Cow genome map

Conread name: rthg23_c7.y1

Conread position: 3-582
Cow position: chr8:19051547-19052169 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 110

Conread position: 10-184
Cow position: chr8:11763018-11763199 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 11-189
Cow position: chr8:2886827-2887009 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 19, 144

Conread position: 11-190
Cow position: chr8:51666743-51666558 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 11-193
Cow position: chr8:3855935-3855759 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 11-193
Cow position: chr8:5017259-5017446 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 22, 154

Conread position: 11-193
Cow position: chr8:17312103-17312290 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 22, 144

Conread position: 11-193
Cow position: chr8:19330792-19330979 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 22, 144

Conread position: 11-193
Cow position: chr8:32318472-32318285 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 22, 144

Conread position: 11-193
Cow position: chr8:32630948-32630761 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 19, 144

Conread position: 11-193
Cow position: chr8:36635419-36635237 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 128
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 29, 40

Conread position: 11-193
Cow position: chr8:42484996-42485183 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 144

Conread position: 11-193
Cow position: chr8:46051267-46051451 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 22, 132

Conread position: 11-193
Cow position: chr8:60061463-60061650 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 144

Conread position: 11-196
Cow position: chr8:8911587-8911771 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 29, 53

Conread position: 11-201
Cow position: chr8:50930050-50929855 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 22, 144

Conread position: 13-193
Cow position: chr8:28878022-28877837 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 148
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 9, 150

Conread position: 19-190
Cow position: chr8:11802915-11803087 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 10

Conread position: 19-190
Cow position: chr8:42419347-42419171 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 13

Conread position: 19-193
Cow position: chr8:25437411-25437581 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 30, 20

Conread position: 23-193
Cow position: chr8:12450114-12450285 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 27, 128

Conread position: 25-192
Cow position: chr8:42158888-42158721 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 20, 7

Conread position: 27-192
Cow position: chr8:44243481-44243318 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 22, 121

Conread position: 28-192
Cow position: chr8:7161998-7162163 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 21, 123

Conread position: 28-192
Cow position: chr8:42579478-42579314 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 121

Conread position: 28-193
Cow position: chr8:3785737-3785903 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 123

Conread position: 28-193
Cow position: chr8:4687503-4687669 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 133

Conread position: 28-193
Cow position: chr8:14927778-14927614 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 123

Conread position: 28-193
Cow position: chr8:29007743-29007906 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 28-193
Cow position: chr8:39195114-39194948 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 123

Conread position: 28-193
Cow position: chr8:50287824-50287655 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 32-580
Cow position: chr8:46454633-46454087 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 368
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 17, 49

Conread position: 37-192
Cow position: chr8:33589487-33589641 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 119, 0

Conread position: 37-193
Cow position: chr8:11832821-11832976 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 112, 0

Conread position: 40-193
Cow position: chr8:2170260-2170107 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 110

Conread position: 48-193
Cow position: chr8:21157667-21157523 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 101, 0

Conread position: 165-534
Cow position: chr8:3785920-3786300 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 29

Conread position: 166-504
Cow position: chr8:8517310-8516956 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 255
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 10, 18

Conread position: 176-550
Cow position: chr8:32041465-32041078 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 273
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 8, 39

Conread position: 180-534
Cow position: chr8:9964175-9963837 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 242
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 89, 24

Conread position: 180-550
Cow position: chr8:21157494-21157105 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 39

Conread position: 188-517
Cow position: chr8:29007940-29008283 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 178

Conread position: 188-546
Cow position: chr8:23135308-23134929 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 343

Conread position: 188-550
Cow position: chr8:9736545-9736928 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 342

Conread position: 188-550
Cow position: chr8:58185279-58184909 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 44

Conread position: 188-584
Cow position: chr8:21230385-21230795 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 44

Conread position: 196-517
Cow position: chr8:41644359-41644032 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 90

Conread position: 196-517
Cow position: chr8:47075473-47075814 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 46

Conread position: 196-550
Cow position: chr8:51857318-51857656 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 64

Conread position: 197-504
Cow position: chr8:42158672-42158364 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 37

Conread position: 198-510
Cow position: chr8:49859450-49859121 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 167

Conread position: 198-525
Cow position: chr8:23771956-23772311 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 198-547
Cow position: chr8:46051497-46051867 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 76

Conread position: 198-547
Cow position: chr8:47661004-47660639 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 44

Conread position: 198-550
Cow position: chr8:33589693-33590068 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 334

Conread position: 198-550
Cow position: chr8:39194899-39194528 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 33

Conread position: 198-550
Cow position: chr8:50960287-50959924 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 190

Conread position: 198-584
Cow position: chr8:8400798-8400393 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 44

Conread position: 199-550
Cow position: chr8:32318235-32317857 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 33

Conread position: 199-550
Cow position: chr8:50929802-50929429 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 332

Conread position: 200-536
Cow position: chr8:7162217-7162570 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 10

Conread position: 204-517
Cow position: chr8:10749683-10750007 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 241
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 103, 37

Conread position: 204-534
Cow position: chr8:3855704-3855355 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 43

Conread position: 204-550
Cow position: chr8:1347932-1347565 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 27

Conread position: 204-583
Cow position: chr8:41740081-41740476 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 257
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 155, 163

Conread position: 212-536
Cow position: chr8:2887079-2887425 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 248
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 120, 22

Conread position: 212-550
Cow position: chr8:14631341-14630978 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 261
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 115, 106

Conread position: 212-550
Cow position: chr8:37654534-37654173 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 253
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 118, 320

Conread position: 212-582
Cow position: chr8:25377311-25377697 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 268
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 118, 162

Conread position: 215-550
Cow position: chr8:59261596-59261254 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 160

Conread position: 219-534
Cow position: chr8:46218403-46218085 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 239
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 49, 56

Conread position: 220-550
Cow position: chr8:60061739-60062082 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 54

Conread position: 220-551
Cow position: chr8:1320377-1320730 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 242
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 110, 14

Conread position: 223-531
Cow position: chr8:32630690-32630366 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 243
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 107, 45

Conread position: 230-578
Cow position: chr8:8911826-8912177 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 263

Conread position: 234-532
Cow position: chr8:2169174-2168853 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 237
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 10, 298

Conread position: 234-564
Cow position: chr8:38605859-38605516 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 18

Conread position: 242-550
Cow position: chr8:37656203-37655870 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 234
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 7, 292

Conread position: 256-547
Cow position: chr8:9539318-9539024 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 130

Conread position: 275-550
Cow position: chr8:49697597-49697303 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 218
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 62, 19

Conread position: 280-534
Cow position: chr8:28878410-28878684 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 209
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 50, 249

Conread position: 296-550
Cow position: chr8:21204996-21205255 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 22

Conread position: 299-517
Cow position: chr8:40892055-40891827 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 180
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 33, 19

Conread position: 322-550
Cow position: chr8:14255629-14255868 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 47

Conread position: 328-584
Cow position: chr8:6764844-6764566 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 203

Conread position: 355-534
Cow position: chr8:32647989-32648177 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 52, 12

Conread position: 364-534
Cow position: chr8:20135955-20135775 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 66, 8

Conread position: 369-532
Cow position: chr8:3748712-3748533 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 31, 156

Conread position: 384-550
Cow position: chr8:24914798-24914634 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 20, 38

Show alignments to all cow chromosomes.