 59

Conread position: 47-395
Cow position: chr6:39358623-39358298 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 249
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 251, 18

Conread position: 47-401
Cow position: chr6:6614150-6614490 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 234
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 174, 59

Conread position: 47-401
Cow position: chr6:17414738-17414394 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 59

Conread position: 47-401
Cow position: chr6:23695713-23696053 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 78

Conread position: 47-402
Cow position: chr6:12629729-12630075 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 235
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 61

Conread position: 47-402
Cow position: chr6:47540241-47540585 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 57

Conread position: 47-402
Cow position: chr6:60931188-60930844 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 249
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 25, 52

Conread position: 47-409
Cow position: chr6:5609743-5609384 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 59

Conread position: 47-409
Cow position: chr6:6060842-6060511 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 251
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 102, 59

Conread position: 47-409
Cow position: chr6:12550983-12551331 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 61

Conread position: 47-409
Cow position: chr6:15305304-15305632 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 263
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 59, 50

Conread position: 47-409
Cow position: chr6:16410911-16411252 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 257
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 231, 57

Conread position: 47-409
Cow position: chr6:46465543-46465882 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 74

Conread position: 47-409
Cow position: chr6:61631898-61631548 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 247
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 224, 50

Conread position: 47-409
Cow position: chr6:66532087-66531760 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 245
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 316, 37

Conread position: 47-410
Cow position: chr6:606977-607325 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 245
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 103, 59

Conread position: 47-410
Cow position: chr6:52478727-52478349 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 121

Conread position: 47-411
Cow position: chr6:456895-457242 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 251
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 19, 80

Conread position: 47-411
Cow position: chr6:1770480-1770135 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 257
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 59, 80

Conread position: 47-411
Cow position: chr6:8804828-8804466 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 257
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 58, 24

Conread position: 47-411
Cow position: chr6:9008892-9008549 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 249
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 106, 60

Conread position: 47-411
Cow position: chr6:11192737-11192401 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 262
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 106, 59

Conread position: 47-411
Cow position: chr6:13688096-13687749 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 263
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 59, 78

Conread position: 47-411
Cow position: chr6:14958628-14958278 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 256
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 104, 30

Conread position: 47-411
Cow position: chr6:16699977-16700324 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 256
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 59, 50

Conread position: 47-411
Cow position: chr6:18987932-18988275 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 244
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 58, 0

Conread position: 47-411
Cow position: chr6:24031090-24031442 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 59

Conread position: 47-411
Cow position: chr6:32121626-32121970 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 59

Conread position: 47-411
Cow position: chr6:32867491-32867156 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 256
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 103, 58

Conread position: 47-411
Cow position: chr6:34075742-34076092 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 254
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 59, 50

Conread position: 47-411
Cow position: chr6:45690894-45690547 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 121

Conread position: 47-411
Cow position: chr6:49398902-49398557 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 59

Conread position: 47-411
Cow position: chr6:50983898-50984285 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 270
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 51, 223

Conread position: 47-413
Cow position: chr6:10695574-10695928 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 246
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 106, 44

Conread position: 47-415
Cow position: chr6:9322855-9323216 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 128

Conread position: 47-415
Cow position: chr6:35613712-35613355 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 116

Conread position: 47-416
Cow position: chr6:51674625-51674977 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 262
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 59, 68

Conread position: 47-419
Cow position: chr6:38771013-38771356 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 255
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 59, 29

Conread position: 47-419
Cow position: chr6:58073758-58074120 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 60

Conread position: 47-421
Cow position: chr6:323595-323233 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 256
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 107, 61

Conread position: 47-421
Cow position: chr6:5095839-5095470 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 266
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 59, 68

Conread position: 47-421
Cow position: chr6:6343143-6343498 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 24

Conread position: 47-421
Cow position: chr6:12337700-12338065 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 269
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 224, 59

Conread position: 47-421
Cow position: chr6:15938149-15937783 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 60

Conread position: 47-421
Cow position: chr6:36470850-36470490 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 268
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 94, 50

Conread position: 47-421
Cow position: chr6:42565401-42565760 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 60

Conread position: 47-421
Cow position: chr6:47339641-47339284 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 250
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 120, 69

