Cow genome map

Conread name: rthg20_o8.y1

Conread position: 27-518
Cow position: chrX:33466299-33466756 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 78

Conread position: 28-412
Cow position: chrX:19015126-19015488 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 21

Conread position: 43-411
Cow position: chrX:42994312-42994663 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 65

Conread position: 44-421
Cow position: chrX:21004357-21004743 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 267
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 62, 127

Conread position: 46-332
Cow position: chrX:31260930-31260656 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 209
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 108, 59

Conread position: 47-247
Cow position: chrX:22115580-22115392 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 47-272
Cow position: chrX:25618216-25617997 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 103, 59

Conread position: 47-311
Cow position: chrX:37072108-37072358 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 58, 0

Conread position: 47-311
Cow position: chrX:42855113-42855365 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 199
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 106, 57

Conread position: 47-313
Cow position: chrX:32623267-32623540 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 189
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 62, 126

Conread position: 47-319
Cow position: chrX:7806080-7806338 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 119, 34

Conread position: 47-320
Cow position: chrX:11581637-11581904 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 205
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 59, 26

Conread position: 47-325
Cow position: chrX:4123537-4123802 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 206
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 59, 79

Conread position: 47-332
Cow position: chrX:41083607-41083896 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 194
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 58, 118

Conread position: 47-340
Cow position: chrX:38967354-38967628 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 218
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 106, 35

Conread position: 47-343
Cow position: chrX:33020188-33020467 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 217
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 288, 59

Conread position: 47-349
Cow position: chrX:27446393-27446685 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 212
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 50

Conread position: 47-349
Cow position: chrX:33631863-33632155 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 207
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 58, 15

Conread position: 47-353
Cow position: chrX:15485923-15485631 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 224
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 101, 50

Conread position: 47-353
Cow position: chrX:21665889-21665600 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 216
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 231, 30

Conread position: 47-362
Cow position: chrX:16733044-16732740 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 208
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 59, 50

Conread position: 47-364
Cow position: chrX:35609688-35609993 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 77

Conread position: 47-364
Cow position: chrX:42086564-42086863 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 230
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 106, 60

Conread position: 47-371
Cow position: chrX:47343994-47344302 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 233
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 10, 61

Conread position: 47-377
Cow position: chrX:35409370-35409676 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 230
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 230, 59

Conread position: 47-383
Cow position: chrX:20582732-20583044 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 47-386
Cow position: chrX:47967302-47967632 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 241
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 229, 78

Conread position: 47-388
Cow position: chrX:34441745-34441422 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 48

Conread position: 47-389
Cow position: chrX:48370798-48371119 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 237
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 101, 59

Conread position: 47-394
Cow position: chrX:38439175-38439514 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 60

Conread position: 47-397
Cow position: chrX:14884262-14883920 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 59

Conread position: 47-397
Cow position: chrX:41743615-41743950 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 250
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 231, 57

Conread position: 47-400
Cow position: chrX:38007066-38006727 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 80

Conread position: 47-401
Cow position: chrX:14924702-14925040 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 254
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 101, 59

Conread position: 47-401
Cow position: chrX:23564095-23563751 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 59

Conread position: 47-402
Cow position: chrX:5919172-5919533 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 237
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 95

Conread position: 47-402
Cow position: chrX:9161290-9161622 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 244
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 59, 79

Conread position: 47-402
Cow position: chrX:13648082-13647744 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 58

Conread position: 47-402
Cow position: chrX:34990743-34991077 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 248
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 285, 59

Conread position: 47-402
Cow position: chrX:37232113-37232448 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 51

Conread position: 47-402
Cow position: chrX:45414598-45414263 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 254
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 59, 78

Conread position: 47-407
Cow position: chrX:34663157-34662800 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 257
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 59, 86

Conread position: 47-407
Cow position: chrX:43527205-43527554 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 252
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 101, 59

Conread position: 47-408
Cow position: chrX:31436182-31436521 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 59

Conread position: 47-409
Cow position: chrX:9252472-9252115 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 268
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 102, 51

Conread position: 47-409
Cow position: chrX:9651343-9650976 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 266
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 182, 59

Conread position: 47-409
Cow position: chrX:11073503-11073143 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 250
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 64, 41

Conread position: 47-409
Cow position: chrX:11655781-11656129 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 69

Conread position: 47-409
Cow position: chrX:20340189-20339844 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 59

Conread position: 47-409
Cow position: chrX:41122774-41123109 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 259
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 227, 60

Conread position: 47-409
Cow position: chrX:46771270-46770915 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 254
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 119, 59

Conread position: 47-410
Cow position: chrX:40557974-40557630 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 59

Conread position: 47-411
Cow position: chrX:878667-878330 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 258
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 16, 58

Conread position: 47-411
Cow position: chrX:917668-917318 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 250
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 175, 59

Conread position: 47-411
Cow position: chrX:4044156-4043814 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 249
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 287, 53

Conread position: 47-411
Cow position: chrX:6543958-6544307 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 80

Conread position: 47-411
Cow position: chrX:7508828-7509193 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 108

