Cow genome map

Conread name: rthg23_c7.y1

Conread position: 4-193
Cow position:
Alignm length: 197
Alignm identity: 142
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 10, 162

Conread position: 11-181
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 12, 22

Conread position: 11-190
Cow position:
Alignm length: 183
Alignm identity: 130
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 29, 141

Conread position: 11-190
Cow position:
Alignm length: 185
Alignm identity: 137
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 21, 143

Conread position: 11-191
Cow position:
Alignm length: 188
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 22, 145

Conread position: 11-192
Cow position:
Alignm length: 188
Alignm identity: 137
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 22, 144

Conread position: 11-193
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 144

Conread position: 11-193
Cow position:
Alignm length: 189
Alignm identity: 136
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 22, 144

Conread position: 11-193
Cow position:
Alignm length: 189
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 154

Conread position: 11-193
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 154

Conread position: 11-193
Cow position:
Alignm length: 189
Alignm identity: 136
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 22, 144

Conread position: 11-193
Cow position:
Alignm length: 189
Alignm identity: 135
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 22, 144

Conread position: 11-193
Cow position:
Alignm length: 189
Alignm identity: 137
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 22, 144

Conread position: 11-193
Cow position:
Alignm length: 189
Alignm identity: 137
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 22, 154

Conread position: 11-193
Cow position:
Alignm length: 189
Alignm identity: 145
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 20, 144

Conread position: 11-193
Cow position:
Alignm length: 189
Alignm identity: 135
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 22, 144

Conread position: 11-193
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 22, 144

Conread position: 11-202
Cow position:
Alignm length: 198
Alignm identity: 142
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 20, 144

Conread position: 11-202
Cow position:
Alignm length: 198
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 19, 144

Conread position: 11-550
Cow position:
Alignm length: 586
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 151

Conread position: 19-190
Cow position:
Alignm length: 174
Alignm identity: 130
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 30, 10

Conread position: 21-193
Cow position:
Alignm length: 175
Alignm identity: 127
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 28, 8

Conread position: 25-192
Cow position:
Alignm length: 170
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 7

Conread position: 25-196
Cow position:
Alignm length: 176
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 7

Conread position: 28-193
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 28-193
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 21, 123

Conread position: 28-193
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 21, 123

Conread position: 28-193
Cow position:
Alignm length: 166
Alignm identity: 121
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 127, 0

Conread position: 28-193
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 21, 123

Conread position: 28-193
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 21, 123

Conread position: 28-193
Cow position:
Alignm length: 168
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 28-193
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 29-191
Cow position:
Alignm length: 165
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 122

Conread position: 48-193
Cow position:
Alignm length: 146
Alignm identity: 109
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 48-193
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 101, 0

Conread position: 48-266
Cow position:
Alignm length: 226
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 127, 38

Conread position: 60-201
Cow position:
Alignm length: 142
Alignm identity: 105
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 94-511
Cow position:
Alignm length: 453
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 65

Conread position: 165-582
Cow position:
Alignm length: 444
Alignm identity: 305
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 165, 11

Conread position: 178-532
Cow position:
Alignm length: 377
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 352

Conread position: 180-532
Cow position:
Alignm length: 376
Alignm identity: 257
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 150, 39

Conread position: 188-513
Cow position:
Alignm length: 345
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 53

Conread position: 188-517
Cow position:
Alignm length: 351
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 60

Conread position: 188-521
Cow position:
Alignm length: 356
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 120

Conread position: 188-534
Cow position:
Alignm length: 370
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 207

Conread position: 188-534
Cow position:
Alignm length: 370
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 86

Conread position: 188-536
Cow position:
Alignm length: 377
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 347

Conread position: 188-538
Cow position:
Alignm length: 377
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 88

Conread position: 188-539
Cow position:
Alignm length: 374
Alignm identity: 253
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 11, 40

Conread position: 188-547
Cow position:
Alignm length: 385
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 345

Conread position: 188-550
Cow position:
Alignm length: 389
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 346

Conread position: 188-550
Cow position:
Alignm length: 389
Alignm identity: 266
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 11, 119

Conread position: 188-550
Cow position:
Alignm length: 396
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 74

Conread position: 188-550
Cow position:
Alignm length: 387
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 85

Conread position: 193-536
Cow position:
Alignm length: 362
Alignm identity: 253
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 139, 34

