Cow genome map

Conread name: rthg20_o8.y1

Conread position: 21-411
Cow position: chr9:38793397-38793022 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 24

Conread position: 27-455
Cow position: chr9:28726352-28726757 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 79

Conread position: 35-411
Cow position: chr9:5218814-5219164 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 71

Conread position: 36-420
Cow position: chr9:52745915-52745547 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 242
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 235, 9

Conread position: 39-401
Cow position: chr9:5442350-5442005 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 261
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 67, 13

Conread position: 40-237
Cow position: chr9:36383659-36383468 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 44-411
Cow position: chr9:8338407-8338033 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 253
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 63, 100

Conread position: 46-362
Cow position: chr9:8997911-8997602 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 230
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 60, 80

Conread position: 46-411
Cow position: chr9:14974572-14974913 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 264
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 107, 48

Conread position: 47-250
Cow position: chr9:49292736-49292936 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 99

Conread position: 47-263
Cow position: chr9:27345083-27345288 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 107, 59

Conread position: 47-284
Cow position: chr9:29338682-29338905 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 59, 9

Conread position: 47-311
Cow position: chr9:26099697-26099445 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 175
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 102, 56

Conread position: 47-314
Cow position: chr9:33823445-33823201 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 191
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 61, 0

Conread position: 47-317
Cow position: chr9:25969700-25969442 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 188
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 119, 59

Conread position: 47-320
Cow position: chr9:975377-975102 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 191
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 59, 95

Conread position: 47-320
Cow position: chr9:22616973-22616721 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 198
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 59, 79

Conread position: 47-330
Cow position: chr9:3379465-3379209 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 204
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 48, 0

Conread position: 47-332
Cow position: chr9:22440150-22440425 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 196
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 108, 127

Conread position: 47-333
Cow position: chr9:18121559-18121285 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 198
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 59, 78

Conread position: 47-340
Cow position: chr9:3807386-3807665 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 205
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 106, 50

Conread position: 47-345
Cow position: chr9:38961083-38961363 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 212
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 60, 80

Conread position: 47-347
Cow position: chr9:37069197-37069501 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 219
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 60, 128

Conread position: 47-353
Cow position: chr9:42585272-42585568 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 216
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 60, 80

Conread position: 47-353
Cow position: chr9:53608040-53608332 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 58

Conread position: 47-362
Cow position: chr9:62400309-62400014 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 220
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 37, 33

Conread position: 47-366
Cow position: chr9:8600709-8600383 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 217
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 124

Conread position: 47-366
Cow position: chr9:52409101-52409403 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 212
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 247, 57

Conread position: 47-368
Cow position: chr9:44466995-44467301 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 221
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 101, 61

Conread position: 47-370
Cow position: chr9:38184124-38184437 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 228
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 60, 80

Conread position: 47-371
Cow position: chr9:42998108-42998421 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 236
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 59, 82

Conread position: 47-375
Cow position: chr9:9491142-9490836 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 232
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 59, 51

Conread position: 47-375
Cow position: chr9:31077324-31077641 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 236
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 101, 59

Conread position: 47-383
Cow position: chr9:8868782-8869109 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 238
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 101, 22

Conread position: 47-386
Cow position: chr9:2023048-2022725 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 222
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 108, 60

Conread position: 47-386
Cow position: chr9:21030671-21030339 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 236
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 101, 59

Conread position: 47-388
Cow position: chr9:26391118-26390798 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 226
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 231, 59

Conread position: 47-388
Cow position: chr9:32396303-32395971 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 225
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 71

Conread position: 47-390
Cow position: chr9:4928979-4928653 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 52

Conread position: 47-391
Cow position: chr9:18002598-18002928 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 247
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 106, 50

Conread position: 47-394
Cow position: chr9:6880122-6879793 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 237
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 231, 62

Conread position: 47-399
Cow position: chr9:5621677-5622020 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 78

Conread position: 47-401
Cow position: chr9:34000258-34000604 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 252
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 101, 50

Conread position: 47-401
Cow position: chr9:36999680-37000045 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 257
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 51, 136

Conread position: 47-401
Cow position: chr9:47499844-47500196 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 247
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 101, 30

Conread position: 47-401
Cow position: chr9:57950977-57951305 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 242
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 106, 17

Conread position: 47-402
Cow position: chr9:20848291-20847944 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 59

Conread position: 47-402
Cow position: chr9:55074781-55075117 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 249
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 231, 59