Conread position: 47-411
Cow position: chrX:9854981-9855348 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 244
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 42, 127

Conread position: 47-411
Cow position: chrX:9953822-9954189 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 253
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 42, 130

Conread position: 47-411
Cow position: chrX:10412284-10411936 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 59

Conread position: 47-411
Cow position: chrX:10831810-10831440 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 80

Conread position: 47-411
Cow position: chrX:13785676-13785310 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 123

Conread position: 47-411
Cow position: chrX:15147482-15147143 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 264
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 59, 28

Conread position: 47-411
Cow position: chrX:21592988-21593337 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 50

Conread position: 47-411
Cow position: chrX:22812764-22813121 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 56

Conread position: 47-411
Cow position: chrX:23514337-23513965 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 48

Conread position: 47-411
Cow position: chrX:24424690-24424351 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 258
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 59, 26

Conread position: 47-411
Cow position: chrX:25232288-25232643 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 242
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 251, 50

Conread position: 47-411
Cow position: chrX:27705295-27705636 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 242
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 192, 59

Conread position: 47-411
Cow position: chrX:28845546-28845883 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 251
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 234, 60

Conread position: 47-411
Cow position: chrX:31489214-31489570 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 262
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 59, 80

Conread position: 47-411
Cow position: chrX:31949229-31948885 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 260
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 59, 77

Conread position: 47-411
Cow position: chrX:32743240-32743588 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 247
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 106, 57

Conread position: 47-411
Cow position: chrX:34401700-34402050 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 22

Conread position: 47-411
Cow position: chrX:34532233-34532570 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 61

Conread position: 47-411
Cow position: chrX:35273046-35273413 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 80

Conread position: 47-411
Cow position: chrX:38963813-38964158 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 258
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 18, 52

Conread position: 47-411
Cow position: chrX:45430316-45429972 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 243
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 101, 59

Conread position: 47-414
Cow position: chrX:6413748-6414100 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 61

Conread position: 47-415
Cow position: chrX:8899726-8900081 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 47-415
Cow position: chrX:40035769-40035388 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 213

Conread position: 47-418
Cow position: chrX:2147020-2147403 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 243
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 51

Conread position: 47-419
Cow position: chrX:19689914-19690274 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 243
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 288, 43

Conread position: 47-419
Cow position: chrX:28847174-28846834 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 259
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 59, 50

Conread position: 47-419
Cow position: chrX:40269178-40269550 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 47-419
Cow position: chrX:41238661-41238295 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 259
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 201, 59

Conread position: 47-419
Cow position: chrX:41879228-41878871 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 253
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 268, 18

Conread position: 47-420
Cow position: chrX:18695219-18694869 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 47-420
Cow position: chrX:39558665-39558290 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 260
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 59, 129

Conread position: 47-421
Cow position: chrX:7351004-7351359 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 260
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 102, 50

Conread position: 47-421
Cow position: chrX:7718558-7718908 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 266
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 59, 50

Conread position: 47-421
Cow position: chrX:11455367-11454983 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 253
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 69, 119

Conread position: 47-421
Cow position: chrX:11718078-11717724 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 267
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 59, 73

Conread position: 47-421
Cow position: chrX:12249503-12249872 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 264
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 119, 57

Conread position: 47-421
Cow position: chrX:13868399-13868761 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 256
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 179, 50

Conread position: 47-421
Cow position: chrX:23414680-23414309 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 250
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 59, 110

Conread position: 47-421
Cow position: chrX:25337879-25338247 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 258
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 251, 59

Conread position: 47-421
Cow position: chrX:27105960-27106318 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 250
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 59, 77

Conread position: 47-421
Cow position: chrX:30543580-30543225 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 269
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 62, 79

Conread position: 47-421
Cow position: chrX:31443118-31442770 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 265
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 231, 14

Conread position: 47-421
Cow position: chrX:32309803-32310164 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 259
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 224, 57

Conread position: 47-421
Cow position: chrX:34502625-34502979 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 50

Conread position: 47-421
Cow position: chrX:38072065-38071707 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 256
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 107, 42

Conread position: 47-421
Cow position: chrX:40481170-40480810 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 254
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 230, 15

Conread position: 47-422
Cow position: chrX:15007449-15007089 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 260
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 59, 79

Conread position: 47-423
Cow position: chrX:151603-151967 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 258
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 107, 59

Conread position: 47-423
Cow position: chrX:39700920-39701280 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 248
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 73, 50

Conread position: 47-425
Cow position: chrX:7571608-7571968 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 59

Conread position: 47-425
Cow position: chrX:19188638-19188994 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 267
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 59, 79

Conread position: 47-425
Cow position: chrX:26625983-26625608 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 58

Conread position: 47-425
Cow position: chrX:37843422-37843782 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 260
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 227, 59

Conread position: 47-445
Cow position: chrX:42470235-42469860 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 279
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 101, 59

Conread position: 47-446
Cow position: chrX:31250093-31250470 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 274
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 43, 58

Conread position: 47-450
Cow position: chrX:1616349-1615956 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 52

