Cow genome map
| Conread name: | rthg23_c7.y1 |
| Conread position: | 11-191 |
| Cow position: | chr22:18815549-18815364 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 20, 144 |
| Conread position: | 11-192 |
| Cow position: | chr22:559879-559692 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 20, 151 |
| Conread position: | 11-193 |
| Cow position: | chr22:42992011-42992194 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 20, 43 |
| Conread position: | 11-194 |
| Cow position: | chr22:6332542-6332729 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 22, 83 |
| Conread position: | 11-205 |
| Cow position: | chr22:41418483-41418286 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 17, 141 |
| Conread position: | 13-193 |
| Cow position: | chr22:44457888-44458072 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 20, 64 |
| Conread position: | 19-182 |
| Cow position: | chr22:36276465-36276628 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 30, 10 |
| Conread position: | 19-201 |
| Cow position: | chr22:44397290-44397472 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 30, 13 |
| Conread position: | 28-192 |
| Cow position: | chr22:34169191-34169356 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 21, 123 |
| Conread position: | 28-192 |
| Cow position: | chr22:39468668-39468503 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 21, 123 |
| Conread position: | 39-201 |
| Cow position: | chr22:1520160-1519997 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 10, 112 |
| Conread position: | 48-193 |
| Cow position: | chr22:36184632-36184777 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 56, 102 |
| Conread position: | 188-510 |
| Cow position: | chr22:31333992-31333643 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 188-516 |
| Cow position: | chr22:24536816-24537167 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 9, 43 |
| Conread position: | 188-533 |
| Cow position: | chr22:1268706-1268330 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 344 |
| Conread position: | 188-545 |
| Cow position: | chr22:8737275-8736918 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 81 |
| Conread position: | 188-550 |
| Cow position: | chr22:6332765-6333153 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 347 |
| Conread position: | 188-550 |
| Cow position: | chr22:18028343-18028728 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 38 |
| Conread position: | 188-551 |
| Cow position: | chr22:1281671-1281293 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 140 |
| Conread position: | 189-536 |
| Cow position: | chr22:16201985-16202340 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 265 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 11, 127 |
| Conread position: | 196-550 |
| Cow position: | chr22:12730622-12730256 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 226 |
| Conread position: | 198-517 |
| Cow position: | chr22:19142622-19142273 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 259 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 132, 76 |
| Conread position: | 198-534 |
| Cow position: | chr22:17327389-17327034 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 215 |
| Conread position: | 198-534 |
| Cow position: | chr22:18815298-18814941 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 332 |
| Conread position: | 198-534 |
| Cow position: | chr22:36860472-36860124 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 280 |
| Conread position: | 198-547 |
| Cow position: | chr22:8121013-8120651 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 335 |
| Conread position: | 198-550 |
| Cow position: | chr22:559640-559265 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 334 |
| Conread position: | 198-550 |
| Cow position: | chr22:3305510-3305158 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 90 |
| Conread position: | 198-550 |
| Cow position: | chr22:37292597-37292234 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 125 |
| Conread position: | 198-550 |
| Cow position: | chr22:39468451-39468074 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 119 |
| Conread position: | 198-550 |
| Cow position: | chr22:42992241-42992615 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 215 |
| Conread position: | 198-550 |
| Cow position: | chr22:44935037-44935408 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 330 |
| Conread position: | 200-584 |
| Cow position: | chr22:13673735-13673336 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 29, 35 |
| Conread position: | 204-534 |
| Cow position: | chr22:13773608-13773944 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 247 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 50, 29 |
| Conread position: | 204-536 |
| Cow position: | chr22:21195418-21195071 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 320 |
| Conread position: | 205-550 |
| Cow position: | chr22:35906314-35905950 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 35 |
| Conread position: | 211-533 |
| Cow position: | chr22:42429678-42429340 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 221 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 114, 31 |
| Conread position: | 212-510 |
| Cow position: | chr22:6021745-6022065 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 233 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 22, 204 |
| Conread position: | 212-522 |
| Cow position: | chr22:694703-695028 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 235 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 114, 201 |
| Conread position: | 212-532 |
| Cow position: | chr22:1879884-1880226 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 244 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 22, 319 |
| Conread position: | 212-536 |
| Cow position: | chr22:44492134-44492482 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 320 |
| Conread position: | 212-550 |
| Cow position: | chr22:10908753-10908396 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 26 |
| Conread position: | 215-532 |
| Cow position: | chr22:36184844-36185179 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 200 |
| Conread position: | 219-534 |
| Cow position: | chr22:45510453-45510119 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 111, 309 |
| Conread position: | 219-542 |
| Cow position: | chr22:45582012-45582347 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 249 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 28, 41 |
| Conread position: | 233-550 |
| Cow position: | chr22:326087-325745 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 301 |
| Conread position: | 238-536 |
| Cow position: | chr22:24951663-24951984 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 234 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 92, 14 |
| Conread position: | 244-536 |
| Cow position: | chr22:34600461-34600768 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 27 |
| Conread position: | 246-534 |
| Cow position: | chr22:44397548-44397855 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 85, 280 |
| Conread position: | 251-534 |
| Cow position: | chr22:38550512-38550808 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 28 |
| Conread position: | 255-534 |
| Cow position: | chr22:15852540-15852847 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 56, 282 |
| Conread position: | 262-532 |
| Cow position: | chr22:46585434-46585142 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 220 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 68, 269 |
| Conread position: | 278-550 |
| Cow position: | chr22:44368325-44368042 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 49, 40 |
| Conread position: | 282-533 |
| Cow position: | chr22:19243556-19243820 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 52, 14 |
| Conread position: | 336-547 |
| Cow position: | chr22:46614511-46614740 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 31, 43 |
| Conread position: | 373-534 |
| Cow position: | chr22:29012016-29011849 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 6, 143 |
Show alignments to all cow chromosomes.