Conread position: 47-402
Cow position: chr9:59507425-59507104 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 250
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 91, 53

Conread position: 47-405
Cow position: chr9:18381214-18380874 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 250
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 101, 58

Conread position: 47-406
Cow position: chr9:13205216-13205561 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 259
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 288, 58

Conread position: 47-407
Cow position: chr9:28773471-28773131 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 59

Conread position: 47-407
Cow position: chr9:28948207-28947868 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 243
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 60, 85

Conread position: 47-407
Cow position: chr9:29006921-29006567 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 258
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 48, 40

Conread position: 47-407
Cow position: chr9:29184783-29185127 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 253
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 287, 57

Conread position: 47-408
Cow position: chr9:47171847-47172199 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 231
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 97, 59

Conread position: 47-409
Cow position: chr9:6192110-6192451 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 26

Conread position: 47-409
Cow position: chr9:17740591-17740934 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 61

Conread position: 47-410
Cow position: chr9:23430795-23431140 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 254
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 288, 17

Conread position: 47-410
Cow position: chr9:44831703-44832048 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 259
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 59, 78

Conread position: 47-411
Cow position: chr9:5763276-5763627 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 58

Conread position: 47-411
Cow position: chr9:7634618-7634277 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 263
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 96, 38

Conread position: 47-411
Cow position: chr9:8637010-8636673 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 258
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 101, 18

Conread position: 47-411
Cow position: chr9:9461305-9461651 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 237
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 106, 20

Conread position: 47-411
Cow position: chr9:9552439-9552096 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 260
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 288, 59

Conread position: 47-411
Cow position: chr9:10308655-10308995 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 252
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 102, 20

Conread position: 47-411
Cow position: chr9:20416157-20416504 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 48

Conread position: 47-411
Cow position: chr9:23388325-23388673 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 50

Conread position: 47-411
Cow position: chr9:24997150-24997513 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 259
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 60, 50

Conread position: 47-411
Cow position: chr9:28747171-28747514 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 50

Conread position: 47-411
Cow position: chr9:31078730-31079076 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 18

Conread position: 47-411
Cow position: chr9:35375775-35375431 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 247
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 231, 59

Conread position: 47-411
Cow position: chr9:47905926-47906275 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 59

Conread position: 47-411
Cow position: chr9:54528869-54528518 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 79

Conread position: 47-411
Cow position: chr9:61997242-61997592 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 57

Conread position: 47-413
Cow position: chr9:37017238-37016895 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 244
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 106, 61

Conread position: 47-417
Cow position: chr9:1950276-1949923 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 261
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 231, 58

Conread position: 47-417
Cow position: chr9:9443238-9443604 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 264
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 59, 79

Conread position: 47-419
Cow position: chr9:20810713-20811067 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 51

Conread position: 47-419
Cow position: chr9:21888523-21888167 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 259
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 106, 53

Conread position: 47-419
Cow position: chr9:27697377-27697726 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 251
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 25, 51

Conread position: 47-419
Cow position: chr9:50606599-50606951 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 257
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 106, 60

Conread position: 47-420
Cow position: chr9:5510078-5509722 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 61

Conread position: 47-420
Cow position: chr9:34310388-34310022 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 254
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 235, 59

Conread position: 47-420
Cow position: chr9:41789641-41789282 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 253
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 106, 83

Conread position: 47-421
Cow position: chr9:824309-823957 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 244
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 103, 61

Conread position: 47-421
Cow position: chr9:1520375-1520740 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 59

Conread position: 47-421
Cow position: chr9:5433985-5433629 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 269
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 59, 79

Conread position: 47-421
Cow position: chr9:5594854-5594500 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 259
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 105, 59

Conread position: 47-421
Cow position: chr9:8534332-8534693 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 260
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 226, 59

Conread position: 47-421
Cow position: chr9:13994542-13994163 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 280
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 59, 79

Conread position: 47-421
Cow position: chr9:18162798-18163163 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 263
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 224, 59

Conread position: 47-421
Cow position: chr9:21459801-21460157 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 59

Conread position: 47-421
Cow position: chr9:34696942-34697305 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 270
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 59, 70

Conread position: 47-421
Cow position: chr9:35167527-35167173 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 258
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 25, 71

Conread position: 47-421
Cow position: chr9:42445619-42445986 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 264
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 69, 59

Conread position: 47-421
Cow position: chr9:59386426-59386772 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 257
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 101, 59

