Cow genome map


           Conread name:
           rthg23_c7.y1
        

               Conread position:
               4-193
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               29, 162
               

               Conread position:
               11-193
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               29, 144
               

               Conread position:
               11-193
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               22, 144
               

               Conread position:
               11-193
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               20, 145
               

               Conread position:
               11-193
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               20, 154
               

               Conread position:
               11-193
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               23, 144
               

               Conread position:
               11-193
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               29, 141
               

               Conread position:
               11-193
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               21, 149
               

               Conread position:
               11-193
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               22, 144
               

               Conread position:
               11-200
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               23, 162
               

               Conread position:
               11-201
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               31, 10
               

               Conread position:
               11-207
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               29, 141
               

               Conread position:
               19-193
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               30, 10
               

               Conread position:
               28-188
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               21, 123
               

               Conread position:
               37-192
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               39-189
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               10, 112
               

               Conread position:
               41-184
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               48-190
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               48-192
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               48-193
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               179-536
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               259
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               151, 40
               

               Conread position:
               186-547
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 349
               

               Conread position:
               188-513
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 56
               

               Conread position:
               188-517
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 88
               

               Conread position:
               188-534
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 43
               

               Conread position:
               188-581
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 27
               

               Conread position:
               196-550
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 46
               

               Conread position:
               198-531
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 73
               

               Conread position:
               198-532
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 33
               

               Conread position:
               198-550
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 73
               

               Conread position:
               198-580
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 100
               

               Conread position:
               198-584
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 33
               

               Conread position:
               198-584
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 334
               

               Conread position:
               199-550
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 217
               

               Conread position:
               200-501
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               94, 48
               

               Conread position:
               202-550
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 14
               

               Conread position:
               204-536
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 70
               

               Conread position:
               205-550
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 36
               

               Conread position:
               208-534
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 33
               

               Conread position:
               210-522
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               36, 331
               

               Conread position:
               211-532
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               246
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               49, 74
               

               Conread position:
               211-550
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 24
               

               Conread position:
               212-550
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               118, 13
               

               Conread position:
               212-550
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               252
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               118, 319
               

               Conread position:
               212-550
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 94
               

               Conread position:
               212-550
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               252
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               118, 317
               

               Conread position:
               217-517
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 31
               

               Conread position:
               218-580
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               225-536
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 20
               

               Conread position:
               227-544
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               238
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               103, 119
               

               Conread position:
               230-536
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 302
               

               Conread position:
               240-551
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               90, 295
               

               Conread position:
               242-532
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 283
               

               Conread position:
               243-534
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 253
               

               Conread position:
               251-536
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               237
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               79, 286
               

               Conread position:
               258-545
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               72, 277
               

               Conread position:
               281-541
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               52, 174
               

               Conread position:
               282-550
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               210
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               48, 75
               

               Conread position:
               284-550
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               46, 255
               

               Conread position:
               286-510
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               328-550
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               48, 41
               

               Conread position:
               329-550
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               35, 198
               

               Conread position:
               364-550
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               9, 159
               
Show alignments to all cow chromosomes.