Conread position: 47-450
Cow position: chrX:11082912-11082536 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 276
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 16, 60

Conread position: 47-450
Cow position: chrX:29289278-29289664 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 77

Conread position: 47-453
Cow position: chrX:45501850-45502235 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 51

Conread position: 47-461
Cow position: chrX:35224004-35224391 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 57

Conread position: 47-496
Cow position: chrX:1055691-1055271 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 303
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 85

Conread position: 47-518
Cow position: chrX:33639670-33640107 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 329
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 101, 15

Conread position: 47-520
Cow position: chrX:33855538-33855086 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 15

Conread position: 47-520
Cow position: chrX:46532818-46532361 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 75

Conread position: 48-371
Cow position: chrX:34376656-34376958 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 234
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 32, 62

Conread position: 48-410
Cow position: chrX:41884734-41884363 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 127

Conread position: 48-413
Cow position: chrX:26441077-26440731 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 58

Conread position: 48-520
Cow position: chrX:41790737-41790295 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 317
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 288, 56

Conread position: 49-236
Cow position: chrX:48310676-48310487 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 122

Conread position: 49-259
Cow position: chrX:45420971-45420771 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 101, 57

Conread position: 49-276
Cow position: chrX:10415822-10415612 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 99, 57

Conread position: 49-328
Cow position: chrX:45089141-45089416 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 57, 69

Conread position: 49-333
Cow position: chrX:11725563-11725286 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 184
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 223, 57

Conread position: 49-333
Cow position: chrX:25458933-25458660 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 189
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 223, 57

Conread position: 49-347
Cow position: chrX:41403665-41403966 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 220
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 57, 90

Conread position: 49-347
Cow position: chrX:41410213-41410514 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 220
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 57, 90

Conread position: 49-378
Cow position: chrX:1947017-1946695 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 225
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 104, 57

Conread position: 49-378
Cow position: chrX:6655563-6655247 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 210
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 223, 57

Conread position: 49-378
Cow position: chrX:16289858-16289541 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 216
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 222, 46

Conread position: 49-386
Cow position: chrX:47873637-47873311 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 231
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 105, 58

Conread position: 49-387
Cow position: chrX:10306377-10306701 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 226
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 223, 48

Conread position: 49-401
Cow position: chrX:12115745-12116087 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 237
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 98, 57

Conread position: 49-402
Cow position: chrX:17497800-17498126 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 251
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 57, 77

Conread position: 49-408
Cow position: chrX:4343453-4343800 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 230
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 57, 77

Conread position: 49-408
Cow position: chrX:41198790-41199155 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 261
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 54, 125

Conread position: 49-408
Cow position: chrX:45903882-45904229 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 227
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 99, 57

Conread position: 49-409
Cow position: chrX:14221787-14222124 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 240
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 57, 77

Conread position: 49-409
Cow position: chrX:27516237-27516580 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 252
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 104, 76

Conread position: 49-411
Cow position: chrX:7054031-7053682 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 239
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 57, 52

Conread position: 49-411
Cow position: chrX:22821118-22821468 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 231
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 223, 57

Conread position: 49-411
Cow position: chrX:23572096-23571743 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 235
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 223, 57

Conread position: 49-411
Cow position: chrX:23583262-23583611 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 254
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 57, 77

Conread position: 49-411
Cow position: chrX:24317770-24318113 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 241
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 57, 77

Conread position: 49-411
Cow position: chrX:38094821-38094466 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 260
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 222, 57

Conread position: 49-414
Cow position: chrX:40452509-40452165 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 57

Conread position: 49-417
Cow position: chrX:32419893-32420271 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 270
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 49, 188

Conread position: 49-418
Cow position: chrX:10428244-10428601 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 236
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 104, 35

Conread position: 49-418
Cow position: chrX:42462044-42461687 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 57

Conread position: 49-419
Cow position: chrX:5638464-5638110 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 267
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 57, 39

Conread position: 49-419
Cow position: chrX:26492706-26493065 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 255
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 57, 76

Conread position: 49-420
Cow position: chrX:20742690-20743048 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 240
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 104, 57

Conread position: 49-420
Cow position: chrX:22888362-22888719 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 239
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 57, 78

Conread position: 49-420
Cow position: chrX:42459876-42460243 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 245
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 57, 68

Conread position: 49-421
Cow position: chrX:34543467-34543843 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 268
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 57, 131

Conread position: 49-434
Cow position: chrX:36778109-36778480 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 261
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 50, 78

Conread position: 49-517
Cow position: chrX:27442848-27442409 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 318
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 57, 48

Conread position: 49-518
Cow position: chrX:34754488-34754044 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 57

Conread position: 50-333
Cow position: chrX:32584108-32583836 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 186
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 230, 56

Conread position: 50-371
Cow position: chrX:35240569-35240881 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 211
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 222, 56

Conread position: 50-378
Cow position: chrX:9096372-9096687 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 216
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 222, 56

Conread position: 50-379
Cow position: chrX:37133829-37133511 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 213
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 222, 56

Conread position: 50-411
Cow position: chrX:23299659-23300008 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 229
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 222, 56