Conread position: 47-424
Cow position: chr9:64092040-64091674 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 42

Conread position: 47-429
Cow position: chr9:42498182-42497818 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 266
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 99, 21

Conread position: 47-436
Cow position: chr9:20900761-20901139 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 267
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 61, 124

Conread position: 47-439
Cow position: chr9:8951277-8950880 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 270
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 59, 15

Conread position: 47-445
Cow position: chr9:30402063-30402450 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 277
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 30, 62

Conread position: 47-445
Cow position: chr9:34957698-34958081 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 78

Conread position: 47-445
Cow position: chr9:36445975-36445595 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 280
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 59, 79

Conread position: 47-500
Cow position: chr9:8998709-8998291 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 312
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 99, 61

Conread position: 47-511
Cow position: chr9:54610878-54611331 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 73

Conread position: 47-512
Cow position: chr9:30138498-30138051 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 128

Conread position: 47-517
Cow position: chr9:7410136-7409688 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 47-518
Cow position: chr9:5246199-5245777 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 315
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 288, 50

Conread position: 47-518
Cow position: chr9:33682029-33681583 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 50

Conread position: 47-520
Cow position: chr9:56773433-56772998 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 76

Conread position: 48-410
Cow position: chr9:46316435-46316776 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 76

Conread position: 48-411
Cow position: chr9:17310187-17310559 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 248
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 60, 169

Conread position: 48-413
Cow position: chr9:9516418-9516760 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 58

Conread position: 49-260
Cow position: chr9:40316917-40317118 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 202, 57

Conread position: 49-311
Cow position: chr9:47385431-47385682 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 177
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 223, 57

Conread position: 49-318
Cow position: chr9:5268908-5268648 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 191
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 99, 56

Conread position: 49-378
Cow position: chr9:28969733-28970048 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 222
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 231, 57

Conread position: 49-378
Cow position: chr9:55534258-55534578 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 217
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 188, 57

Conread position: 49-384
Cow position: chr9:30664430-30664747 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 238
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 229, 48

Conread position: 49-392
Cow position: chr9:32812698-32812374 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 244
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 57, 77

Conread position: 49-395
Cow position: chr9:34666760-34666442 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 244
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 286, 56

Conread position: 49-402
Cow position: chr9:35203251-35202892 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 236
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 81, 55

Conread position: 49-409
Cow position: chr9:3411120-3410789 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 249
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 143, 59

Conread position: 49-411
Cow position: chr9:1951918-1952264 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 252
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 286, 59

Conread position: 49-411
Cow position: chr9:3388043-3387695 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 242
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 57, 78

Conread position: 49-411
Cow position: chr9:32238737-32238387 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 245
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 231, 57

Conread position: 49-411
Cow position: chr9:50076442-50076067 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 260
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 48, 131

Conread position: 49-418
Cow position: chr9:50899856-50899500 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 237
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 95, 57

Conread position: 49-420
Cow position: chr9:22318690-22318347 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 248
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 286, 57

Conread position: 49-421
Cow position: chr9:9723531-9723882 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 262
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 214, 57

Conread position: 49-421
Cow position: chr9:18215561-18215913 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 250
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 58

Conread position: 49-421
Cow position: chr9:20960930-20961283 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 259
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 31, 58

Conread position: 49-421
Cow position: chr9:34016206-34016566 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 237
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 223, 57

Conread position: 49-421
Cow position: chr9:39681710-39681336 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 268
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 57, 77

Conread position: 49-421
Cow position: chr9:50080694-50081043 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 260
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 105, 57

Conread position: 49-445
Cow position: chr9:8937500-8937127 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 266
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 223, 57

Conread position: 49-445
Cow position: chr9:35904399-35904770 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 273
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 104, 57

Conread position: 50-333
Cow position: chr9:22656595-22656867 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 191
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 222, 55

Conread position: 50-338
Cow position: chr9:47882489-47882212 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 189
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 221, 56

Conread position: 50-347
Cow position: chr9:49982746-49983031 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 216
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 98, 56

Conread position: 50-387
Cow position: chr9:48564446-48564114 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 241
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 56, 76

Conread position: 50-402
Cow position: chr9:19542259-19541920 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 239
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 56, 74

Conread position: 50-413
Cow position: chr9:18252579-18252916 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 250
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 230, 47

Conread position: 50-423
Cow position: chr9:28025617-28025972 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 237
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 222, 56