Conread position: 47-421
Cow position: chr6:47519766-47520125 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 59

Conread position: 47-421
Cow position: chr6:54867227-54867589 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 260
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 59, 48

Conread position: 47-421
Cow position: chr6:67968916-67968538 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 262
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 21, 51

Conread position: 47-423
Cow position: chr6:35990513-35990162 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 259
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 287, 40

Conread position: 47-423
Cow position: chr6:51835116-51835471 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 257
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 59, 18

Conread position: 47-423
Cow position: chr6:62925277-62924924 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 263
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 284, 9

Conread position: 47-424
Cow position: chr6:54369181-54368829 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 269
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 230, 50

Conread position: 47-428
Cow position: chr6:28147966-28148333 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 253
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 201, 49

Conread position: 47-430
Cow position: chr6:12623186-12623539 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 272
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 59, 78

Conread position: 47-438
Cow position: chr6:32125782-32126148 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 272
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 101, 61

Conread position: 47-446
Cow position: chr6:11169423-11169796 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 271
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 156, 59

Conread position: 47-446
Cow position: chr6:46860483-46860072 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 139

Conread position: 47-446
Cow position: chr6:65870739-65871132 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 59

Conread position: 47-478
Cow position: chr6:3978946-3978539 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 301
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 171, 59

Conread position: 47-518
Cow position: chr6:642862-642388 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 58

Conread position: 47-520
Cow position: chr6:37634505-37634942 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 59

Conread position: 47-520
Cow position: chr6:67214457-67214896 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 321
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 231, 59

Conread position: 48-363
Cow position: chr6:30826336-30826017 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 221
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 58, 102

Conread position: 48-424
Cow position: chr6:64431658-64432012 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 267
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 58, 49

Conread position: 48-495
Cow position: chr6:56842876-56843310 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 56

Conread position: 49-284
Cow position: chr6:60467745-60467960 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 75

Conread position: 49-311
Cow position: chr6:54140535-54140773 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 223, 48

Conread position: 49-333
Cow position: chr6:875608-875334 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 120, 57

Conread position: 49-333
Cow position: chr6:56441213-56440940 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 191
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 233, 57

Conread position: 49-353
Cow position: chr6:19401558-19401862 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 212
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 58, 35

Conread position: 49-378
Cow position: chr6:29210219-29210527 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 241
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 57, 79

Conread position: 49-395
Cow position: chr6:67544575-67544249 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 236
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 105, 56

Conread position: 49-397
Cow position: chr6:21312038-21311709 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 250
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 97, 48

Conread position: 49-399
Cow position: chr6:53345513-53345841 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 248
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 57, 78

Conread position: 49-401
Cow position: chr6:5958298-5957975 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 253
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 286, 16

Conread position: 49-406
Cow position: chr6:57384221-57384581 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 228
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 43, 119

Conread position: 49-408
Cow position: chr6:68340082-68339736 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 232
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 99, 57

Conread position: 49-409
Cow position: chr6:50446042-50445705 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 247
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 205, 57

Conread position: 49-410
Cow position: chr6:25376125-25376475 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 230
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 119, 57

Conread position: 49-411
Cow position: chr6:10176581-10176239 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 252
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 229, 48

Conread position: 49-411
Cow position: chr6:43188610-43188959 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 235
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 195, 57

Conread position: 49-411
Cow position: chr6:55040500-55040151 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 239
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 102, 57

Conread position: 49-421
Cow position: chr6:18049308-18048952 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 258
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 222, 51

Conread position: 49-427
Cow position: chr6:42518687-42519061 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 255
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 109, 35

Conread position: 49-450
Cow position: chr6:27851987-27851606 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 264
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 232, 57

Conread position: 49-455
Cow position: chr6:52431315-52430920 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 277
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 57, 77

Conread position: 49-517
Cow position: chr6:12927840-12928285 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 305
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 58, 28

Conread position: 49-518
Cow position: chr6:21004373-21004821 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 315
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 173, 55

Conread position: 49-521
Cow position: chr6:7131154-7130732 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 328
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 104, 49

Conread position: 50-272
Cow position: chr6:20951677-20951885 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 50-331
Cow position: chr6:55903951-55904221 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 187
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 220, 56