Conread position: 50-411
Cow position: chrX:24105331-24105674 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 247
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 56, 76

Conread position: 50-417
Cow position: chrX:40544905-40544554 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 246
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 201, 56

Conread position: 50-421
Cow position: chrX:23264732-23264374 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 240
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 222, 56

Conread position: 50-427
Cow position: chrX:4905284-4904928 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 244
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 222, 56

Conread position: 50-430
Cow position: chrX:7178617-7178963 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 264
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 221, 47

Conread position: 50-439
Cow position: chrX:14162896-14163268 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 251
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 222, 56

Conread position: 50-518
Cow position: chrX:38218423-38218848 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 324
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 212, 54

Conread position: 52-423
Cow position: chrX:47211143-47210783 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 239
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 112, 53

Conread position: 52-445
Cow position: chrX:4269360-4268983 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 278
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 54, 36

Conread position: 53-311
Cow position: chrX:6607117-6607366 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 63, 53

Conread position: 53-311
Cow position: chrX:20653101-20653351 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 178
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 115, 53

Conread position: 53-333
Cow position: chrX:26531666-26531935 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 185
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 225, 53

Conread position: 53-344
Cow position: chrX:30162705-30162981 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 53, 71

Conread position: 53-362
Cow position: chrX:11806308-11806012 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 221
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 97, 9

Conread position: 53-411
Cow position: chrX:5017698-5017361 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 244
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 278, 53

Conread position: 53-411
Cow position: chrX:34238429-34238769 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 244
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 278, 49

Conread position: 53-411
Cow position: chrX:35681043-35681392 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 255
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 53, 60

Conread position: 53-418
Cow position: chrX:22772363-22772717 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 236
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 91, 41

Conread position: 53-421
Cow position: chrX:1810453-1810101 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 244
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 194, 53

Conread position: 53-421
Cow position: chrX:11589903-11589529 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 265
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 43, 20

Conread position: 53-421
Cow position: chrX:30133616-30133259 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 261
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 53, 72

Conread position: 53-434
Cow position: chrX:12309680-12309315 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 42

Conread position: 53-456
Cow position: chrX:25237886-25238260 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 275
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 210, 53

Conread position: 53-521
Cow position: chrX:22482981-22482556 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 53

Conread position: 54-356
Cow position: chrX:35041931-35042222 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 213
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 52, 41

Conread position: 54-419
Cow position: chrX:5872025-5872376 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 52, 43

Conread position: 55-283
Cow position: chrX:2524020-2523803 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 205, 50

Conread position: 55-311
Cow position: chrX:35268600-35268832 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 182
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 51, 71

Conread position: 55-386
Cow position: chrX:44835106-44834780 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 225
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 51, 71

Conread position: 55-411
Cow position: chrX:7695473-7695801 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 249
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 223, 44

Conread position: 55-421
Cow position: chrX:20801488-20801828 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 240
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 98, 42

Conread position: 55-452
Cow position: chrX:754668-755050 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 268
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 217, 50

Conread position: 56-402
Cow position: chrX:39546262-39545934 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 233
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 223, 51

Conread position: 58-384
Cow position: chrX:48195328-48195012 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 229
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 49, 68

Conread position: 59-386
Cow position: chrX:46723027-46722709 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 236
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 89, 47

Conread position: 59-413
Cow position: chrX:8796964-8797308 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 40

Conread position: 59-421
Cow position: chrX:46033004-46032668 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 250
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 47, 65

Conread position: 62-347
Cow position: chrX:35388190-35387915 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 63

Conread position: 62-400
Cow position: chrX:2467597-2467921 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 84, 44

Conread position: 63-421
Cow position: chrX:16762490-16762830 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 251
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 103, 41

Conread position: 64-411
Cow position: chrX:42874697-42875033 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 42

Conread position: 65-378
Cow position: chrX:28097845-28098132 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 217
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 270, 44

Conread position: 65-433
Cow position: chrX:8730799-8731167 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 254
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 89, 41

Conread position: 65-445
Cow position: chrX:34554450-34554804 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 254
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 41, 61

Conread position: 68-377
Cow position: chrX:30921908-30922205 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 217
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 78, 29

Conread position: 68-410
Cow position: chrX:28105645-28105967 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 231
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 267, 38

Conread position: 73-479
Cow position: chrX:488218-488597 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 273
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 224, 33

Conread position: 79-363
Cow position: chrX:40183616-40183338 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 205
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 27, 48

Conread position: 79-401
Cow position: chrX:47144816-47145125 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 225
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 27, 46

Conread position: 79-411
Cow position: chrX:12018009-12018342 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 239
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 27, 48

Conread position: 81-425
Cow position: chrX:17662872-17662532 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 86

Conread position: 83-402
Cow position: chrX:47757206-47756887 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 221
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 12, 19

Conread position: 85-410
Cow position: chrX:33493503-33493828 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 82

Conread position: 85-421
Cow position: chrX:27394284-27393967 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 230
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 250, 10

Conread position: 92-419
Cow position: chrX:27432182-27431859 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 23