Conread position: 50-427
Cow position: chr9:59479061-59478687 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 248
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 69

Conread position: 52-333
Cow position: chr9:29776248-29776518 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 189
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 220, 50

Conread position: 53-333
Cow position: chr9:20406983-20406719 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 204
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 9

Conread position: 53-333
Cow position: chr9:27038913-27039179 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 188
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 219, 53

Conread position: 53-386
Cow position: chr9:25964476-25964802 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 230
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 53, 74

Conread position: 53-401
Cow position: chr9:28983534-28983198 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 235
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 31, 55

Conread position: 53-402
Cow position: chr9:20942265-20942595 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 234
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 225, 15

Conread position: 53-405
Cow position: chr9:49321724-49321385 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 236
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 54, 117

Conread position: 53-409
Cow position: chr9:56453699-56453344 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 9

Conread position: 53-410
Cow position: chr9:22361361-22361017 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 52

Conread position: 53-411
Cow position: chr9:19714418-19714086 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 251
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 113, 49

Conread position: 53-411
Cow position: chr9:38344243-38343893 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 52

Conread position: 53-421
Cow position: chr9:648122-647774 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 244
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 95, 45

Conread position: 53-433
Cow position: chr9:39152339-39152698 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 250
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 278, 53

Conread position: 53-520
Cow position: chr9:44821956-44822402 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 310
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 26, 54

Conread position: 54-333
Cow position: chr9:53631181-53631448 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 184
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 218, 52

Conread position: 54-342
Cow position: chr9:19539444-19539163 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 212
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 95, 54

Conread position: 54-420
Cow position: chr9:6397441-6397785 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 246
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 218, 52

Conread position: 54-421
Cow position: chr9:10966288-10965939 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 240
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 188, 51

Conread position: 55-366
Cow position: chr9:21674631-21674943 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 207
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 222, 49

Conread position: 55-401
Cow position: chr9:30189460-30189111 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 237
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 14, 43

Conread position: 55-402
Cow position: chr9:34093068-34093426 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 241
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 51, 108

Conread position: 55-414
Cow position: chr9:10092049-10092391 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 234
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 51, 57

Conread position: 55-419
Cow position: chr9:33218606-33218957 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 257
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 98, 51

Conread position: 57-417
Cow position: chr9:9199441-9199780 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 259
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 255, 48

Conread position: 59-326
Cow position: chr9:35101216-35100958 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 94, 38

Conread position: 60-435
Cow position: chr9:41513983-41513606 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 264
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 47, 121

Conread position: 62-421
Cow position: chr9:33093283-33092949 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 248
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 86, 44

Conread position: 63-378
Cow position: chr9:37528794-37528490 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 222
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 87, 42

Conread position: 64-363
Cow position: chr9:31639981-31640268 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 208
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 42, 62

Conread position: 64-421
Cow position: chr9:15805584-15805926 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 249
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 206, 42

Conread position: 64-450
Cow position: chr9:43037832-43037452 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 261
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 53, 42

Conread position: 65-401
Cow position: chr9:11299361-11299674 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 41

Conread position: 67-411
Cow position: chr9:26278824-26279163 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 104

Conread position: 68-518
Cow position: chr9:5319962-5319546 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 310
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 85, 38

Conread position: 71-351
Cow position: chr9:53412920-53413183 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 23

Conread position: 71-517
Cow position: chr9:47954895-47955317 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 291
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 83, 35

Conread position: 73-443
Cow position: chr9:10666687-10667050 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 253
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 34, 22

Conread position: 74-518
Cow position: chr9:50976920-50977329 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 304
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 32, 7

Conread position: 76-443
Cow position: chr9:15950817-15951183 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 244
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 7, 143

Conread position: 79-518
Cow position: chr9:41416672-41416257 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 289
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 197, 27

Conread position: 81-410
Cow position: chr9:29034708-29035029 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 233
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 27, 61

Conread position: 83-443
Cow position: chr9:54924951-54924595 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 243
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 70, 23

Conread position: 84-367
Cow position: chr9:52787208-52787492 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 193
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 71, 78

Conread position: 85-411
Cow position: chr9:35850228-35849910 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 228
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 15, 81

Conread position: 85-411
Cow position: chr9:36410024-36410352 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 218
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 12, 77

Conread position: 91-375
Cow position: chr9:18072795-18073073 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 211
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 30, 15

