Cow genome map

Conread name: rthg23_c7.y1

Conread position: 11-192
Cow position: chr17:11087005-11086819 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 24, 144

Conread position: 11-193
Cow position: chr17:54737-54554 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 131

Conread position: 11-193
Cow position: chr17:2580339-2580521 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 38, 140

Conread position: 11-193
Cow position: chr17:15324546-15324733 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 20, 144

Conread position: 11-193
Cow position: chr17:15851409-15851591 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 22, 43

Conread position: 11-193
Cow position: chr17:24029287-24029100 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 22, 150

Conread position: 11-193
Cow position: chr17:40805526-40805713 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 144

Conread position: 28-192
Cow position: chr17:1787199-1787034 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 131

Conread position: 28-192
Cow position: chr17:20403160-20403321 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 39-193
Cow position: chr17:3642086-3641931 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 69

Conread position: 188-507
Cow position: chr17:31767100-31766753 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 242
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 11, 0

Conread position: 188-532
Cow position: chr17:14216088-14215719 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 263
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 13, 346

Conread position: 188-534
Cow position: chr17:16121601-16121271 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 75

Conread position: 188-546
Cow position: chr17:20403371-20403740 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 332

Conread position: 188-550
Cow position: chr17:14040103-14039720 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 102

Conread position: 188-550
Cow position: chr17:24783100-24783487 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 274
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 13, 270

Conread position: 188-550
Cow position: chr17:40805750-40806134 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 88

Conread position: 196-550
Cow position: chr17:20080923-20080556 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 77

Conread position: 198-517
Cow position: chr17:19267876-19267535 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 333

Conread position: 198-534
Cow position: chr17:6069506-6069859 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 44

Conread position: 198-534
Cow position: chr17:20099519-20099162 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 12

Conread position: 198-550
Cow position: chr17:2078048-2077669 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 122

Conread position: 198-550
Cow position: chr17:6260812-6261186 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 333

Conread position: 200-525
Cow position: chr17:17067200-17067538 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 240
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 132, 42

Conread position: 200-542
Cow position: chr17:21418534-21418881 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 242
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 130, 41

Conread position: 200-550
Cow position: chr17:4082968-4083344 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 22

Conread position: 204-534
Cow position: chr17:1786981-1786652 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 38

Conread position: 204-539
Cow position: chr17:18194765-18195105 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 44

Conread position: 206-534
Cow position: chr17:239306-239620 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 228
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 196, 57

Conread position: 209-521
Cow position: chr17:22558929-22559266 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 207

Conread position: 211-536
Cow position: chr17:2247117-2246769 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 250
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 21, 53

Conread position: 212-516
Cow position: chr17:43989466-43989796 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 241
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 22, 265

Conread position: 212-536
Cow position: chr17:34157085-34157434 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 249
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 118, 321

Conread position: 212-550
Cow position: chr17:182541-182901 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 252
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 118, 178

Conread position: 212-550
Cow position: chr17:9080456-9080095 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 254
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 118, 320

Conread position: 213-550
Cow position: chr17:33284867-33284520 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 306

Conread position: 214-550
Cow position: chr17:13675322-13674966 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 316

Conread position: 215-534
Cow position: chr17:14240468-14240814 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 321

Conread position: 215-534
Cow position: chr17:15851657-15852002 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 198

Conread position: 217-534
Cow position: chr17:24029032-24028691 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 317

Conread position: 220-534
Cow position: chr17:4941742-4941421 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 236
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 113, 22

Conread position: 228-521
Cow position: chr17:27793797-27793480 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 228
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 102, 0

Conread position: 230-550
Cow position: chr17:20086781-20086444 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 300

Show alignments to all cow chromosomes.