Cow genome map
| Conread name: | rthg23_c7.y1 |
| Conread position: | 11-179 |
| Cow position: | chr7:45948249-45948079 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 29, 141 |
| Conread position: | 11-184 |
| Cow position: | chr7:5663442-5663624 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 19, 148 |
| Conread position: | 11-190 |
| Cow position: | chr7:1609753-1609569 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 21, 154 |
| Conread position: | 11-193 |
| Cow position: | chr7:8144341-8144154 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 22, 144 |
| Conread position: | 11-193 |
| Cow position: | chr7:10430531-10430344 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 22, 144 |
| Conread position: | 11-193 |
| Cow position: | chr7:13533008-13532824 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 22, 43 |
| Conread position: | 11-193 |
| Cow position: | chr7:14138704-14138517 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 22, 144 |
| Conread position: | 11-193 |
| Cow position: | chr7:33405348-33405164 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 28, 141 |
| Conread position: | 11-193 |
| Cow position: | chr7:55537029-55536849 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 22, 41 |
| Conread position: | 11-193 |
| Cow position: | chr7:67799718-67799902 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 22, 143 |
| Conread position: | 11-201 |
| Cow position: | chr7:525868-526062 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 22, 144 |
| Conread position: | 11-202 |
| Cow position: | chr7:34150199-34150392 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 29, 141 |
| Conread position: | 11-203 |
| Cow position: | chr7:48635320-48635514 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 17, 141 |
| Conread position: | 25-193 |
| Cow position: | chr7:39792680-39792849 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 24, 126 |
| Conread position: | 28-192 |
| Cow position: | chr7:15810545-15810383 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 21, 111 |
| Conread position: | 28-193 |
| Cow position: | chr7:34486829-34486995 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 21, 123 |
| Conread position: | 40-193 |
| Cow position: | chr7:21234085-21233933 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 9, 111 |
| Conread position: | 40-193 |
| Cow position: | chr7:64240078-64239924 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 9, 111 |
| Conread position: | 40-201 |
| Cow position: | chr7:61578380-61578542 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 9, 111 |
| Conread position: | 171-584 |
| Cow position: | chr7:65337695-65337286 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 287 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 16, 29 |
| Conread position: | 176-525 |
| Cow position: | chr7:21126556-21126190 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 188-510 |
| Cow position: | chr7:3156582-3156932 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 57 |
| Conread position: | 188-517 |
| Cow position: | chr7:42871259-42871612 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 345 |
| Conread position: | 188-517 |
| Cow position: | chr7:67676214-67676548 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 62 |
| Conread position: | 188-521 |
| Cow position: | chr7:545962-546318 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 55 |
| Conread position: | 188-529 |
| Cow position: | chr7:1403343-1403010 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 246 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 9, 18 |
| Conread position: | 188-534 |
| Cow position: | chr7:24807358-24806999 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 190 |
| Conread position: | 188-547 |
| Cow position: | chr7:40268848-40268481 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 21 |
| Conread position: | 188-550 |
| Cow position: | chr7:13532786-13532414 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 80 |
| Conread position: | 188-550 |
| Cow position: | chr7:21311568-21311950 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 87 |
| Conread position: | 193-534 |
| Cow position: | chr7:5308991-5308630 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 261 |
| Conread position: | 196-530 |
| Cow position: | chr7:59679978-59680328 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 329 |
| Conread position: | 198-530 |
| Cow position: | chr7:5663689-5664047 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 122 |
| Conread position: | 198-532 |
| Cow position: | chr7:1452774-1453127 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 79 |
| Conread position: | 198-534 |
| Cow position: | chr7:21233880-21233521 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 334 |
| Conread position: | 198-534 |
| Cow position: | chr7:33332687-33333044 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 332 |
| Conread position: | 198-534 |
| Cow position: | chr7:34487042-34487396 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 215 |
| Conread position: | 198-550 |
| Cow position: | chr7:1371516-1371146 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 292 |
| Conread position: | 198-550 |
| Cow position: | chr7:24878752-24878383 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 31 |
| Conread position: | 198-550 |
| Cow position: | chr7:38397943-38398318 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 334 |
| Conread position: | 198-550 |
| Cow position: | chr7:51015389-51015758 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 254 |
| Conread position: | 198-550 |
| Cow position: | chr7:66905850-66906226 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 335 |
| Conread position: | 198-580 |
| Cow position: | chr7:67429701-67430099 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 14 |
| Conread position: | 198-584 |
| Cow position: | chr7:14214238-14213838 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 89 |
| Conread position: | 199-536 |
| Cow position: | chr7:57211293-57211639 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 267 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 131, 27 |
| Conread position: | 200-510 |
| Cow position: | chr7:48635565-48635881 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 192 |
| Conread position: | 200-528 |
| Cow position: | chr7:24058578-24058914 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 13 |
| Conread position: | 204-517 |
| Cow position: | chr7:20774200-20773867 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 325 |
| Conread position: | 204-521 |
| Cow position: | chr7:53407740-53408058 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 124, 37 |
| Conread position: | 204-531 |
| Cow position: | chr7:5261790-5261436 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 254 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 107, 332 |
| Conread position: | 211-521 |
| Cow position: | chr7:20798301-20797976 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 201 |
| Conread position: | 212-522 |
| Cow position: | chr7:52763423-52763757 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 321 |
| Conread position: | 212-532 |
| Cow position: | chr7:11447702-11448051 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 252 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 16, 326 |
| Conread position: | 212-536 |
| Cow position: | chr7:25440645-25440990 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 253 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 115, 30 |
| Conread position: | 214-516 |
| Cow position: | chr7:20533093-20533415 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 230 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 223-535 |
| Cow position: | chr7:54649049-54649384 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 107, 309 |
| Conread position: | 244-532 |
| Cow position: | chr7:61578680-61578982 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 189 |
| Conread position: | 251-534 |
| Cow position: | chr7:49829143-49828853 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 224 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 79, 15 |
| Conread position: | 251-578 |
| Cow position: | chr7:995938-996274 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 128 |
| Conread position: | 277-523 |
| Cow position: | chr7:34546569-34546837 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 53, 20 |
| Conread position: | 278-517 |
| Cow position: | chr7:55041282-55041020 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 52, 254 |
| Conread position: | 282-550 |
| Cow position: | chr7:7259740-7260020 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 129, 16 |
| Conread position: | 310-550 |
| Cow position: | chr7:40320432-40320680 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 99 |
| Conread position: | 328-549 |
| Cow position: | chr7:39097280-39097046 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 73, 35 |
| Conread position: | 347-550 |
| Cow position: | chr7:24934274-24934054 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 17, 179 |
| Conread position: | 363-550 |
| Cow position: | chr7:33405091-33404890 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 67, 160 |
| Conread position: | 363-581 |
| Cow position: | chr7:59685111-59685339 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 56, 158 |
| Conread position: | 365-536 |
| Cow position: | chr7:39793168-39793354 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 55, 158 |
| Conread position: | 383-547 |
| Cow position: | chr7:34417162-34416983 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 15, 142 |
Show alignments to all cow chromosomes.