Conread position: 91-411
Cow position: chr9:16538491-16538809 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 232
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 15, 28

Conread position: 97-411
Cow position: chr9:19068112-19067788 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 229
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 112, 69

Conread position: 105-429
Cow position: chr9:33940916-33940594 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 231
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 11, 64

Conread position: 106-305
Cow position: chr9:25958717-25958529 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 106-335
Cow position: chr9:50295718-50295945 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 157
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 192, 56

Conread position: 106-419
Cow position: chr9:35533646-35533956 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 211
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 172, 59

Conread position: 106-427
Cow position: chr9:20989147-20989461 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 230
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 15, 62

Conread position: 110-410
Cow position: chr9:51205024-51204734 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 211
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 18, 35

Conread position: 117-421
Cow position: chr9:22151791-22152088 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 222
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 11, 51

Conread position: 119-420
Cow position: chr9:17929065-17928755 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 203
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 99, 11

Conread position: 119-519
Cow position: chr9:44914803-44915173 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 271
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 158, 48

Conread position: 120-263
Cow position: chr9:1846719-1846861 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 44

Conread position: 120-316
Cow position: chr9:26310850-26310655 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 47

Conread position: 120-320
Cow position: chr9:1350154-1350350 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 41

Conread position: 120-342
Cow position: chr9:15982786-15983009 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 156, 41

Conread position: 120-353
Cow position: chr9:5393342-5393110 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 215, 42

Conread position: 120-355
Cow position: chr9:22227793-22228023 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 46, 24

Conread position: 120-356
Cow position: chr9:1855571-1855326 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 114, 46

Conread position: 120-387
Cow position: chr9:3924908-3924664 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 215, 44

Conread position: 120-387
Cow position: chr9:8548101-8547844 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 182
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 158, 41

Conread position: 120-391
Cow position: chr9:64516805-64517073 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 195
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 150, 47

Conread position: 120-401
Cow position: chr9:29825321-29825045 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 205
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 215, 43

Conread position: 120-402
Cow position: chr9:5226873-5227158 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 46

Conread position: 120-402
Cow position: chr9:20091330-20091062 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 33, 48

Conread position: 120-402
Cow position: chr9:22114341-22114621 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 205
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 33, 47

Conread position: 120-402
Cow position: chr9:44710113-44709840 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 158, 45

Conread position: 120-402
Cow position: chr9:57896833-57897095 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 28, 47

Conread position: 120-408
Cow position: chr9:11317767-11317479 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 192
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 132, 40

Conread position: 120-409
Cow position: chr9:55084005-55084296 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 213
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 28, 47

Conread position: 120-409
Cow position: chr9:55796046-55795763 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 207
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 216, 52

Conread position: 120-409
Cow position: chr9:63746096-63745819 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 200
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 26, 47

Conread position: 120-411
Cow position: chr9:32371468-32371751 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 204
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 33, 47

Conread position: 120-411
Cow position: chr9:45141326-45141594 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 214
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 215, 31

Conread position: 120-411
Cow position: chr9:45285239-45285529 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 216
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 29, 47

Conread position: 120-411
Cow position: chr9:58451807-58452072 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 204
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 120-417
Cow position: chr9:21840367-21840072 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 213
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 28, 47

Conread position: 120-418
Cow position: chr9:61224133-61223835 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 192
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 33, 48

Conread position: 120-421
Cow position: chr9:10011092-10010807 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 206
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 19

Conread position: 120-421
Cow position: chr9:22696508-22696219 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 218
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 26, 34

Conread position: 120-421
Cow position: chr9:45756649-45756360 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 215
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 28, 48

Conread position: 120-423
Cow position: chr9:5327543-5327253 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 208
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 33, 0

Conread position: 120-443
Cow position: chr9:55256258-55256575 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 228
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 32, 37

Conread position: 121-349
Cow position: chr9:52689333-52689553 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 162, 43

Conread position: 121-388
Cow position: chr9:58439491-58439753 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 181
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 224, 45

Conread position: 121-401
Cow position: chr9:18343013-18342749 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 203
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 28, 41

Conread position: 121-401
Cow position: chr9:34689321-34689583 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 201
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 46

Conread position: 121-407
Cow position: chr9:5501140-5500863 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 211
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 214, 18

Conread position: 121-412
Cow position: chr9:54681792-54681512 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 149, 45

Conread position: 121-421
Cow position: chr9:22443321-22443630 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 219
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 92, 46