Conread position: 50-333
Cow position: chr6:2185634-2185363 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 189
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 224, 55

Conread position: 50-333
Cow position: chr6:9026215-9026503 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 17, 123

Conread position: 50-411
Cow position: chr6:44098806-44099150 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 245
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 214, 49

Conread position: 50-421
Cow position: chr6:58747929-58748290 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 246
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 222, 18

Conread position: 52-521
Cow position: chr6:2546963-2547403 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 75

Conread position: 53-288
Cow position: chr6:25784034-25784252 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 53-326
Cow position: chr6:10605405-10605666 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 91, 45

Conread position: 53-333
Cow position: chr6:65910196-65910459 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 187
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 95, 53

Conread position: 53-344
Cow position: chr6:42693084-42693375 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 202
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 185, 53

Conread position: 53-386
Cow position: chr6:53178361-53178675 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 235
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 218, 53

Conread position: 53-407
Cow position: chr6:40031915-40032250 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 53

Conread position: 53-411
Cow position: chr6:23117678-23117332 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 233
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 53, 73

Conread position: 53-411
Cow position: chr6:33302132-33302466 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 246
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 53, 20

Conread position: 53-433
Cow position: chr6:19427171-19427538 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 249
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 245, 48

Conread position: 53-437
Cow position: chr6:28476899-28477257 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 261
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 100, 52

Conread position: 53-445
Cow position: chr6:28482736-28483110 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 266
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 100, 53

Conread position: 54-319
Cow position: chr6:19508709-19508469 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 186
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 54-401
Cow position: chr6:16737743-16738072 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 238
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 280, 51

Conread position: 54-401
Cow position: chr6:23987014-23986692 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 231
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 283, 52

Conread position: 54-427
Cow position: chr6:6181854-6181496 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 243
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 218, 52

Conread position: 54-436
Cow position: chr6:14696652-14696287 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 262
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 15, 54

Conread position: 55-317
Cow position: chr6:34235711-34235467 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 97, 46

Conread position: 55-420
Cow position: chr6:10253942-10254313 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 252
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 122

Conread position: 55-427
Cow position: chr6:26413105-26413453 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 236
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 55-431
Cow position: chr6:46391419-46391776 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 243
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 217, 42

Conread position: 55-445
Cow position: chr6:32287343-32287733 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 288
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 88, 51

Conread position: 55-518
Cow position: chr6:63047299-63047737 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 300
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 95, 51

Conread position: 56-291
Cow position: chr6:18977339-18977570 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 160
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 60, 41

Conread position: 56-421
Cow position: chr6:9751321-9750982 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 241
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 65, 51

Conread position: 57-518
Cow position: chr6:47150504-47150964 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 71

Conread position: 59-371
Cow position: chr6:50746704-50747008 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 229
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 89, 47

Conread position: 59-385
Cow position: chr6:60473861-60474167 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 221
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 87, 46

Conread position: 59-411
Cow position: chr6:54365596-54365265 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 249
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 47, 67

Conread position: 63-341
Cow position: chr6:35471795-35471525 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 210
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 43, 64

Conread position: 64-346
Cow position: chr6:39994745-39994462 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 201
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 33, 108

Conread position: 65-394
Cow position: chr6:57504497-57504810 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 220
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 41, 30

Conread position: 65-409
Cow position: chr6:52248404-52248071 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 240
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 257, 37

Conread position: 65-423
Cow position: chr6:49410951-49410621 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 248
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 348, 41

Conread position: 67-411
Cow position: chr6:40713763-40713440 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 238
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 40, 14

Conread position: 70-409
Cow position: chr6:49422044-49421728 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 220
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 264, 42

Conread position: 77-420
Cow position: chr6:65903887-65903553 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 227
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 62

Conread position: 78-413
Cow position: chr6:53460836-53460502 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 88

Conread position: 85-333
Cow position: chr6:52401605-52401845 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 172
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 20

Conread position: 85-410
Cow position: chr6:16103461-16103134 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 224
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 12, 83

Conread position: 86-411
Cow position: chr6:67950701-67951018 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 235
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 11, 82

Conread position: 87-411
Cow position: chr6:60239645-60239332 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 219
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 30, 22

