Cow genome map


           Conread name:
           rthg23_c7.y1
        

               Conread position:
               3-193
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               10, 148
               

               Conread position:
               11-193
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               22, 144
               

               Conread position:
               11-193
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               22, 89
               

               Conread position:
               13-191
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               27, 137
               

               Conread position:
               14-193
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               19, 151
               

               Conread position:
               14-193
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               16, 138
               

               Conread position:
               28-193
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               21, 123
               

               Conread position:
               28-193
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               34-194
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               165-536
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 11
               

               Conread position:
               166-550
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               271
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               188-525
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               188-531
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 150
               

               Conread position:
               188-534
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 358
               

               Conread position:
               188-536
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 56
               

               Conread position:
               188-546
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               259
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               13, 340
               

               Conread position:
               196-523
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               197-534
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               169, 34
               

               Conread position:
               197-534
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 43
               

               Conread position:
               198-517
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 328
               

               Conread position:
               198-534
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 49
               

               Conread position:
               198-544
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 128
               

               Conread position:
               198-547
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 326
               

               Conread position:
               198-547
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 65
               

               Conread position:
               198-550
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 194
               

               Conread position:
               198-550
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 76
               

               Conread position:
               198-550
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 88
               

               Conread position:
               198-550
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 337
               

               Conread position:
               198-550
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               263
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               132, 33
               

               Conread position:
               198-550
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 121
               

               Conread position:
               198-550
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 336
               

               Conread position:
               198-550
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 334
               

               Conread position:
               198-582
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 44
               

               Conread position:
               198-583
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 332
               

               Conread position:
               199-550
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 77
               

               Conread position:
               200-522
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               245
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               74, 332
               

               Conread position:
               200-578
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               271
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               79, 87
               

               Conread position:
               204-504
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               18, 34
               

               Conread position:
               204-531
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               157, 38
               

               Conread position:
               204-550
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               261
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               126, 103
               

               Conread position:
               206-517
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 66
               

               Conread position:
               209-534
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 21
               

               Conread position:
               209-550
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               256
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               121, 10
               

               Conread position:
               212-532
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               118, 320
               

               Conread position:
               212-547
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               251
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               118, 243
               

               Conread position:
               212-550
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               118, 29
               

               Conread position:
               212-550
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 199
               

               Conread position:
               212-550
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 42
               

               Conread position:
               212-564
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 315
               

               Conread position:
               219-550
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 304
               

               Conread position:
               230-550
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 88
               

               Conread position:
               278-580
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 203
               

               Conread position:
               282-517
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               196
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               48, 246
               

               Conread position:
               283-510
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               16, 131
               

               Conread position:
               312-534
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               20, 217
               

               Conread position:
               326-544
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               34, 205
               

               Conread position:
               365-547
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               43, 166
               

               Conread position:
               382-534
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               48, 135
               

               Conread position:
               384-550
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               13, 135
               
Show alignments to all cow chromosomes.