Conread position: 197-547
Cow position:
Alignm length: 374
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 13

Conread position: 198-533
Cow position:
Alignm length: 358
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 158

Conread position: 198-534
Cow position:
Alignm length: 353
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 326

Conread position: 198-547
Cow position:
Alignm length: 374
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 43

Conread position: 198-550
Cow position:
Alignm length: 379
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 44

Conread position: 198-550
Cow position:
Alignm length: 364
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 158

Conread position: 198-550
Cow position:
Alignm length: 377
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 215

Conread position: 198-550
Cow position:
Alignm length: 377
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 334

Conread position: 198-550
Cow position:
Alignm length: 372
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 203

Conread position: 198-550
Cow position:
Alignm length: 380
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 337

Conread position: 198-550
Cow position:
Alignm length: 377
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 334

Conread position: 198-550
Cow position:
Alignm length: 374
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 35

Conread position: 198-582
Cow position:
Alignm length: 405
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 17

Conread position: 200-513
Cow position:
Alignm length: 345
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 10

Conread position: 200-516
Cow position:
Alignm length: 330
Alignm identity: 224
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 75

Conread position: 200-534
Cow position:
Alignm length: 357
Alignm identity: 242
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 74, 83

Conread position: 200-547
Cow position:
Alignm length: 371
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 39

Conread position: 200-550
Cow position:
Alignm length: 371
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 157

Conread position: 204-521
Cow position:
Alignm length: 338
Alignm identity: 230
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 122, 144

Conread position: 204-534
Cow position:
Alignm length: 354
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 162

Conread position: 212-521
Cow position:
Alignm length: 334
Alignm identity: 241
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 118, 320

Conread position: 212-536
Cow position:
Alignm length: 346
Alignm identity: 249
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 118, 62

Conread position: 212-546
Cow position:
Alignm length: 353
Alignm identity: 238
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 118, 51

Conread position: 212-550
Cow position:
Alignm length: 362
Alignm identity: 252
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 22, 204

Conread position: 212-550
Cow position:
Alignm length: 364
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 106

Conread position: 212-550
Cow position:
Alignm length: 363
Alignm identity: 256
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 118, 29

Conread position: 212-550
Cow position:
Alignm length: 363
Alignm identity: 251
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 118, 320

Conread position: 212-550
Cow position:
Alignm length: 363
Alignm identity: 254
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 118, 320

Conread position: 212-550
Cow position:
Alignm length: 364
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 29

Conread position: 212-550
Cow position:
Alignm length: 363
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 320

Conread position: 215-517
Cow position:
Alignm length: 326
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 197

Conread position: 215-522
Cow position:
Alignm length: 330
Alignm identity: 237
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 115, 315

Conread position: 215-534
Cow position:
Alignm length: 345
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 176

Conread position: 217-534
Cow position:
Alignm length: 342
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 61

Conread position: 219-536
Cow position:
Alignm length: 343
Alignm identity: 243
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 111, 313

Conread position: 219-550
Cow position:
Alignm length: 348
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 207

Conread position: 230-534
Cow position:
Alignm length: 329
Alignm identity: 239
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 100, 302

Conread position: 230-534
Cow position:
Alignm length: 326
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 66

Conread position: 238-536
Cow position:
Alignm length: 328
Alignm identity: 234
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 30, 80

Conread position: 251-534
Cow position:
Alignm length: 295
Alignm identity: 213
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 46, 131

Conread position: 261-534
Cow position:
Alignm length: 295
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 166

Conread position: 268-536
Cow position:
Alignm length: 294
Alignm identity: 212
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 62, 264

Conread position: 281-547
Cow position:
Alignm length: 280
Alignm identity: 210
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 83, 37

Conread position: 287-534
Cow position:
Alignm length: 266
Alignm identity: 202
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 42, 142

Conread position: 317-534
Cow position:
Alignm length: 229
Alignm identity: 172
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 13, 95

Conread position: 329-534
Cow position:
Alignm length: 230
Alignm identity: 168
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 75, 195

Conread position: 346-499
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 363-517
Cow position:
Alignm length: 169
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 67, 159

Conread position: 371-550
Cow position:
Alignm length: 193
Alignm identity: 147
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 36, 150

Conread position: 372-550
Cow position:
Alignm length: 192
Alignm identity: 143
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 58, 149

Show alignments to all cow chromosomes.