Conread position: 96-421
Cow position: chrX:8517616-8517931 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 219
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 241, 65

Conread position: 99-328
Cow position: chrX:877279-877061 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 103-446
Cow position: chrX:38852942-38853279 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 237
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 6, 28

Conread position: 105-313
Cow position: chrX:6639875-6640082 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 60, 9

Conread position: 106-333
Cow position: chrX:19930407-19930623 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 106-411
Cow position: chrX:9635431-9635140 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 213
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 45, 61

Conread position: 106-414
Cow position: chrX:43567687-43567972 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 215
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 63

Conread position: 106-445
Cow position: chrX:27680151-27680479 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 241
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 10, 49

Conread position: 108-340
Cow position: chrX:25411592-25411821 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 110, 48

Conread position: 108-362
Cow position: chrX:46315628-46315374 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 172
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 24, 32

Conread position: 108-421
Cow position: chrX:17964771-17964463 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 210
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 11, 55

Conread position: 110-445
Cow position: chrX:48800290-48800619 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 223
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 11, 25

Conread position: 113-330
Cow position: chrX:40116182-40116390 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 114-340
Cow position: chrX:19019353-19019126 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 22

Conread position: 115-387
Cow position: chrX:15814856-15815110 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 188
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 33, 49

Conread position: 116-435
Cow position: chrX:47191639-47191333 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 221
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 32, 51

Conread position: 117-402
Cow position: chrX:35542652-35542936 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 50

Conread position: 119-308
Cow position: chrX:15596801-15596991 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 157, 44

Conread position: 119-363
Cow position: chrX:30963109-30962870 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 33, 49

Conread position: 120-313
Cow position: chrX:30421175-30420977 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 92, 43

Conread position: 120-331
Cow position: chrX:44731358-44731568 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 24

Conread position: 120-344
Cow position: chrX:41673866-41674094 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 10, 48

Conread position: 120-371
Cow position: chrX:32020358-32020106 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 28, 47

Conread position: 120-372
Cow position: chrX:2648586-2648343 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 167
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 217, 47

Conread position: 120-386
Cow position: chrX:23497899-23497642 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 215, 32

Conread position: 120-386
Cow position: chrX:48652963-48652696 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 181
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 154, 44

Conread position: 120-402
Cow position: chrX:37119363-37119637 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 194
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 44

Conread position: 120-402
Cow position: chrX:40647742-40648027 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 209
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 102, 46

Conread position: 120-409
Cow position: chrX:678804-678507 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 213
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 26, 47

Conread position: 120-411
Cow position: chrX:8925467-8925749 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 198
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 46, 105

Conread position: 120-411
Cow position: chrX:17888642-17888369 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 203
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 33, 47

Conread position: 120-411
Cow position: chrX:28878398-28878124 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 204
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 24, 50

Conread position: 120-413
Cow position: chrX:11939160-11938883 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 212
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 215, 24

Conread position: 120-414
Cow position: chrX:6690484-6690207 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 34, 44

Conread position: 120-420
Cow position: chrX:20697844-20697551 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 216
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 33, 47

Conread position: 120-421
Cow position: chrX:14599297-14599596 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 215
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 215, 16

Conread position: 120-421
Cow position: chrX:20677129-20677425 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 213
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 34, 16

Conread position: 120-421
Cow position: chrX:25035623-25035323 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 211
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 150, 46

Conread position: 120-421
Cow position: chrX:41167200-41166903 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 158, 46

Conread position: 120-421
Cow position: chrX:42171535-42171235 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 46

Conread position: 120-423
Cow position: chrX:45404070-45403766 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 207
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 26, 47

Conread position: 120-445
Cow position: chrX:24366065-24365740 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 227
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 110, 18

Conread position: 120-446
Cow position: chrX:27772192-27771881 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 226
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 36, 0

Conread position: 120-455
Cow position: chrX:17541728-17542051 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 229
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 217, 46

Conread position: 120-516
Cow position: chrX:9416929-9416554 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 265
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 33, 0

Conread position: 120-521
Cow position: chrX:17794749-17795116 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 280
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 28, 47

Conread position: 121-353
Cow position: chrX:27514633-27514862 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 27, 46

Conread position: 121-397
Cow position: chrX:9997568-9997298 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 198
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 214, 45

Conread position: 121-410
Cow position: chrX:3654369-3654657 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 193
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 31, 44

Conread position: 121-411
Cow position: chrX:37836351-37836636 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 215
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 27, 48

Conread position: 121-415
Cow position: chrX:15139780-15139493 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 199
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 214, 32

Conread position: 121-415
Cow position: chrX:35288425-35288712 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 201
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 46

Conread position: 121-421
Cow position: chrX:27509255-27508963 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 214
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 27, 46

Conread position: 122-367
Cow position: chrX:42282202-42282435 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 212, 21

Conread position: 122-385
Cow position: chrX:11561920-11562178 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 182
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 159, 31

Conread position: 122-386
Cow position: chrX:48010360-48010629 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 189
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 27, 45

Conread position: 122-391
Cow position: chrX:44053024-44053290 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 184
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 31, 45

