Cow genome map
Conread name: | rthg23_c7.y1 |
Conread position: | 1-196 |
Cow position: | chr21:30071-30271 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 145 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 32, 154 |
Conread position: | 11-166 |
Cow position: | chr21:2417220-2417382 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 122 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 11-180 |
Cow position: | chr21:35144761-35144935 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 128 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 22, 144 |
Conread position: | 11-190 |
Cow position: | chr21:2511845-2512030 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 136 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 19, 34 |
Conread position: | 11-190 |
Cow position: | chr21:13313763-13313943 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 141 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 21, 82 |
Conread position: | 11-191 |
Cow position: | chr21:18817550-18817363 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 138 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 22, 152 |
Conread position: | 11-193 |
Cow position: | chr21:2882734-2882547 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 140 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 22, 154 |
Conread position: | 11-193 |
Cow position: | chr21:5840260-5840073 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 140 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 22, 144 |
Conread position: | 11-193 |
Cow position: | chr21:10567680-10567858 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 131 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 29, 37 |
Conread position: | 11-208 |
Cow position: | chr21:37719016-37718814 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 150 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 21, 142 |
Conread position: | 11-375 |
Cow position: | chr21:4077837-4078194 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 149 |
Conread position: | 17-193 |
Cow position: | chr21:45782496-45782672 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 135 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 29, 12 |
Conread position: | 19-193 |
Cow position: | chr21:40270655-40270484 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 127 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 28-192 |
Cow position: | chr21:146954-147119 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 124 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 21, 123 |
Conread position: | 28-193 |
Cow position: | chr21:360668-360834 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 129 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 21, 118 |
Conread position: | 28-193 |
Cow position: | chr21:3779792-3779958 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 123 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 21, 123 |
Conread position: | 28-193 |
Cow position: | chr21:31515303-31515136 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 125 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 21, 124 |
Conread position: | 28-528 |
Cow position: | chr21:20743555-20743031 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 97 |
Conread position: | 29-192 |
Cow position: | chr21:467894-468054 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 123 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 20, 108 |
Conread position: | 165-550 |
Cow position: | chr21:33253388-33253794 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 11 |
Conread position: | 176-550 |
Cow position: | chr21:1286985-1286602 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 21 |
Conread position: | 188-534 |
Cow position: | chr21:27284694-27285064 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 345 |
Conread position: | 188-534 |
Cow position: | chr21:47942175-47942544 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 55 |
Conread position: | 188-550 |
Cow position: | chr21:147158-147535 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 53 |
Conread position: | 193-550 |
Cow position: | chr21:27566978-27567357 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 192 |
Conread position: | 197-532 |
Cow position: | chr21:2512084-2512442 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 254 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 133, 335 |
Conread position: | 198-509 |
Cow position: | chr21:4564709-4565037 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 232 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 120, 35 |
Conread position: | 198-517 |
Cow position: | chr21:45782722-45783054 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 34 |
Conread position: | 198-536 |
Cow position: | chr21:10851324-10851676 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 120 |
Conread position: | 198-547 |
Cow position: | chr21:28613587-28613936 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 263 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 202, 88 |
Conread position: | 198-550 |
Cow position: | chr21:3780007-3780385 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 337 |
Conread position: | 198-550 |
Cow position: | chr21:4185165-4185530 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 180, 14 |
Conread position: | 198-550 |
Cow position: | chr21:27069723-27069349 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 76 |
Conread position: | 198-550 |
Cow position: | chr21:31515078-31514703 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 334 |
Conread position: | 198-550 |
Cow position: | chr21:47646570-47646946 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 76 |
Conread position: | 200-534 |
Cow position: | chr21:360901-361260 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 263 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 92, 120 |
Conread position: | 204-530 |
Cow position: | chr21:2417460-2417804 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 63 |
Conread position: | 204-550 |
Cow position: | chr21:11506855-11507225 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 258 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 123, 329 |
Conread position: | 211-522 |
Cow position: | chr21:30323-30627 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 264 |
Conread position: | 212-536 |
Cow position: | chr21:42914621-42914963 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 241 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 100, 15 |
Conread position: | 235-534 |
Cow position: | chr21:5018419-5018735 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 237 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 95, 39 |
Conread position: | 244-510 |
Cow position: | chr21:6625807-6626105 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 218 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 347-517 |
Cow position: | chr21:2673574-2673390 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 138 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 20, 60 |
Conread position: | 351-550 |
Cow position: | chr21:13297999-13298206 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 154 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 70, 9 |
Conread position: | 367-550 |
Cow position: | chr21:2880407-2880210 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 147 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 44, 39 |
Conread position: | 399-550 |
Cow position: | chr21:34655287-34655447 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 124 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 34, 118 |
Show alignments to all cow chromosomes.