Conread position: 88-387
Cow position: chr6:20157068-20157372 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 215
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 8, 14

Conread position: 90-401
Cow position: chr6:16746088-16746396 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 217
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 59, 17

Conread position: 90-402
Cow position: chr6:17090347-17090654 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 220
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 245, 16

Conread position: 90-409
Cow position: chr6:130416-130100 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 18

Conread position: 96-402
Cow position: chr6:63299269-63298977 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 205
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 239, 21

Conread position: 96-446
Cow position: chr6:28977277-28976945 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 246
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 69, 8

Conread position: 99-349
Cow position: chr6:21110725-21110967 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 175
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 67, 54

Conread position: 105-411
Cow position: chr6:66874124-66874414 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 213
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 48, 62

Conread position: 105-518
Cow position: chr6:59302060-59301643 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 257
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 48, 11

Conread position: 106-311
Cow position: chr6:52562411-52562204 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 145, 55

Conread position: 106-329
Cow position: chr6:55366561-55366335 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 7, 0

Conread position: 106-394
Cow position: chr6:49002962-49002686 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 194
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 16, 61

Conread position: 106-401
Cow position: chr6:25773617-25773332 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 210
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 44, 15

Conread position: 106-427
Cow position: chr6:32420900-32421219 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 206
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 166, 19

Conread position: 107-423
Cow position: chr6:14949717-14949409 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 222
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 46, 60

Conread position: 107-427
Cow position: chr6:68049200-68049511 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 229
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 14, 7

Conread position: 108-438
Cow position: chr6:56376583-56376258 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 225
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 27

Conread position: 110-340
Cow position: chr6:48573115-48572890 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 108, 53

Conread position: 111-411
Cow position: chr6:46865831-46865529 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 210
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 49, 99

Conread position: 112-513
Cow position: chr6:20605702-20606100 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 271
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 9, 55

Conread position: 114-435
Cow position: chr6:5445400-5445713 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 236
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 36, 53

Conread position: 116-411
Cow position: chr6:55282517-55282231 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 8, 51

Conread position: 118-393
Cow position: chr6:56849793-56850062 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 197
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 35, 49

Conread position: 119-409
Cow position: chr6:23248187-23247901 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 45

Conread position: 119-411
Cow position: chr6:63719977-63720263 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 216
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 216, 18

Conread position: 119-421
Cow position: chr6:47026257-47026549 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 208
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 9, 44

Conread position: 120-276
Cow position: chr6:55743158-55743313 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 120-305
Cow position: chr6:3719231-3719046 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 172

Conread position: 120-310
Cow position: chr6:28559192-28559386 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 154, 46

Conread position: 120-319
Cow position: chr6:55608029-55607841 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 47

Conread position: 120-328
Cow position: chr6:60859529-60859318 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 151, 44

Conread position: 120-333
Cow position: chr6:388948-389155 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 47

Conread position: 120-333
Cow position: chr6:2582652-2582856 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 120-334
Cow position: chr6:1783995-1783791 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 33, 47

Conread position: 120-347
Cow position: chr6:7103458-7103229 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 28, 15

Conread position: 120-347
Cow position: chr6:14201475-14201701 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 47

Conread position: 120-367
Cow position: chr6:34475766-34475534 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 151, 33

Conread position: 120-371
Cow position: chr6:16593854-16594106 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 166
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 152, 49

Conread position: 120-386
Cow position: chr6:64449169-64449428 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 154, 60

Conread position: 120-387
Cow position: chr6:58606059-58606324 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 184
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 152, 86

Conread position: 120-394
Cow position: chr6:45160514-45160252 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 215, 47

Conread position: 120-394
Cow position: chr6:53710895-53711161 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 215, 40

Conread position: 120-394
Cow position: chr6:54132595-54132861 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 206
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 28, 47

Conread position: 120-400
Cow position: chr6:58172962-58173237 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 33, 47

Conread position: 120-401
Cow position: chr6:24468615-24468343 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 203
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 160, 65

Conread position: 120-401
Cow position: chr6:54885136-54884852 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 29, 48

Conread position: 120-402
Cow position: chr6:49685362-49685639 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 31, 47

Conread position: 120-411
Cow position: chr6:5302627-5302356 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 200
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 26, 44

