Cow genome map

Conread name: rthg23_c7.y1

Conread position: 11-152
Cow position:
Alignm length: 146
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 43

Conread position: 11-191
Cow position:
Alignm length: 187
Alignm identity: 136
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 22, 154

Conread position: 11-192
Cow position:
Alignm length: 188
Alignm identity: 140
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 22, 131

Conread position: 11-192
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 11-192
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 72

Conread position: 11-193
Cow position:
Alignm length: 189
Alignm identity: 140
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 22, 144

Conread position: 11-193
Cow position:
Alignm length: 189
Alignm identity: 135
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 22, 144

Conread position: 11-193
Cow position:
Alignm length: 189
Alignm identity: 136
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 22, 144

Conread position: 11-193
Cow position:
Alignm length: 185
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 29, 140

Conread position: 11-193
Cow position:
Alignm length: 186
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 24, 141

Conread position: 11-193
Cow position:
Alignm length: 189
Alignm identity: 147
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 21, 144

Conread position: 11-202
Cow position:
Alignm length: 198
Alignm identity: 145
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 22, 144

Conread position: 11-202
Cow position:
Alignm length: 199
Alignm identity: 150
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 21, 191

Conread position: 11-550
Cow position:
Alignm length: 556
Alignm identity: 345
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 22, 75

Conread position: 12-193
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 163

Conread position: 19-193
Cow position:
Alignm length: 177
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 30, 21

Conread position: 19-202
Cow position:
Alignm length: 186
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 10

Conread position: 21-181
Cow position:
Alignm length: 163
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 28, 8

Conread position: 23-193
Cow position:
Alignm length: 173
Alignm identity: 130
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 26, 6

Conread position: 28-162
Cow position:
Alignm length: 137
Alignm identity: 105
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 21, 123

Conread position: 28-193
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 34

Conread position: 28-193
Cow position:
Alignm length: 168
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 123

Conread position: 28-193
Cow position:
Alignm length: 166
Alignm identity: 125
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 28-193
Cow position:
Alignm length: 169
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 26, 123

Conread position: 28-193
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 123

Conread position: 28-193
Cow position:
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 123

Conread position: 45-202
Cow position:
Alignm length: 158
Alignm identity: 115
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 48-193
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 48-201
Cow position:
Alignm length: 154
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 165-509
Cow position:
Alignm length: 349
Alignm identity: 230
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 46, 9

Conread position: 165-550
Cow position:
Alignm length: 408
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 11

Conread position: 165-550
Cow position:
Alignm length: 409
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 11

Conread position: 188-507
Cow position:
Alignm length: 339
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 14

Conread position: 188-550
Cow position:
Alignm length: 390
Alignm identity: 269
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 13, 130

Conread position: 188-550
Cow position:
Alignm length: 390
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 347

Conread position: 188-550
Cow position:
Alignm length: 396
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 206

Conread position: 188-551
Cow position:
Alignm length: 390
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 346

Conread position: 191-530
Cow position:
Alignm length: 368
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 13

Conread position: 197-583
Cow position:
Alignm length: 409
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 53

Conread position: 198-517
Cow position:
Alignm length: 333
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 230

Conread position: 198-517
Cow position:
Alignm length: 334
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 53

Conread position: 198-517
Cow position:
Alignm length: 348
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 338

Conread position: 198-533
Cow position:
Alignm length: 352
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 62

Conread position: 198-534
Cow position:
Alignm length: 357
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 81

Conread position: 198-534
Cow position:
Alignm length: 362
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 24

Conread position: 198-547
Cow position:
Alignm length: 373
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 33

Conread position: 198-549
Cow position:
Alignm length: 378
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 44

Conread position: 198-550
Cow position:
Alignm length: 368
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 58

Conread position: 198-550
Cow position:
Alignm length: 379
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 194

Conread position: 198-550
Cow position:
Alignm length: 379
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 336

Conread position: 198-550
Cow position:
Alignm length: 371
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 204

Conread position: 198-550
Cow position:
Alignm length: 367
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 286

Conread position: 198-550
Cow position:
Alignm length: 377
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 334

Conread position: 199-534
Cow position:
Alignm length: 352
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 10

Conread position: 199-550
Cow position:
Alignm length: 376
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 328

Conread position: 200-550
Cow position:
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 10

Conread position: 206-550
Cow position:
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 91

Conread position: 211-550
Cow position:
Alignm length: 361
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 78

Conread position: 212-536
Cow position:
Alignm length: 350
Alignm identity: 251
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 118, 63

Conread position: 212-550
Cow position:
Alignm length: 363
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 178

Conread position: 212-550
Cow position:
Alignm length: 359
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 30

Conread position: 212-550
Cow position:
Alignm length: 369
Alignm identity: 262
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 118, 326

Conread position: 215-517
Cow position:
Alignm length: 323
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 12

Conread position: 215-517
Cow position:
Alignm length: 318
Alignm identity: 227
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 31, 57

Conread position: 215-522
Cow position:
Alignm length: 329
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 266

Conread position: 218-550
Cow position:
Alignm length: 365
Alignm identity: 256
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 40, 14

Conread position: 219-530
Cow position:
Alignm length: 338
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 313

Conread position: 219-534
Cow position:
Alignm length: 340
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 23

Conread position: 219-534
Cow position:
Alignm length: 328
Alignm identity: 219
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 111, 12

Conread position: 227-513
Cow position:
Alignm length: 313
Alignm identity: 231
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 23, 0

Conread position: 245-517
Cow position:
Alignm length: 298
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 48

Conread position: 263-544
Cow position:
Alignm length: 291
Alignm identity: 200
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 63, 43

Conread position: 266-548
Cow position:
Alignm length: 303
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 119

Conread position: 276-505
Cow position:
Alignm length: 233
Alignm identity: 159
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 49, 106

Conread position: 281-536
Cow position:
Alignm length: 273
Alignm identity: 199
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 49, 37

Conread position: 309-550
Cow position:
Alignm length: 265
Alignm identity: 197
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 21, 105

Conread position: 372-550
Cow position:
Alignm length: 190
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 9

Show alignments to all cow chromosomes.