Cow genome map

Conread name: rthg23_c7.y1

Conread position: 11-190
Cow position: chr10:44708710-44708526 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 144

Conread position: 11-193
Cow position: chr10:19512499-19512683 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 141

Conread position: 11-193
Cow position: chr10:19840586-19840773 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 19, 144

Conread position: 11-193
Cow position: chr10:29845742-29845555 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 29, 144

Conread position: 11-196
Cow position: chr10:32701634-32701820 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 29, 131

Conread position: 11-417
Cow position: chr10:8290884-8291301 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 144

Conread position: 11-536
Cow position: chr10:29631865-29631298 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 153

Conread position: 25-193
Cow position: chr10:38344435-38344267 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 24, 7

Conread position: 28-200
Cow position: chr10:2120086-2119917 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 123

Conread position: 28-202
Cow position: chr10:39040381-39040206 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 21, 123

Conread position: 28-224
Cow position: chr10:30684586-30684388 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 21, 133

Conread position: 166-550
Cow position: chr10:21399571-21399170 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 278
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 11, 19

Conread position: 188-517
Cow position: chr10:1665405-1665048 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 253
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 12, 0

Conread position: 188-517
Cow position: chr10:48397970-48397620 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 259
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 11, 77

Conread position: 188-521
Cow position: chr10:20375706-20375353 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 86

Conread position: 188-531
Cow position: chr10:41878049-41878417 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 346

Conread position: 188-534
Cow position: chr10:30684366-30683995 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 29

Conread position: 188-550
Cow position: chr10:7897356-7896969 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 346

Conread position: 188-584
Cow position: chr10:29845518-29845104 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 111

Conread position: 191-550
Cow position: chr10:37771017-37771398 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 340

Conread position: 193-530
Cow position: chr10:42641729-42642064 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 40

Conread position: 198-517
Cow position: chr10:32701866-32702207 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 333

Conread position: 198-550
Cow position: chr10:14334707-14334321 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 345

Conread position: 198-550
Cow position: chr10:57988853-57988481 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 76

Conread position: 198-550
Cow position: chr10:62407640-62407264 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 335

Conread position: 198-581
Cow position: chr10:39040156-39039754 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 62

Conread position: 198-582
Cow position: chr10:21488104-21488503 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 205

Conread position: 199-518
Cow position: chr10:41158592-41158907 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 239
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 131, 19

Conread position: 204-534
Cow position: chr10:38344212-38343860 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 70

Conread position: 211-550
Cow position: chr10:54931043-54930696 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 18

Conread position: 212-532
Cow position: chr10:19840837-19841174 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 29

Conread position: 212-536
Cow position: chr10:47908088-47908434 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 248
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 118, 21

Conread position: 212-549
Cow position: chr10:41568253-41568613 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 320

Conread position: 212-550
Cow position: chr10:14804999-14805359 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 254
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 118, 22

Conread position: 213-517
Cow position: chr10:38849444-38849761 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 67

Conread position: 213-532
Cow position: chr10:44708458-44708116 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 241
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 117, 319

Conread position: 214-584
Cow position: chr10:28946638-28947005 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 272
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 32, 107

Conread position: 215-516
Cow position: chr10:7280947-7280625 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 200

Conread position: 215-517
Cow position: chr10:126443-126769 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 107

Conread position: 219-521
Cow position: chr10:40151093-40150779 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 309

Conread position: 219-534
Cow position: chr10:42111579-42111916 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 251
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 67, 8

Conread position: 220-551
Cow position: chr10:51774045-51773701 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 214

Conread position: 227-550
Cow position: chr10:57501976-57502316 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 247
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 19, 303

Conread position: 234-536
Cow position: chr10:33870459-33870785 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 200
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 96, 298

Conread position: 234-550
Cow position: chr10:22102411-22102750 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 299

Conread position: 242-550
Cow position: chr10:64221219-64220915 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 225
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 113, 33

Conread position: 253-507
Cow position: chr10:31524960-31525226 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 162

Conread position: 275-517
Cow position: chr10:16477977-16478234 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 194
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 55, 126

Conread position: 301-517
Cow position: chr10:47787930-47788160 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 31, 56

Conread position: 328-521
Cow position: chr10:29109697-29109497 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 163
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 94, 0

Conread position: 347-550
Cow position: chr10:68160346-68160124 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 153

Show alignments to all cow chromosomes.