Conread position: 120-411
Cow position: chr6:18961745-18961452 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 46

Conread position: 120-411
Cow position: chr6:20098187-20097896 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 215
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 31, 44

Conread position: 120-411
Cow position: chr6:21542097-21542386 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 47

Conread position: 120-411
Cow position: chr6:63286733-63286442 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 189
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 152, 41

Conread position: 120-421
Cow position: chr6:3929098-3929391 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 196
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 214, 46

Conread position: 120-421
Cow position: chr6:56349948-56350246 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 191
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 152, 49

Conread position: 120-421
Cow position: chr6:58031897-58032193 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 191
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 152, 49

Conread position: 120-423
Cow position: chr6:53933063-53932774 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 209
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 158, 33

Conread position: 120-445
Cow position: chr6:13040229-13040534 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 223
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 245, 178

Conread position: 120-445
Cow position: chr6:31535793-31535475 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 46

Conread position: 120-518
Cow position: chr6:15242613-15242981 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 283
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 26, 17

Conread position: 121-377
Cow position: chr6:61515419-61515160 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 183
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 134, 46

Conread position: 121-402
Cow position: chr6:9736861-9736602 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 32

Conread position: 121-402
Cow position: chr6:38853880-38853605 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 208
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 31, 47

Conread position: 121-409
Cow position: chr6:4383271-4383540 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 45

Conread position: 121-410
Cow position: chr6:29239721-29240003 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 196
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 48, 32

Conread position: 121-411
Cow position: chr6:34196370-34196087 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 200
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 23, 47

Conread position: 121-421
Cow position: chr6:38207717-38207418 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 45

Conread position: 122-319
Cow position: chr6:59015783-59015587 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 46

Conread position: 122-387
Cow position: chr6:36928431-36928700 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 186
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 84, 44

Conread position: 122-401
Cow position: chr6:51581480-51581199 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 46

Conread position: 122-411
Cow position: chr6:7190340-7190056 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 31, 45

Conread position: 122-415
Cow position: chr6:21737105-21736818 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 9, 44

Conread position: 122-421
Cow position: chr6:6943901-6943607 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 201
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 89, 30

Conread position: 122-445
Cow position: chr6:51893734-51893406 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 215
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 235

Conread position: 123-518
Cow position: chr6:6098501-6098121 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 274
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 25, 12

Conread position: 125-313
Cow position: chr6:5462266-5462087 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 146, 41

Conread position: 125-313
Cow position: chr6:20329803-20329991 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 23, 40

Conread position: 125-333
Cow position: chr6:1538578-1538785 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 139
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 146, 42

Conread position: 125-362
Cow position: chr6:15923215-15922983 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 179
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 210, 35

Conread position: 125-401
Cow position: chr6:36202610-36202874 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 204
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 28, 43

Conread position: 125-401
Cow position: chr6:54430601-54430881 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 197
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 23, 43

Conread position: 125-401
Cow position: chr6:67304584-67304858 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 187
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 207, 38

Conread position: 125-402
Cow position: chr6:26915112-26915385 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 203
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 28, 43

Conread position: 125-408
Cow position: chr6:34031450-34031721 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 203
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 28, 42

Conread position: 125-411
Cow position: chr6:38614606-38614882 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 211
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 28, 42

Conread position: 125-421
Cow position: chr6:45065224-45064945 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 204
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 39

Conread position: 125-421
Cow position: chr6:54490958-54490661 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 211
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 29, 42

Conread position: 125-445
Cow position: chr6:44194763-44194455 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 43

Conread position: 125-446
Cow position: chr6:35415739-35415420 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 219
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 72, 37

Conread position: 125-496
Cow position: chr6:61113532-61113890 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 254
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 23, 42

Conread position: 126-394
Cow position: chr6:48344111-48344379 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 190
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 209, 35

Conread position: 126-411
Cow position: chr6:37199766-37199464 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 216
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 36, 251

Conread position: 126-411
Cow position: chr6:60442202-60442477 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 203
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 127, 40

Conread position: 126-415
Cow position: chr6:6460325-6460609 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 208
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 208, 27

Conread position: 126-421
Cow position: chr6:611344-611622 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 201
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 28, 38

