Cow genome map


           Conread name:
           rthg23_c7.y1
        

               Conread position:
               3-192
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               10, 153
               

               Conread position:
               3-193
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               10, 113
               

               Conread position:
               11-190
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               22, 154
               

               Conread position:
               11-192
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               22, 144
               

               Conread position:
               11-192
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               22, 143
               

               Conread position:
               11-193
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               22, 82
               

               Conread position:
               11-193
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               22, 144
               

               Conread position:
               11-193
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               18, 143
               

               Conread position:
               11-193
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               11-193
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               21, 144
               

               Conread position:
               11-230
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               13, 144
               

               Conread position:
               13-201
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               36, 27
               

               Conread position:
               18-184
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               36, 11
               

               Conread position:
               19-192
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 10
               

               Conread position:
               28-191
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               23, 130
               

               Conread position:
               28-193
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               21, 123
               

               Conread position:
               28-193
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               22, 82
               

               Conread position:
               28-202
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               21, 129
               

               Conread position:
               40-193
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               9, 111
               

               Conread position:
               47-550
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 67
               

               Conread position:
               48-153
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               85
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               165-550
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 11
               

               Conread position:
               176-535
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               271
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               6, 21
               

               Conread position:
               187-517
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               147, 44
               

               Conread position:
               188-550
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 202
               

               Conread position:
               190-550
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 51
               

               Conread position:
               191-536
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               34, 73
               

               Conread position:
               197-532
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               137, 75
               

               Conread position:
               198-532
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 80
               

               Conread position:
               198-534
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 337
               

               Conread position:
               198-534
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 44
               

               Conread position:
               198-534
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 66
               

               Conread position:
               198-547
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 62
               

               Conread position:
               198-550
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 41
               

               Conread position:
               198-550
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 43
               

               Conread position:
               199-534
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 333
               

               Conread position:
               200-534
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 87
               

               Conread position:
               204-544
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 327
               

               Conread position:
               204-550
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 317
               

               Conread position:
               206-517
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               218
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               40, 13
               

               Conread position:
               211-539
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 31
               

               Conread position:
               212-550
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 94
               

               Conread position:
               212-550
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               256
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               117, 320
               

               Conread position:
               215-547
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 318
               

               Conread position:
               215-550
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 319
               

               Conread position:
               219-536
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 199
               

               Conread position:
               219-536
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               243
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               110, 313
               

               Conread position:
               232-534
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 39
               

               Conread position:
               233-550
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               94, 83
               

               Conread position:
               233-582
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               261
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               97, 14
               

               Conread position:
               237-531
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 48
               

               Conread position:
               242-537
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 225
               

               Conread position:
               242-550
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               233
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               56, 152
               

               Conread position:
               243-516
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               248-504
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               54, 26
               

               Conread position:
               262-534
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               68, 48
               

               Conread position:
               280-584
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 246
               

               Conread position:
               282-513
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 203
               

               Conread position:
               305-550
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               28, 224
               

               Conread position:
               310-532
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               20, 218
               

               Conread position:
               328-550
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               79, 193
               

               Conread position:
               329-582
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               37, 192
               

               Conread position:
               333-517
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               33, 197
               

               Conread position:
               338-544
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               69, 34
               

               Conread position:
               339-550
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               20, 190
               

               Conread position:
               348-550
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               53, 77
               
Show alignments to all cow chromosomes.