Cow genome map
| Conread name: | rthg23_c7.y1 |
| Conread position: | 11-184 |
| Cow position: | chr24:9091144-9090969 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 21, 141 |
| Conread position: | 11-193 |
| Cow position: | chr24:9544982-9545166 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 18, 83 |
| Conread position: | 11-193 |
| Cow position: | chr24:27147628-27147814 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 21, 75 |
| Conread position: | 11-202 |
| Cow position: | chr24:12087124-12087317 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 22, 42 |
| Conread position: | 13-162 |
| Cow position: | chr24:36709288-36709438 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 10, 20 |
| Conread position: | 19-193 |
| Cow position: | chr24:12334828-12334654 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 30, 13 |
| Conread position: | 28-188 |
| Cow position: | chr24:33934311-33934472 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 21, 123 |
| Conread position: | 28-193 |
| Cow position: | chr24:17696044-17695878 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 21, 123 |
| Conread position: | 28-504 |
| Cow position: | chr24:14383654-14383155 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 88 |
| Conread position: | 40-193 |
| Cow position: | chr24:29188241-29188395 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 9, 111 |
| Conread position: | 179-528 |
| Cow position: | chr24:12238424-12238788 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 57 |
| Conread position: | 188-522 |
| Cow position: | chr24:22972232-22972560 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 252 |
| Conread position: | 188-531 |
| Cow position: | chr24:6353289-6353640 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 52 |
| Conread position: | 188-532 |
| Cow position: | chr24:6129964-6130319 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 228 |
| Conread position: | 188-550 |
| Cow position: | chr24:5992086-5991700 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 345 |
| Conread position: | 188-550 |
| Cow position: | chr24:9545204-9545580 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 278 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 12, 88 |
| Conread position: | 193-517 |
| Cow position: | chr24:33934535-33934881 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 338 |
| Conread position: | 198-513 |
| Cow position: | chr24:6337541-6337880 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 44 |
| Conread position: | 198-517 |
| Cow position: | chr24:29188444-29188787 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 335 |
| Conread position: | 198-531 |
| Cow position: | chr24:13179865-13179513 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 255 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 48, 34 |
| Conread position: | 198-534 |
| Cow position: | chr24:147459-147102 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 219 |
| Conread position: | 211-517 |
| Cow position: | chr24:19702665-19702990 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 64 |
| Conread position: | 211-544 |
| Cow position: | chr24:13189354-13189699 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 119, 60 |
| Conread position: | 214-531 |
| Cow position: | chr24:6435651-6435990 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 116, 20 |
| Conread position: | 214-551 |
| Cow position: | chr24:13233425-13233785 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 318 |
| Conread position: | 215-534 |
| Cow position: | chr24:14278044-14277707 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 242 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 115, 30 |
| Conread position: | 219-577 |
| Cow position: | chr24:38638710-38639059 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 111, 27 |
| Conread position: | 227-517 |
| Cow position: | chr24:6060378-6060686 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 105, 62 |
| Conread position: | 248-517 |
| Cow position: | chr24:17300700-17300422 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 210 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 79, 189 |
| Conread position: | 256-508 |
| Cow position: | chr24:37199680-37199417 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 75, 32 |
| Conread position: | 294-550 |
| Cow position: | chr24:16097774-16098051 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 36, 237 |
| Conread position: | 318-530 |
| Cow position: | chr24:12205059-12204835 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 5, 110 |
| Conread position: | 318-550 |
| Cow position: | chr24:25437566-25437809 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 126 |
| Conread position: | 328-550 |
| Cow position: | chr24:10222885-10222648 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 184 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 39, 194 |
| Conread position: | 346-545 |
| Cow position: | chr24:6324049-6323834 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 17, 190 |
| Conread position: | 370-550 |
| Cow position: | chr24:8606147-8606342 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 37, 154 |
Show alignments to all cow chromosomes.