Conread position: 126-421
Cow position: chr6:50090423-50090714 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 188
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 145, 195

Conread position: 126-424
Cow position: chr6:38440965-38441249 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 202
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 41

Conread position: 126-445
Cow position: chr6:8965873-8966191 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 231
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 209, 40

Conread position: 127-401
Cow position: chr6:53651824-53652093 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 202
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 208, 104

Conread position: 127-411
Cow position: chr6:899500-899230 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 211
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 21, 40

Conread position: 127-455
Cow position: chr6:29484878-29485185 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 218
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 208, 8

Conread position: 128-345
Cow position: chr6:66453586-66453797 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 24, 39

Conread position: 128-361
Cow position: chr6:30786363-30786141 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 36

Conread position: 128-378
Cow position: chr6:61130697-61130447 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 173
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 150, 33

Conread position: 128-419
Cow position: chr6:17997530-17997248 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 200
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 23, 40

Conread position: 130-425
Cow position: chr6:54701327-54701613 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 201
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 13, 38

Conread position: 131-353
Cow position: chr6:59620457-59620675 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 17, 36

Conread position: 131-391
Cow position: chr6:24515405-24515155 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 180
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 37

Conread position: 131-420
Cow position: chr6:57405336-57405054 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 201
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 19, 36

Conread position: 131-447
Cow position: chr6:24961933-24962241 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 35

Conread position: 132-368
Cow position: chr6:7539362-7539595 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 36

Conread position: 132-372
Cow position: chr6:53139140-53138896 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 17, 35

Conread position: 132-391
Cow position: chr6:46400616-46400370 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 146, 29

Conread position: 133-409
Cow position: chr6:21869855-21869588 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 202, 31

Conread position: 136-348
Cow position: chr6:7989620-7989409 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 12, 31

Conread position: 136-407
Cow position: chr6:61137158-61137434 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 200
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 28, 148

Conread position: 136-417
Cow position: chr6:19695600-19695878 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 189
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 134, 32

Conread position: 136-518
Cow position: chr6:54864873-54864515 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 259
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 142, 30

Conread position: 137-387
Cow position: chr6:58732520-58732264 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 11, 30

Conread position: 137-411
Cow position: chr6:38641292-38641560 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 200
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 16, 30

Conread position: 137-474
Cow position: chr6:47988977-47989299 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 219
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 91

Conread position: 138-411
Cow position: chr6:445106-445386 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 195
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 11, 30

Conread position: 139-313
Cow position: chr6:51463820-51463647 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 14, 29

Conread position: 139-520
Cow position: chr6:415891-416272 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 14

Conread position: 143-450
Cow position: chr6:33918050-33917740 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 210
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 181, 23

Conread position: 146-323
Cow position: chr6:46245519-46245342 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 125, 20

Conread position: 146-360
Cow position: chr6:33276843-33277057 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 132, 24

Conread position: 146-385
Cow position: chr6:48187777-48187546 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 125, 20

Conread position: 146-411
Cow position: chr6:22503119-22502848 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 189
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 105, 20

Conread position: 146-421
Cow position: chr6:12092180-12091921 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 186
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 190, 20

Conread position: 147-307
Cow position: chr6:89103-88945 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 147-386
Cow position: chr6:37467734-37467504 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 135, 19

Conread position: 147-402
Cow position: chr6:53731326-53731578 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 185
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 128, 18

Conread position: 147-411
Cow position: chr6:6400753-6401017 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 19

Conread position: 147-411
Cow position: chr6:16423504-16423765 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 19

Conread position: 147-411
Cow position: chr6:21231341-21231587 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 196
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 189, 19

Conread position: 147-411
Cow position: chr6:52412659-52412922 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 124, 19

Conread position: 147-418
Cow position: chr6:66131113-66131377 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 189
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 124, 19

Conread position: 147-518
Cow position: chr6:21456885-21456528 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 21

Conread position: 148-421
Cow position: chr6:14850908-14850642 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 185
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 130, 18

Conread position: 148-421
Cow position: chr6:16191470-16191750 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 183
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 134, 61

Conread position: 149-411
Cow position: chr6:53519816-53519561 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 186
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 129, 17

Conread position: 153-421
Cow position: chr6:36652228-36652494 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 182
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 184, 74

