Cow genome map


           Conread name:
           rthg23_c7.y1
        

               Conread position:
               11-190
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               19, 144
               

               Conread position:
               11-193
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               29, 141
               

               Conread position:
               11-193
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               19, 144
               

               Conread position:
               11-193
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               29, 144
               

               Conread position:
               11-196
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               29, 131
               

               Conread position:
               11-417
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 144
               

               Conread position:
               11-536
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 153
               

               Conread position:
               25-193
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               24, 7
               

               Conread position:
               28-200
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               21, 123
               

               Conread position:
               28-202
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               21, 123
               

               Conread position:
               28-224
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               21, 133
               

               Conread position:
               166-550
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               278
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               11, 19
               

               Conread position:
               188-517
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               253
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               188-517
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               259
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               11, 77
               

               Conread position:
               188-521
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 86
               

               Conread position:
               188-531
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 346
               

               Conread position:
               188-534
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 29
               

               Conread position:
               188-550
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 346
               

               Conread position:
               188-584
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 111
               

               Conread position:
               191-550
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 340
               

               Conread position:
               193-530
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 40
               

               Conread position:
               198-517
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 333
               

               Conread position:
               198-550
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 345
               

               Conread position:
               198-550
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 76
               

               Conread position:
               198-550
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 335
               

               Conread position:
               198-581
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 62
               

               Conread position:
               198-582
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 205
               

               Conread position:
               199-518
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               131, 19
               

               Conread position:
               204-534
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 70
               

               Conread position:
               211-550
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 18
               

               Conread position:
               212-532
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 29
               

               Conread position:
               212-536
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               248
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               118, 21
               

               Conread position:
               212-549
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 320
               

               Conread position:
               212-550
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               254
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               118, 22
               

               Conread position:
               213-517
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 67
               

               Conread position:
               213-532
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               117, 319
               

               Conread position:
               214-584
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               272
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               32, 107
               

               Conread position:
               215-516
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 200
               

               Conread position:
               215-517
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 107
               

               Conread position:
               219-521
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 309
               

               Conread position:
               219-534
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               251
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               67, 8
               

               Conread position:
               220-551
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 214
               

               Conread position:
               227-550
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               247
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               19, 303
               

               Conread position:
               234-536
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               96, 298
               

               Conread position:
               234-550
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 299
               

               Conread position:
               242-550
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               225
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               113, 33
               

               Conread position:
               253-507
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 162
               

               Conread position:
               275-517
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               55, 126
               

               Conread position:
               301-517
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               31, 56
               

               Conread position:
               328-521
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               163
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               347-550
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               20, 153
               
Show alignments to all cow chromosomes.