Cow genome map
| Conread name: | rthg23_c7.y1 |
| Conread position: | 8-193 |
| Cow position: | chr13:34938073-34938263 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 25, 147 |
| Conread position: | 11-190 |
| Cow position: | chr13:5625394-5625208 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 23, 142 |
| Conread position: | 11-190 |
| Cow position: | chr13:34324948-34324763 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 11-192 |
| Cow position: | chr13:35757884-35758070 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 22, 144 |
| Conread position: | 11-193 |
| Cow position: | chr13:3056524-3056337 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 144 |
| Conread position: | 11-193 |
| Cow position: | chr13:4942001-4942183 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 38, 65 |
| Conread position: | 11-193 |
| Cow position: | chr13:9045389-9045567 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 11-193 |
| Cow position: | chr13:32737212-32737025 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 22, 154 |
| Conread position: | 28-180 |
| Cow position: | chr13:34910233-34910083 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 21, 87 |
| Conread position: | 28-190 |
| Cow position: | chr13:6667500-6667338 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 21, 39 |
| Conread position: | 28-193 |
| Cow position: | chr13:15519874-15519708 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 21, 123 |
| Conread position: | 28-193 |
| Cow position: | chr13:15543174-15543339 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 16, 122 |
| Conread position: | 28-193 |
| Cow position: | chr13:15923747-15923581 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 21, 123 |
| Conread position: | 28-193 |
| Cow position: | chr13:20541412-20541247 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 21, 41 |
| Conread position: | 37-193 |
| Cow position: | chr13:30303927-30304082 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 62-193 |
| Cow position: | chr13:43590000-43590130 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 188-534 |
| Cow position: | chr13:30654544-30654190 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 45 |
| Conread position: | 188-536 |
| Cow position: | chr13:15519671-15519318 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 267 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 12, 108 |
| Conread position: | 188-550 |
| Cow position: | chr13:4942219-4942605 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 345 |
| Conread position: | 188-550 |
| Cow position: | chr13:14402262-14401886 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 227 |
| Conread position: | 188-550 |
| Cow position: | chr13:35758118-35758505 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 126 |
| Conread position: | 188-550 |
| Cow position: | chr13:43590167-43590541 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 336 |
| Conread position: | 193-535 |
| Cow position: | chr13:15450277-15449935 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 19 |
| Conread position: | 198-518 |
| Cow position: | chr13:9045617-9045953 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 61 |
| Conread position: | 198-534 |
| Cow position: | chr13:5625141-5624790 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 229 |
| Conread position: | 198-536 |
| Cow position: | chr13:4484642-4484999 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 136 |
| Conread position: | 198-550 |
| Cow position: | chr13:15923532-15923159 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 76 |
| Conread position: | 198-584 |
| Cow position: | chr13:11797872-11797484 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 285 |
| Conread position: | 198-584 |
| Cow position: | chr13:32546237-32546646 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 334 |
| Conread position: | 199-534 |
| Cow position: | chr13:11794194-11793876 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 249 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 131, 28 |
| Conread position: | 199-534 |
| Cow position: | chr13:34030469-34030811 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 102 |
| Conread position: | 204-550 |
| Cow position: | chr13:30239176-30239535 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 67 |
| Conread position: | 211-550 |
| Cow position: | chr13:32984483-32984124 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 318 |
| Conread position: | 212-517 |
| Cow position: | chr13:23002148-23001821 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 319 |
| Conread position: | 212-550 |
| Cow position: | chr13:13325790-13326149 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 68 |
| Conread position: | 212-550 |
| Cow position: | chr13:31733028-31732673 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 96 |
| Conread position: | 212-550 |
| Cow position: | chr13:50110313-50110673 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 118, 172 |
| Conread position: | 212-560 |
| Cow position: | chr13:47229140-47228767 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 322 |
| Conread position: | 215-532 |
| Cow position: | chr13:6667268-6666931 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 200 |
| Conread position: | 222-521 |
| Cow position: | chr13:21839323-21839002 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 231 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 108, 309 |
| Conread position: | 232-550 |
| Cow position: | chr13:34938332-34938661 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 16 |
| Conread position: | 267-550 |
| Cow position: | chr13:31507831-31508130 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 63, 127 |
| Conread position: | 276-550 |
| Cow position: | chr13:34342831-34343126 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 6 |
| Conread position: | 280-531 |
| Cow position: | chr13:28670287-28670032 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 28, 77 |
| Conread position: | 287-517 |
| Cow position: | chr13:34909087-34908843 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 192 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 43, 126 |
| Conread position: | 328-531 |
| Cow position: | chr13:5501020-5500797 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 28, 201 |
| Conread position: | 328-550 |
| Cow position: | chr13:6358102-6358344 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 42, 201 |
| Conread position: | 363-536 |
| Cow position: | chr13:30011796-30011611 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 41, 158 |
Show alignments to all cow chromosomes.