Conread position: 122-407
Cow position: chrX:14973966-14973696 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 195
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 54, 24

Conread position: 122-411
Cow position: chrX:17631036-17630753 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 194
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 212, 44

Conread position: 122-439
Cow position: chrX:13382090-13382411 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 222
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 157, 0

Conread position: 123-333
Cow position: chrX:46430095-46429888 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 15, 48

Conread position: 123-421
Cow position: chrX:22821814-22822105 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 27, 42

Conread position: 124-402
Cow position: chrX:15996922-15997204 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 188
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 82, 37

Conread position: 125-349
Cow position: chrX:36283114-36283341 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 146, 30

Conread position: 125-373
Cow position: chrX:42339167-42338937 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 28, 42

Conread position: 125-385
Cow position: chrX:36975718-36975976 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 184
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 19, 42

Conread position: 125-401
Cow position: chrX:17231503-17231775 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 193
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 23, 42

Conread position: 125-406
Cow position: chrX:46044813-46045090 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 186
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 29, 43

Conread position: 125-409
Cow position: chrX:45174613-45174898 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 195
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 28, 38

Conread position: 125-409
Cow position: chrX:45598835-45598555 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 19, 43

Conread position: 125-411
Cow position: chrX:26876112-26875831 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 41

Conread position: 125-411
Cow position: chrX:37138205-37137933 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 191
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 212, 41

Conread position: 125-411
Cow position: chrX:38642029-38642299 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 206
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 161, 19

Conread position: 125-421
Cow position: chrX:6278737-6278439 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 42

Conread position: 125-423
Cow position: chrX:38549217-38549506 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 218
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 28, 41

Conread position: 125-425
Cow position: chrX:9201316-9201611 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 213
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 209, 41

Conread position: 125-429
Cow position: chrX:24132382-24132084 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 198
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 25, 38

Conread position: 125-438
Cow position: chrX:14900952-14900649 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 216
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 206, 38

Conread position: 125-455
Cow position: chrX:46587588-46587911 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 221
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 156, 22

Conread position: 125-462
Cow position: chrX:44961516-44961849 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 227
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 23, 36

Conread position: 125-521
Cow position: chrX:20151619-20151991 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 271
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 26, 43

Conread position: 126-332
Cow position: chrX:10252412-10252210 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 20, 42

Conread position: 126-396
Cow position: chrX:37048811-37048546 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 25, 40

Conread position: 126-409
Cow position: chrX:42381330-42381064 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 206
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 27, 41

Conread position: 126-411
Cow position: chrX:7721754-7722042 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 205
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 22, 41

Conread position: 126-421
Cow position: chrX:42247414-42247123 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 217
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 27, 41

Conread position: 126-445
Cow position: chrX:21672321-21672641 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 35

Conread position: 127-328
Cow position: chrX:16541905-16541704 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 144, 26

Conread position: 127-347
Cow position: chrX:7513287-7513497 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 208, 29

Conread position: 127-402
Cow position: chrX:28836133-28835861 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 188
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 42, 26

Conread position: 127-409
Cow position: chrX:17725749-17726023 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 29

Conread position: 127-411
Cow position: chrX:20709842-20710124 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 194
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 26, 37

Conread position: 127-411
Cow position: chrX:39938746-39938473 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 151, 19

Conread position: 127-425
Cow position: chrX:13265849-13265568 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 204
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 26, 40

Conread position: 127-432
Cow position: chrX:40788975-40789283 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 205
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 26, 40

Conread position: 127-434
Cow position: chrX:21664952-21664645 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 206
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 144, 35

Conread position: 128-411
Cow position: chrX:10959629-10959345 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 186
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 41, 7

Conread position: 129-371
Cow position: chrX:21642705-21642466 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 152, 37

Conread position: 130-393
Cow position: chrX:4750524-4750271 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 206, 23

Conread position: 130-401
Cow position: chrX:29509670-29509398 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 201
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 18, 37

Conread position: 130-407
Cow position: chrX:43049116-43049389 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 35, 219

Conread position: 131-333
Cow position: chrX:4942975-4942784 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 17, 36

Conread position: 131-399
Cow position: chrX:47249013-47248746 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 180
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 111

Conread position: 131-411
Cow position: chrX:619233-618952 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 36

Conread position: 131-411
Cow position: chrX:8070925-8070649 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 192
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 141, 25

Conread position: 131-411
Cow position: chrX:11856204-11856480 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 196
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 22, 36

Conread position: 131-411
Cow position: chrX:22074575-22074846 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 209
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 22, 36

Conread position: 131-413
Cow position: chrX:23970164-23970431 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 198
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 204, 35

Conread position: 131-421
Cow position: chrX:9041454-9041185 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 234, 36

Conread position: 131-425
Cow position: chrX:16416283-16416572 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 204
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 200, 13

Conread position: 132-344
Cow position: chrX:17042466-17042677 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 34

Conread position: 132-421
Cow position: chrX:18651266-18650982 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 190
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 214, 37

Conread position: 132-434
Cow position: chrX:10437889-10437594 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 179
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 35

