Cow genome map
Conread name: | rthg23_c7.y1 |
Conread position: | 11-151 |
Cow position: | chr4:46665083-46665227 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 111 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 11-193 |
Cow position: | chr4:6489798-6489611 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 138 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 22, 144 |
Conread position: | 11-193 |
Cow position: | chr4:12587898-12588082 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 136 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 20, 144 |
Conread position: | 11-193 |
Cow position: | chr4:16639176-16639363 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 134 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 22, 144 |
Conread position: | 11-193 |
Cow position: | chr4:17925396-17925212 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 134 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 29, 141 |
Conread position: | 11-193 |
Cow position: | chr4:18517464-18517651 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 135 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 22, 144 |
Conread position: | 11-193 |
Cow position: | chr4:31669841-31670026 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 132 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 29, 149 |
Conread position: | 11-193 |
Cow position: | chr4:43319077-43318890 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 141 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 22, 144 |
Conread position: | 11-193 |
Cow position: | chr4:48026968-48027152 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 137 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 22, 43 |
Conread position: | 11-534 |
Cow position: | chr4:33494156-33494707 (view UCSC Genome Browser custom track) |
Alignm length: | 560 |
Alignm identity: | 372 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 22, 143 |
Conread position: | 13-193 |
Cow position: | chr4:51042720-51042538 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 136 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 36, 139 |
Conread position: | 13-193 |
Cow position: | chr4:57984549-57984731 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 132 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 29, 147 |
Conread position: | 28-193 |
Cow position: | chr4:1049678-1049512 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 128 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 22, 123 |
Conread position: | 28-193 |
Cow position: | chr4:25598910-25598747 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 120 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 21, 123 |
Conread position: | 28-193 |
Cow position: | chr4:41333293-41333453 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 121 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 28-193 |
Cow position: | chr4:67681778-67681944 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 121 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 22, 123 |
Conread position: | 28-196 |
Cow position: | chr4:16360498-16360670 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 126 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 187-534 |
Cow position: | chr4:493811-493466 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 241 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 39, 9 |
Conread position: | 188-517 |
Cow position: | chr4:14820071-14819760 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 91 |
Conread position: | 188-517 |
Cow position: | chr4:26876993-26876642 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 343 |
Conread position: | 188-522 |
Cow position: | chr4:1929854-1929495 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 346 |
Conread position: | 188-550 |
Cow position: | chr4:530191-530573 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 225 |
Conread position: | 188-550 |
Cow position: | chr4:67681980-67682365 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 45 |
Conread position: | 189-521 |
Cow position: | chr4:34178449-34178095 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 196-534 |
Cow position: | chr4:60263364-60263005 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 273 |
Conread position: | 198-529 |
Cow position: | chr4:51042489-51042136 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 35 |
Conread position: | 198-534 |
Cow position: | chr4:57984786-57985144 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 331 |
Conread position: | 198-550 |
Cow position: | chr4:9847413-9847039 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 33 |
Conread position: | 198-550 |
Cow position: | chr4:12240418-12240052 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 90 |
Conread position: | 198-550 |
Cow position: | chr4:12588130-12588500 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 329 |
Conread position: | 198-550 |
Cow position: | chr4:19005512-19005145 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 14 |
Conread position: | 200-466 |
Cow position: | chr4:54239773-54240041 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 190 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 127, 93 |
Conread position: | 200-521 |
Cow position: | chr4:36897180-36897520 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 10 |
Conread position: | 203-517 |
Cow position: | chr4:46665329-46665675 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 40 |
Conread position: | 204-551 |
Cow position: | chr4:50981286-50981656 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 251 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 54, 14 |
Conread position: | 209-510 |
Cow position: | chr4:11110469-11110148 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 69 |
Conread position: | 212-511 |
Cow position: | chr4:28832382-28832677 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 30 |
Conread position: | 212-536 |
Cow position: | chr4:3126617-3126965 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 255 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 37, 29 |
Conread position: | 212-547 |
Cow position: | chr4:44780412-44780055 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 252 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 119, 319 |
Conread position: | 212-547 |
Cow position: | chr4:69521356-69521691 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 56 |
Conread position: | 212-550 |
Cow position: | chr4:99403-99050 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 201 |
Conread position: | 213-539 |
Cow position: | chr4:42405419-42405770 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 257 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 36, 86 |
Conread position: | 216-508 |
Cow position: | chr4:33072001-33071694 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 148, 58 |
Conread position: | 219-550 |
Cow position: | chr4:41959715-41960068 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 252 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 15, 70 |
Conread position: | 222-546 |
Cow position: | chr4:2089219-2089561 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 235 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 110, 9 |
Conread position: | 242-517 |
Cow position: | chr4:44726430-44726717 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 205 |
Conread position: | 278-550 |
Cow position: | chr4:41428189-41428481 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 211 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 52, 10 |
Conread position: | 311-530 |
Cow position: | chr4:13958089-13958325 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 175 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 19, 110 |
Conread position: | 393-550 |
Cow position: | chr4:49716784-49716950 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 131 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 37, 8 |
Show alignments to all cow chromosomes.