Conread position: 121-421
Cow position: chr9:34468302-34468581 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 208
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 32, 43

Conread position: 122-328
Cow position: chr9:7866355-7866151 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 59

Conread position: 122-351
Cow position: chr9:48343891-48343666 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 154
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 212, 44

Conread position: 122-387
Cow position: chr9:60037945-60037680 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 205
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 56, 40

Conread position: 122-409
Cow position: chr9:54997733-54998021 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 197
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 31, 45

Conread position: 122-410
Cow position: chr9:62357241-62357524 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 200
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 32, 45

Conread position: 122-411
Cow position: chr9:17871818-17872104 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 217
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 153, 44

Conread position: 122-421
Cow position: chr9:13169381-13169666 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 211
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 219, 31

Conread position: 124-421
Cow position: chr9:22638387-22638099 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 198
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 12, 18

Conread position: 125-347
Cow position: chr9:10118376-10118596 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 41, 108

Conread position: 125-357
Cow position: chr9:3070136-3070364 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 30, 42

Conread position: 125-358
Cow position: chr9:45170882-45171110 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 210, 39

Conread position: 125-369
Cow position: chr9:45974482-45974240 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 163
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 128, 44

Conread position: 125-387
Cow position: chr9:27052046-27052311 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 177
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 173, 36

Conread position: 125-387
Cow position: chr9:49404041-49403789 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 193
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 41, 28

Conread position: 125-394
Cow position: chr9:62360942-62361212 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 183
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 146, 31

Conread position: 125-410
Cow position: chr9:64155569-64155844 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 24, 37

Conread position: 125-411
Cow position: chr9:4861676-4861390 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 169, 31

Conread position: 125-414
Cow position: chr9:9405768-9406050 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 209
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 24, 37

Conread position: 125-420
Cow position: chr9:47875661-47875962 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 209
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 124, 38

Conread position: 125-421
Cow position: chr9:9416120-9416399 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 211
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 29, 42

Conread position: 125-520
Cow position: chr9:13670924-13670555 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 43

Conread position: 126-313
Cow position: chr9:9624742-9624927 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 26, 42

Conread position: 126-372
Cow position: chr9:36067191-36066954 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 153, 40

Conread position: 126-395
Cow position: chr9:10144186-10144457 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 41

Conread position: 126-401
Cow position: chr9:26344699-26344952 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 201
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 209, 40

Conread position: 126-401
Cow position: chr9:59013049-59013326 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 203
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 209, 38

Conread position: 126-421
Cow position: chr9:1084570-1084864 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 193
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 146, 43

Conread position: 127-421
Cow position: chr9:41773085-41773381 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 197
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 27, 41

Conread position: 127-518
Cow position: chr9:31626434-31626058 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 263
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 39, 17

Conread position: 128-296
Cow position: chr9:20465430-20465596 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 7

Conread position: 128-432
Cow position: chr9:12356140-12355839 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 201
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 150, 28

Conread position: 130-408
Cow position: chr9:1712206-1712467 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 207
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 205, 23

Conread position: 131-333
Cow position: chr9:5756722-5756915 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 17, 36

Conread position: 131-411
Cow position: chr9:26086348-26086062 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 196
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 133, 33

Conread position: 131-413
Cow position: chr9:5532233-5531948 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 197
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 142, 35

Conread position: 131-421
Cow position: chr9:6225166-6225458 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 214
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 32, 105

Conread position: 131-421
Cow position: chr9:41283309-41283012 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 209
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 29, 64

Conread position: 131-477
Cow position: chr9:10877585-10877930 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 207
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 23, 36

Conread position: 132-345
Cow position: chr9:40542394-40542191 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 34, 24

Conread position: 132-401
Cow position: chr9:27076971-27077226 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 35

Conread position: 132-411
Cow position: chr9:24887477-24887212 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 205
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 21, 0

Conread position: 132-420
Cow position: chr9:55287611-55287894 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 204
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 21, 34

Conread position: 133-304
Cow position: chr9:58131445-58131615 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 18, 34

Conread position: 133-409
Cow position: chr9:30749306-30749581 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 188
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 20, 34

Conread position: 134-367
Cow position: chr9:61846872-61847102 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 19

Conread position: 136-366
Cow position: chr9:19637363-19637588 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 17, 7

Conread position: 136-405
Cow position: chr9:16745953-16745684 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 17, 28