Conread position: 133-412
Cow position: chrX:13177688-13177425 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 203, 28

Conread position: 136-410
Cow position: chrX:1503119-1503387 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 194
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 198, 30

Conread position: 136-421
Cow position: chrX:46073042-46072758 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 206
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 30, 17

Conread position: 136-445
Cow position: chrX:29602053-29601747 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 28

Conread position: 136-455
Cow position: chrX:37574636-37574929 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 230
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 16, 31

Conread position: 137-411
Cow position: chrX:20792037-20791765 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 188
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 16, 32

Conread position: 138-415
Cow position: chrX:41526741-41526469 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 194
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 200, 28

Conread position: 139-411
Cow position: chrX:37910235-37910495 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 197
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 13, 25

Conread position: 139-421
Cow position: chrX:29120841-29121106 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 196
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 192, 14

Conread position: 142-444
Cow position: chrX:9425955-9425661 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 208
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 288, 24

Conread position: 143-434
Cow position: chrX:31340492-31340786 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 196
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 156, 19

Conread position: 146-282
Cow position: chrX:23017793-23017926 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 146-340
Cow position: chrX:27174785-27174977 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 132, 18

Conread position: 147-409
Cow position: chrX:12980039-12979786 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 196
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 188, 19

Conread position: 147-409
Cow position: chrX:34411631-34411894 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 20

Conread position: 147-410
Cow position: chrX:29542427-29542168 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 19

Conread position: 147-411
Cow position: chrX:47046728-47046459 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 183
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 66, 15

Conread position: 147-414
Cow position: chrX:48236603-48236868 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 59, 20

Conread position: 147-423
Cow position: chrX:6234657-6234390 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 131, 19

Conread position: 147-514
Cow position: chrX:40567391-40567749 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 259
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 131, 16

Conread position: 148-399
Cow position: chrX:26285772-26286019 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 175
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 122, 18

Conread position: 148-422
Cow position: chrX:44396807-44397075 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 78, 18

Conread position: 148-442
Cow position: chrX:3579737-3580022 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 127, 22

Conread position: 149-409
Cow position: chrX:36961428-36961689 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 189
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 122, 15

Conread position: 149-410
Cow position: chrX:45993006-45993277 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 16, 111

Conread position: 151-379
Cow position: chrX:31256657-31256885 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 12, 101

Conread position: 152-394
Cow position: chrX:17908487-17908255 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 182, 14

Conread position: 154-386
Cow position: chrX:47301105-47300878 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 13, 25

Conread position: 156-402
Cow position: chrX:37781320-37781068 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 160-411
Cow position: chrX:33000705-33000955 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 181
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 5, 95

Conread position: 161-411
Cow position: chrX:157973-157722 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 168
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 130, 81

Conread position: 161-448
Cow position: chrX:1176180-1175898 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 196
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 5, 172

Conread position: 162-353
Cow position: chrX:37540929-37541117 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 114, 72

Conread position: 164-357
Cow position: chrX:4091454-4091645 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 116, 49

Conread position: 166-421
Cow position: chrX:11633487-11633741 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 101, 56

Conread position: 167-333
Cow position: chrX:23785463-23785635 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 104, 0

Conread position: 167-374
Cow position: chrX:44657155-44656943 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 97, 78

Conread position: 167-387
Cow position: chrX:45874808-45875024 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 153
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 98, 54

Conread position: 167-411
Cow position: chrX:31311835-31312079 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 148

Conread position: 167-421
Cow position: chrX:45110465-45110715 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 168, 92

Conread position: 167-425
Cow position: chrX:43730405-43730161 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 168, 74

Conread position: 168-317
Cow position: chrX:24149450-24149597 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 168-370
Cow position: chrX:1505523-1505720 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 96, 24

Conread position: 168-394
Cow position: chrX:30833035-30832819 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 171, 74

Conread position: 177-410
Cow position: chrX:36067839-36068064 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 183
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 160, 53

Conread position: 177-411
Cow position: chrX:8869589-8869352 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 25, 100

Conread position: 177-437
Cow position: chrX:25713613-25713872 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 178
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 169, 117

Conread position: 178-411
Cow position: chrX:22387428-22387196 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 7, 171

Conread position: 183-409
Cow position: chrX:9770859-9770630 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 52, 166

Conread position: 184-386
Cow position: chrX:36060978-36061185 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 184-386
Cow position: chrX:47303053-47302852 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 146, 94

Conread position: 184-408
Cow position: chrX:45845922-45846148 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 151, 217

Conread position: 184-419
Cow position: chrX:42235707-42235465 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 27, 67

Conread position: 185-384
Cow position: chrX:47484444-47484241 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 86, 0

Conread position: 185-401
Cow position: chrX:37750426-37750214 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 150, 60

Conread position: 185-411
Cow position: chrX:31252245-31252467 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 173
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 150, 22

Conread position: 188-411
Cow position: chrX:22921144-22921371 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 156
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 88, 18

Conread position: 188-411
Cow position: chrX:34792480-34792261 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 59

