Cow genome map
| Conread name: | rthg23_c7.y1 |
| Conread position: | 7-193 |
| Cow position: | chr28:1386521-1386333 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 33, 145 |
| Conread position: | 11-192 |
| Cow position: | chr28:5938363-5938549 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 22, 144 |
| Conread position: | 11-192 |
| Cow position: | chr28:14704509-14704323 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 22, 144 |
| Conread position: | 11-193 |
| Cow position: | chr28:1166998-1166813 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 92 |
| Conread position: | 11-193 |
| Cow position: | chr28:1217275-1217091 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 22, 43 |
| Conread position: | 11-193 |
| Cow position: | chr28:1505748-1505932 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 25, 97 |
| Conread position: | 11-193 |
| Cow position: | chr28:3191377-3191190 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 22, 144 |
| Conread position: | 11-193 |
| Cow position: | chr28:8720068-8719881 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 21, 154 |
| Conread position: | 11-193 |
| Cow position: | chr28:26425377-26425190 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 144 |
| Conread position: | 11-196 |
| Cow position: | chr28:24668498-24668680 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 19, 57 |
| Conread position: | 11-582 |
| Cow position: | chr28:2085381-2085982 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 43 |
| Conread position: | 25-193 |
| Cow position: | chr28:5113400-5113231 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 24, 136 |
| Conread position: | 25-193 |
| Cow position: | chr28:29761033-29760864 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 28-193 |
| Cow position: | chr28:7741350-7741513 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 31-201 |
| Cow position: | chr28:7811351-7811524 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 121 |
| Conread position: | 32-192 |
| Cow position: | chr28:2988180-2988019 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 17, 125 |
| Conread position: | 165-550 |
| Cow position: | chr28:32791295-32790906 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 11 |
| Conread position: | 180-550 |
| Cow position: | chr28:9179710-9180102 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 274 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 150, 39 |
| Conread position: | 188-510 |
| Cow position: | chr28:13461083-13461426 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 53 |
| Conread position: | 188-530 |
| Cow position: | chr28:5799400-5799756 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 54 |
| Conread position: | 188-578 |
| Cow position: | chr28:21360598-21360990 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 73 |
| Conread position: | 188-584 |
| Cow position: | chr28:29821098-29821518 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 210 |
| Conread position: | 198-522 |
| Cow position: | chr28:5567254-5567590 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 76 |
| Conread position: | 198-534 |
| Cow position: | chr28:26425141-26424789 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 327 |
| Conread position: | 198-547 |
| Cow position: | chr28:1166765-1166407 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 135 |
| Conread position: | 198-550 |
| Cow position: | chr28:7003110-7003483 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 103 |
| Conread position: | 198-550 |
| Cow position: | chr28:17666192-17665822 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 224 |
| Conread position: | 198-550 |
| Cow position: | chr28:18519334-18518962 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 76 |
| Conread position: | 198-550 |
| Cow position: | chr28:24668724-24669087 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 214 |
| Conread position: | 198-581 |
| Cow position: | chr28:5750593-5750187 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 338 |
| Conread position: | 204-518 |
| Cow position: | chr28:10646301-10645976 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 54 |
| Conread position: | 204-534 |
| Cow position: | chr28:17389521-17389871 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 325 |
| Conread position: | 204-551 |
| Cow position: | chr28:21566580-21566944 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 158 |
| Conread position: | 212-550 |
| Cow position: | chr28:24589985-24590342 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 314 |
| Conread position: | 215-539 |
| Cow position: | chr28:1505998-1506341 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 313 |
| Conread position: | 224-534 |
| Cow position: | chr28:5765879-5766200 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 24 |
| Conread position: | 230-550 |
| Cow position: | chr28:33253458-33253794 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 41 |
| Conread position: | 286-550 |
| Cow position: | chr28:1216634-1216346 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 83, 47 |
| Conread position: | 309-550 |
| Cow position: | chr28:15684683-15684934 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 21, 124 |
| Conread position: | 354-582 |
| Cow position: | chr28:34595505-34595749 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 15, 55 |
Show alignments to all cow chromosomes.