Conread position: 155-400
Cow position: chr6:60819325-60819565 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 16, 74

Conread position: 157-411
Cow position: chr6:30973855-30974109 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 180
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 74, 7

Conread position: 157-411
Cow position: chr6:37149005-37149252 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 13, 70

Conread position: 159-402
Cow position: chr6:1499452-1499697 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 186
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 9, 87

Conread position: 159-419
Cow position: chr6:1703628-1703876 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 179
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 169

Conread position: 160-427
Cow position: chr6:25008529-25008796 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 6, 62

Conread position: 161-446
Cow position: chr6:8788221-8787942 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 5, 81

Conread position: 164-319
Cow position: chr6:37246610-37246451 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 110, 0

Conread position: 164-401
Cow position: chr6:63252103-63251870 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 116, 49

Conread position: 164-410
Cow position: chr6:47574725-47574968 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 68

Conread position: 164-411
Cow position: chr6:528457-528221 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 167
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 114, 0

Conread position: 164-421
Cow position: chr6:15300997-15300757 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 114, 43

Conread position: 165-371
Cow position: chr6:54492639-54492427 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 15, 166

Conread position: 167-405
Cow position: chr6:57680612-57680379 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 59, 156

Conread position: 167-410
Cow position: chr6:9452950-9452708 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 168, 152

Conread position: 167-413
Cow position: chr6:28318232-28318463 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 165, 42

Conread position: 168-401
Cow position: chr6:49604507-49604729 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 166, 20

Conread position: 177-364
Cow position: chr6:53453601-53453792 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 97, 51

Conread position: 177-386
Cow position: chr6:58364179-58363970 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 153, 56

Conread position: 177-401
Cow position: chr6:17334224-17334000 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 99, 56

Conread position: 177-409
Cow position: chr6:54991169-54990940 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 158, 53

Conread position: 177-411
Cow position: chr6:47355657-47355886 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 161
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 174, 49

Conread position: 177-421
Cow position: chr6:5114214-5113977 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 183
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 158, 49

Conread position: 177-421
Cow position: chr6:11246597-11246836 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 158, 32

Conread position: 177-436
Cow position: chr6:19012902-19013158 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 174
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 161, 65

Conread position: 179-411
Cow position: chr6:12543098-12542867 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 155, 47

Conread position: 179-421
Cow position: chr6:78077-77844 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 164
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 93, 69

Conread position: 180-411
Cow position: chr6:24934794-24934563 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 153
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 92, 155

Conread position: 180-411
Cow position: chr6:49694211-49694442 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 98, 72

Conread position: 181-334
Cow position: chr6:18904505-18904355 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 67, 0

Conread position: 182-409
Cow position: chr6:57546378-57546161 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 182, 34

Conread position: 183-378
Cow position: chr6:31847381-31847195 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 92, 49

Conread position: 183-411
Cow position: chr6:61608346-61608575 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 183-419
Cow position: chr6:120078-120317 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 126, 92

Conread position: 183-419
Cow position: chr6:55763693-55763925 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 95, 30

Conread position: 184-343
Cow position: chr6:50020370-50020533 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 92, 0

Conread position: 184-345
Cow position: chr6:32987158-32987000 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 94, 64

Conread position: 184-386
Cow position: chr6:60783710-60783908 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 141
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 101, 43

Conread position: 184-401
Cow position: chr6:633521-633304 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 88, 169

Conread position: 184-409
Cow position: chr6:40834633-40834407 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 142, 164

Conread position: 184-411
Cow position: chr6:15243091-15243318 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 174
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 20, 114

Conread position: 184-411
Cow position: chr6:35993417-35993647 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 101, 143

Conread position: 184-422
Cow position: chr6:59108782-59109020 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 81, 25

Conread position: 184-423
Cow position: chr6:44984166-44984405 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 94, 49

Conread position: 184-455
Cow position: chr6:60850550-60850278 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 183
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 88, 165

Conread position: 185-411
Cow position: chr6:47640596-47640369 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 185-421
Cow position: chr6:26450158-26450386 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 176, 91

Conread position: 185-518
Cow position: chr6:39093585-39093894 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 220
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 150, 41