Conread position: 188-411
Cow position: chrX:48044369-48044149 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 27, 136

Conread position: 188-413
Cow position: chrX:4398956-4399176 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 171, 125

Conread position: 188-419
Cow position: chrX:32820859-32821087 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 83, 47

Conread position: 189-397
Cow position: chrX:14003813-14003610 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 146, 163

Conread position: 190-417
Cow position: chrX:24288100-24287874 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 58, 92

Conread position: 191-331
Cow position: chrX:27145457-27145593 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 115
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 41, 0

Conread position: 191-445
Cow position: chrX:8917226-8917475 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 167
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 142

Conread position: 192-411
Cow position: chrX:14275901-14275693 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 144, 17

Conread position: 192-411
Cow position: chrX:48385529-48385315 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 80, 159

Conread position: 192-445
Cow position: chrX:41992207-41991966 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 185
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 79, 23

Conread position: 194-421
Cow position: chrX:18515237-18515463 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 57, 70

Conread position: 206-401
Cow position: chrX:36723246-36723049 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 73, 154

Conread position: 207-417
Cow position: chrX:5118656-5118446 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 168
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 130, 120

Conread position: 208-445
Cow position: chrX:12405540-12405300 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 68, 211

Conread position: 211-396
Cow position: chrX:45759242-45759421 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 13, 26

Conread position: 211-415
Cow position: chrX:34270251-34270456 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 140
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 67, 123

Conread position: 212-348
Cow position: chrX:10366375-10366238 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 123, 0

Conread position: 213-411
Cow position: chrX:27227974-27228176 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 5, 141

Conread position: 213-421
Cow position: chrX:29680409-29680202 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 5, 136

Conread position: 213-435
Cow position: chrX:36355966-36356187 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 5, 96

Conread position: 213-520
Cow position: chrX:20584174-20584462 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 232
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 21, 145

Conread position: 214-410
Cow position: chrX:38066597-38066406 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 147, 84

Conread position: 216-411
Cow position: chrX:45976774-45976976 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 216-421
Cow position: chrX:39126186-39126385 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 16, 64

Conread position: 217-384
Cow position: chrX:34313889-34314054 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 118, 39

Conread position: 217-394
Cow position: chrX:21986436-21986257 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 118, 0

Conread position: 217-421
Cow position: chrX:11085201-11085004 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 116

Conread position: 217-427
Cow position: chrX:30263108-30263317 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 61, 144

Conread position: 217-486
Cow position: chrX:32215053-32215328 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 192
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 55, 107

Conread position: 218-411
Cow position: chrX:616405-616209 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 155
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 117, 0

Conread position: 218-420
Cow position: chrX:11614556-11614756 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 46, 131

Conread position: 218-514
Cow position: chrX:19273867-19273579 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 212
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 9, 124

Conread position: 218-517
Cow position: chrX:37955689-37955978 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 198
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 6, 95

Conread position: 220-411
Cow position: chrX:41027016-41027209 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 114, 55

Conread position: 222-411
Cow position: chrX:27685108-27685298 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 43, 133

Conread position: 222-411
Cow position: chrX:48243600-48243416 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 114, 69

Conread position: 222-421
Cow position: chrX:21566263-21566466 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 60, 196

Conread position: 222-452
Cow position: chrX:9365813-9365588 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 156
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 224-420
Cow position: chrX:5679700-5679511 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 55, 19

Conread position: 226-402
Cow position: chrX:48014306-48014476 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 108, 17

Conread position: 226-411
Cow position: chrX:41870938-41871117 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 111, 73

Conread position: 226-419
Cow position: chrX:7710678-7710480 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 131

Conread position: 229-411
Cow position: chrX:40685463-40685278 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 105, 0

Conread position: 230-409
Cow position: chrX:34505178-34505001 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 105, 76

Conread position: 231-411
Cow position: chrX:43115021-43115201 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 29, 105

Conread position: 234-411
Cow position: chrX:19003173-19003347 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 96, 111

Conread position: 245-409
Cow position: chrX:26881684-26881517 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 90, 0

Conread position: 249-420
Cow position: chrX:42927931-42927766 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 86, 103

Conread position: 250-386
Cow position: chrX:48571106-48570963 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 269-411
Cow position: chrX:1466069-1466212 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 269-517
Cow position: chrX:45648781-45649013 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 172
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 68, 44

Conread position: 270-411
Cow position: chrX:29050156-29050300 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 270-519
Cow position: chrX:918818-918583 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 182
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 65, 134

Conread position: 280-408
Cow position: chrX:18273139-18273006 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 281-420
Cow position: chrX:36514974-36514835 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 50, 133

Conread position: 291-411
Cow position: chrX:4153105-4152981 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 299-420
Cow position: chrX:5677954-5677832 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 307-410
Cow position: chrX:35985764-35985869 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 342-520
Cow position: chrX:24633665-24633829 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 428-520
Cow position: chrX:11656124-11656215 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 428-520
Cow position: chrX:13177433-13177342 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 428-520
Cow position: chrX:27668915-27668824 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 79
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 12, 0

Show alignments to all cow chromosomes.