Conread position: 136-410
Cow position: chr9:4128507-4128774 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 17, 32

Conread position: 136-411
Cow position: chr9:8288894-8288621 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 186
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 17

Conread position: 137-413
Cow position: chr9:13221618-13221888 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 180
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 198, 24

Conread position: 139-409
Cow position: chr9:51620708-51620450 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 201
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 196, 27

Conread position: 140-402
Cow position: chr9:55118350-55118097 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 188
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 12, 27

Conread position: 140-436
Cow position: chr9:47869278-47868990 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 211
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 205, 23

Conread position: 146-402
Cow position: chr9:36827390-36827150 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 189
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 192, 20

Conread position: 146-520
Cow position: chr9:8563106-8562744 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 17

Conread position: 147-367
Cow position: chr9:63905336-63905561 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 153
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 214

Conread position: 147-378
Cow position: chr9:41653053-41652825 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 175
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 188, 20

Conread position: 147-395
Cow position: chr9:49983428-49983665 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 181
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 188, 19

Conread position: 147-398
Cow position: chr9:35305856-35306099 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 178
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 99, 19

Conread position: 147-411
Cow position: chr9:33598245-33597992 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 188
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 131, 19

Conread position: 147-425
Cow position: chr9:41995978-41995702 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 170
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 126, 19

Conread position: 147-427
Cow position: chr9:34287058-34286789 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 19

Conread position: 147-439
Cow position: chr9:11068205-11068497 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 200
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 94, 19

Conread position: 147-455
Cow position: chr9:11192904-11193209 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 209
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 117, 34

Conread position: 148-387
Cow position: chr9:16182227-16182457 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 19, 0

Conread position: 148-409
Cow position: chr9:34901852-34902099 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 187, 18

Conread position: 149-411
Cow position: chr9:34374667-34374918 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 197
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 17, 0

Conread position: 149-411
Cow position: chr9:34919004-34919254 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 185
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 129, 17

Conread position: 149-411
Cow position: chr9:38846087-38846331 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 183
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 186, 14

Conread position: 150-422
Cow position: chr9:34742466-34742730 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 191
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 190, 15

Conread position: 156-420
Cow position: chr9:5209841-5209578 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 175
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 174, 202

Conread position: 157-409
Cow position: chr9:3782617-3782375 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 187
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 121, 10

Conread position: 160-518
Cow position: chr9:31814124-31814462 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 236
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 6, 62

Conread position: 161-421
Cow position: chr9:18216848-18217102 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 174, 143

Conread position: 163-364
Cow position: chr9:52619903-52619697 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 14, 147

Conread position: 164-411
Cow position: chr9:58979650-58979403 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 117, 111

Conread position: 164-419
Cow position: chr9:55890058-55889808 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 106, 58

Conread position: 164-445
Cow position: chr9:9595705-9595977 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 199
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 170, 79

Conread position: 167-364
Cow position: chr9:61493273-61493071 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 168-411
Cow position: chr9:33119637-33119882 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 0

Conread position: 168-417
Cow position: chr9:61544894-61544651 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 173
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 167, 73

Conread position: 169-402
Cow position: chr9:766906-767135 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 152, 50

Conread position: 169-518
Cow position: chr9:29092048-29091697 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 239
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 98, 266

Conread position: 170-401
Cow position: chr9:40604193-40603961 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 108, 65

Conread position: 172-421
Cow position: chr9:56087826-56088071 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 165
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 100, 72

Conread position: 174-392
Cow position: chr9:50667663-50667446 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 91, 51

Conread position: 177-411
Cow position: chr9:62134384-62134622 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 131, 38

Conread position: 177-421
Cow position: chr9:11319396-11319637 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 184, 39

Conread position: 178-518
Cow position: chr9:35128729-35128403 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 225
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 68

Conread position: 179-419
Cow position: chr9:40302891-40303133 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 93, 228

Conread position: 181-444
Cow position: chr9:53138887-53139156 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 185
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 28, 179

Conread position: 183-445
Cow position: chr9:49710074-49709822 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 188
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 44, 141

Conread position: 184-382
Cow position: chr9:31292917-31292724 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 151, 27

Conread position: 184-400
Cow position: chr9:5238625-5238413 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 151, 113

Conread position: 184-401
Cow position: chr9:6339031-6338809 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 87, 0

Conread position: 184-410
Cow position: chr9:12175929-12175702 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 151
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 68, 153

