Cow genome map

Conread name: rthg23_c7.y1

Conread position: 11-151
Cow position: chr4:46665083-46665227 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 11-193
Cow position: chr4:6489798-6489611 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 22, 144

Conread position: 11-193
Cow position: chr4:12587898-12588082 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 20, 144

Conread position: 11-193
Cow position: chr4:16639176-16639363 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 22, 144

Conread position: 11-193
Cow position: chr4:17925396-17925212 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 141

Conread position: 11-193
Cow position: chr4:18517464-18517651 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 22, 144

Conread position: 11-193
Cow position: chr4:31669841-31670026 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 149

Conread position: 11-193
Cow position: chr4:43319077-43318890 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 22, 144

Conread position: 11-193
Cow position: chr4:48026968-48027152 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 43

Conread position: 11-534
Cow position: chr4:33494156-33494707 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 372
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 22, 143

Conread position: 13-193
Cow position: chr4:51042720-51042538 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 36, 139

Conread position: 13-193
Cow position: chr4:57984549-57984731 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 147

Conread position: 28-193
Cow position: chr4:1049678-1049512 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 22, 123

Conread position: 28-193
Cow position: chr4:25598910-25598747 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 123

Conread position: 28-193
Cow position: chr4:41333293-41333453 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 28-193
Cow position: chr4:67681778-67681944 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 123

Conread position: 28-196
Cow position: chr4:16360498-16360670 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 187-534
Cow position: chr4:493811-493466 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 241
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 39, 9

Conread position: 188-517
Cow position: chr4:14820071-14819760 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 91

Conread position: 188-517
Cow position: chr4:26876993-26876642 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 343

Conread position: 188-522
Cow position: chr4:1929854-1929495 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 346

Conread position: 188-550
Cow position: chr4:530191-530573 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 225

Conread position: 188-550
Cow position: chr4:67681980-67682365 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 45

Conread position: 189-521
Cow position: chr4:34178449-34178095 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 196-534
Cow position: chr4:60263364-60263005 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 273

Conread position: 198-529
Cow position: chr4:51042489-51042136 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 35

Conread position: 198-534
Cow position: chr4:57984786-57985144 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 331

Conread position: 198-550
Cow position: chr4:9847413-9847039 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 33

Conread position: 198-550
Cow position: chr4:12240418-12240052 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 90

Conread position: 198-550
Cow position: chr4:12588130-12588500 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 329

Conread position: 198-550
Cow position: chr4:19005512-19005145 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 14

Conread position: 200-466
Cow position: chr4:54239773-54240041 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 190
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 127, 93

Conread position: 200-521
Cow position: chr4:36897180-36897520 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 10

Conread position: 203-517
Cow position: chr4:46665329-46665675 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 40

Conread position: 204-551
Cow position: chr4:50981286-50981656 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 251
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 54, 14

Conread position: 209-510
Cow position: chr4:11110469-11110148 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 69

Conread position: 212-511
Cow position: chr4:28832382-28832677 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 30

Conread position: 212-536
Cow position: chr4:3126617-3126965 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 255
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 37, 29

Conread position: 212-547
Cow position: chr4:44780412-44780055 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 252
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 119, 319

Conread position: 212-547
Cow position: chr4:69521356-69521691 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 56

Conread position: 212-550
Cow position: chr4:99403-99050 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 201

Conread position: 213-539
Cow position: chr4:42405419-42405770 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 257
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 86

Conread position: 216-508
Cow position: chr4:33072001-33071694 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 58

Conread position: 219-550
Cow position: chr4:41959715-41960068 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 252
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 15, 70

Conread position: 222-546
Cow position: chr4:2089219-2089561 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 235
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 110, 9

Conread position: 242-517
Cow position: chr4:44726430-44726717 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 205

Conread position: 278-550
Cow position: chr4:41428189-41428481 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 211
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 52, 10

Conread position: 311-530
Cow position: chr4:13958089-13958325 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 19, 110

Conread position: 393-550
Cow position: chr4:49716784-49716950 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 8

Show alignments to all cow chromosomes.