Conread position: 187-411
Cow position: chr6:60739858-60740077 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 91, 26

Conread position: 188-387
Cow position: chr6:67634010-67633812 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 164

Conread position: 188-410
Cow position: chr6:65264691-65264480 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 85, 32

Conread position: 189-377
Cow position: chr6:19755232-19755046 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 130
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 145, 85

Conread position: 190-411
Cow position: chr6:57298866-57299078 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 84, 22

Conread position: 191-411
Cow position: chr6:19264653-19264436 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 27, 37

Conread position: 192-402
Cow position: chr6:48112052-48112251 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 143, 38

Conread position: 192-411
Cow position: chr6:4692136-4691912 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 79, 0

Conread position: 193-411
Cow position: chr6:48010676-48010460 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 79, 140

Conread position: 195-397
Cow position: chr6:9219124-9219321 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 140, 31

Conread position: 196-445
Cow position: chr6:17313582-17313829 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 150, 218

Conread position: 197-411
Cow position: chr6:57571326-57571542 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 101, 0

Conread position: 209-517
Cow position: chr6:30123332-30123027 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 205
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 156

Conread position: 211-411
Cow position: chr6:8125190-8125389 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 72

Conread position: 211-411
Cow position: chr6:12668965-12669162 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 104

Conread position: 213-411
Cow position: chr6:38640096-38640296 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 122, 0

Conread position: 213-421
Cow position: chr6:60118015-60118222 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 17

Conread position: 214-402
Cow position: chr6:37376651-37376460 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 121, 0

Conread position: 216-394
Cow position: chr6:53841631-53841460 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 119, 75

Conread position: 216-395
Cow position: chr6:18968912-18968733 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 8, 52

Conread position: 216-411
Cow position: chr6:12829354-12829162 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 142, 27

Conread position: 216-419
Cow position: chr6:46292475-46292276 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 8, 26

Conread position: 216-421
Cow position: chr6:582404-582200 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 8, 60

Conread position: 217-455
Cow position: chr6:38609837-38610070 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 64, 143

Conread position: 221-409
Cow position: chr6:38233833-38234020 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 114, 24

Conread position: 223-401
Cow position: chr6:33150531-33150355 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 113, 120

Conread position: 226-411
Cow position: chr6:10225761-10225584 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 55

Conread position: 228-411
Cow position: chr6:6965507-6965335 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 107, 28

Conread position: 228-411
Cow position: chr6:47799171-47799356 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 45, 135

Conread position: 228-518
Cow position: chr6:54573123-54573404 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 197
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 130

Conread position: 230-435
Cow position: chr6:54287954-54288161 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 44, 126

Conread position: 232-411
Cow position: chr6:58597620-58597443 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 103, 83

Conread position: 237-518
Cow position: chr6:6470750-6470486 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 194
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 98, 48

Conread position: 238-411
Cow position: chr6:59603317-59603145 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 97, 46

Conread position: 249-411
Cow position: chr6:61269210-61269375 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 249-520
Cow position: chr6:16764751-16764499 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 87, 65

Conread position: 256-411
Cow position: chr6:66375422-66375270 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 79, 90

Conread position: 258-402
Cow position: chr6:60274098-60273957 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 61, 36

Conread position: 259-402
Cow position: chr6:37332018-37332162 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 88, 63

Conread position: 267-402
Cow position: chr6:63169083-63168941 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 269-411
Cow position: chr6:23466108-23465970 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 91, 65

Conread position: 270-410
Cow position: chr6:15022625-15022485 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 67, 9

Conread position: 271-411
Cow position: chr6:22985935-22985792 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 273-445
Cow position: chr6:17068724-17068554 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 64, 98

Conread position: 274-411
Cow position: chr6:694221-694088 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 61, 44

Conread position: 277-419
Cow position: chr6:36493620-36493477 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 56, 129

Conread position: 280-411
Cow position: chr6:18118120-18117986 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 284-411
Cow position: chr6:59770163-59770291 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 287-409
Cow position: chr6:60468176-60468299 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 104
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 387-520
Cow position: chr6:59092010-59092144 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 50, 32

Conread position: 414-520
Cow position: chr6:14896992-14896887 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 26, 0

Show alignments to all cow chromosomes.