Cow genome map

Conread name: rthg23_c7.y1

Conread position: 1-196
Cow position:
Alignm length: 200
Alignm identity: 146
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 30, 140

Conread position: 11-173
Cow position:
Alignm length: 169
Alignm identity: 125
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 22, 144

Conread position: 11-184
Cow position:
Alignm length: 180
Alignm identity: 138
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 20, 144

Conread position: 11-191
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 136

Conread position: 11-192
Cow position:
Alignm length: 188
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 154

Conread position: 11-192
Cow position:
Alignm length: 188
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 144

Conread position: 11-193
Cow position:
Alignm length: 189
Alignm identity: 134
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 22, 154

Conread position: 11-193
Cow position:
Alignm length: 189
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 144

Conread position: 11-193
Cow position:
Alignm length: 189
Alignm identity: 133
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 22, 144

Conread position: 11-193
Cow position:
Alignm length: 189
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 144

Conread position: 11-193
Cow position:
Alignm length: 186
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 11-534
Cow position:
Alignm length: 559
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 127

Conread position: 13-193
Cow position:
Alignm length: 184
Alignm identity: 133
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 27, 139

Conread position: 13-203
Cow position:
Alignm length: 195
Alignm identity: 144
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 41

Conread position: 13-522
Cow position:
Alignm length: 524
Alignm identity: 329
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 34, 81

Conread position: 14-191
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 18-201
Cow position:
Alignm length: 191
Alignm identity: 142
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 19-193
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 30, 10

Conread position: 23-193
Cow position:
Alignm length: 173
Alignm identity: 129
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 26, 6

Conread position: 28-193
Cow position:
Alignm length: 168
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 21, 123

Conread position: 48-193
Cow position:
Alignm length: 146
Alignm identity: 109
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 101, 0

Conread position: 49-193
Cow position:
Alignm length: 145
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 164-582
Cow position:
Alignm length: 434
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 12

Conread position: 165-510
Cow position:
Alignm length: 364
Alignm identity: 256
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 18, 9

Conread position: 188-509
Cow position:
Alignm length: 337
Alignm identity: 227
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 11, 170

Conread position: 188-534
Cow position:
Alignm length: 369
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 85

Conread position: 188-547
Cow position:
Alignm length: 377
Alignm identity: 269
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 11, 52

Conread position: 188-550
Cow position:
Alignm length: 386
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 124

Conread position: 188-554
Cow position:
Alignm length: 384
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 108

Conread position: 197-533
Cow position:
Alignm length: 351
Alignm identity: 234
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 13, 76

Conread position: 198-534
Cow position:
Alignm length: 354
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 166

Conread position: 198-547
Cow position:
Alignm length: 374
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 221

Conread position: 198-547
Cow position:
Alignm length: 375
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 335

Conread position: 198-550
Cow position:
Alignm length: 377
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 334

Conread position: 198-550
Cow position:
Alignm length: 378
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 335

Conread position: 198-550
Cow position:
Alignm length: 377
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 43

Conread position: 198-550
Cow position:
Alignm length: 380
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 337

Conread position: 198-550
Cow position:
Alignm length: 379
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 76

Conread position: 198-550
Cow position:
Alignm length: 376
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 333

Conread position: 198-550
Cow position:
Alignm length: 375
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 196

Conread position: 198-550
Cow position:
Alignm length: 376
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 220

Conread position: 198-550
Cow position:
Alignm length: 376
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 333

Conread position: 198-584
Cow position:
Alignm length: 412
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 44

Conread position: 204-533
Cow position:
Alignm length: 349
Alignm identity: 231
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 130, 27

Conread position: 204-534
Cow position:
Alignm length: 362
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 335

Conread position: 204-539
Cow position:
Alignm length: 358
Alignm identity: 248
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 54, 123

Conread position: 212-517
Cow position:
Alignm length: 331
Alignm identity: 239
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 115, 77

Conread position: 212-536
Cow position:
Alignm length: 350
Alignm identity: 254
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 118, 59

Conread position: 212-536
Cow position:
Alignm length: 350
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 320

Conread position: 212-536
Cow position:
Alignm length: 349
Alignm identity: 248
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 118, 19

Conread position: 212-547
Cow position:
Alignm length: 361
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 63

Conread position: 212-550
Cow position:
Alignm length: 363
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 320

Conread position: 212-550
Cow position:
Alignm length: 364
Alignm identity: 258
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 115, 104

Conread position: 212-550
Cow position:
Alignm length: 362
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 22

Conread position: 213-532
Cow position:
Alignm length: 344
Alignm identity: 248
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 117, 61

Conread position: 215-540
Cow position:
Alignm length: 350
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 71

Conread position: 215-550
Cow position:
Alignm length: 353
Alignm identity: 254
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 115, 24

Conread position: 216-529
Cow position:
Alignm length: 339
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 58

Conread position: 218-522
Cow position:
Alignm length: 326
Alignm identity: 236
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 112, 311

Conread position: 218-547
Cow position:
Alignm length: 354
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 46

Conread position: 219-583
Cow position:
Alignm length: 372
Alignm identity: 248
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 116, 53

Conread position: 230-534
Cow position:
Alignm length: 332
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 132

Conread position: 233-534
Cow position:
Alignm length: 310
Alignm identity: 224
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 97, 124

Conread position: 280-510
Cow position:
Alignm length: 251
Alignm identity: 188
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 50, 0

Conread position: 287-533
Cow position:
Alignm length: 267
Alignm identity: 193
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 44, 70

Conread position: 301-550
Cow position:
Alignm length: 268
Alignm identity: 193
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 29, 40

Conread position: 363-534
Cow position:
Alignm length: 188
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 45

Conread position: 364-534
Cow position:
Alignm length: 191
Alignm identity: 145
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 34, 7

Conread position: 366-530
Cow position:
Alignm length: 179
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 12

Show alignments to all cow chromosomes.