Conread position: 184-411
Cow position: chr9:4267751-4267976 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 167

Conread position: 184-411
Cow position: chr9:32711161-32710935 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 69

Conread position: 186-419
Cow position: chr9:11313280-11313513 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 85, 29

Conread position: 188-409
Cow position: chr9:33038233-33038455 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 97, 112

Conread position: 188-421
Cow position: chr9:53762926-53762691 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 123

Conread position: 188-450
Cow position: chr9:27279543-27279279 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 61, 174

Conread position: 189-518
Cow position: chr9:6840235-6839917 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 228
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 71, 178

Conread position: 190-411
Cow position: chr9:1973165-1972949 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 88, 40

Conread position: 192-407
Cow position: chr9:1938347-1938140 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 145, 49

Conread position: 192-411
Cow position: chr9:48628251-48628034 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 143, 6

Conread position: 192-421
Cow position: chr9:28354739-28354514 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 144, 28

Conread position: 192-433
Cow position: chr9:1532111-1532342 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 142, 87

Conread position: 193-421
Cow position: chr9:17799850-17799623 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 142, 23

Conread position: 197-409
Cow position: chr9:30195429-30195222 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 138, 101

Conread position: 198-421
Cow position: chr9:19493244-19493469 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 123, 218

Conread position: 206-406
Cow position: chr9:58614700-58614502 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 62, 145

Conread position: 209-401
Cow position: chr9:61303211-61303016 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 126, 0

Conread position: 211-401
Cow position: chr9:1879583-1879396 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 10, 112

Conread position: 211-402
Cow position: chr9:9402971-9403159 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 153
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 121, 17

Conread position: 211-421
Cow position: chr9:11123281-11123488 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 38

Conread position: 213-411
Cow position: chr9:8525040-8524848 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 12, 34

Conread position: 214-411
Cow position: chr9:3738019-3738218 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 135, 0

Conread position: 214-421
Cow position: chr9:50543221-50543429 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 110, 53

Conread position: 216-411
Cow position: chr9:9654112-9654305 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 154
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 119, 7

Conread position: 216-520
Cow position: chr9:60027392-60027119 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 227
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 120, 14

Conread position: 217-411
Cow position: chr9:4340970-4341153 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 118, 129

Conread position: 222-407
Cow position: chr9:12910204-12910391 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 23, 138

Conread position: 223-409
Cow position: chr9:21080754-21080569 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 34

Conread position: 224-411
Cow position: chr9:41728448-41728264 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 149
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 142, 15

Conread position: 225-402
Cow position: chr9:31270970-31270795 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 110, 15

Conread position: 226-394
Cow position: chr9:49279665-49279487 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 226-398
Cow position: chr9:30124111-30123938 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 109, 103

Conread position: 226-411
Cow position: chr9:19555565-19555379 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 150
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 35, 111

Conread position: 226-411
Cow position: chr9:49417178-49416993 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 123

Conread position: 231-518
Cow position: chr9:31638455-31638732 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 51, 127

Conread position: 235-401
Cow position: chr9:8901042-8901211 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 43, 23

Conread position: 236-402
Cow position: chr9:44921210-44921378 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 99, 0

Conread position: 236-411
Cow position: chr9:11168911-11168736 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 113

Conread position: 237-410
Cow position: chr9:47445847-47446021 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 242-401
Cow position: chr9:4323983-4324141 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 89, 110

Conread position: 245-411
Cow position: chr9:25557137-25556978 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 61

Conread position: 249-409
Cow position: chr9:5263668-5263506 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 88, 42

Conread position: 249-425
Cow position: chr9:24872999-24872826 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 88, 61

Conread position: 251-402
Cow position: chr9:42509278-42509131 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 86, 12

Conread position: 256-432
Cow position: chr9:49292985-49293157 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 79, 88

Conread position: 259-410
Cow position: chr9:52267599-52267751 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 102, 0

Conread position: 260-411
Cow position: chr9:43757694-43757547 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 75, 62

Conread position: 275-411
Cow position: chr9:33697170-33697034 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 34

Conread position: 277-409
Cow position: chr9:41486101-41486235 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 277-411
Cow position: chr9:10819693-10819824 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 79

Conread position: 278-411
Cow position: chr9:6596096-6596230 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 59, 0

Conread position: 428-520
Cow position: chr9:26279156-26279247 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 79
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 15, 0

Show alignments to all cow chromosomes.