Cow genome map

Conread name: rthg23_c7.y1

Conread position: 5-202
Cow position:
Alignm length: 204
Alignm identity: 152
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 28, 7

Conread position: 11-174
Cow position:
Alignm length: 170
Alignm identity: 122
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 21, 144

Conread position: 11-192
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 95

Conread position: 11-192
Cow position:
Alignm length: 188
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 22, 142

Conread position: 11-193
Cow position:
Alignm length: 189
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 144

Conread position: 11-193
Cow position:
Alignm length: 187
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 43

Conread position: 11-193
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 22, 154

Conread position: 11-193
Cow position:
Alignm length: 189
Alignm identity: 143
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 22, 144

Conread position: 11-193
Cow position:
Alignm length: 186
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 141

Conread position: 12-193
Cow position:
Alignm length: 185
Alignm identity: 134
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 28, 140

Conread position: 15-193
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 25, 143

Conread position: 15-193
Cow position:
Alignm length: 181
Alignm identity: 131
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 34, 10

Conread position: 21-193
Cow position:
Alignm length: 175
Alignm identity: 127
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 28, 8

Conread position: 25-191
Cow position:
Alignm length: 169
Alignm identity: 126
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 21, 126

Conread position: 25-192
Cow position:
Alignm length: 170
Alignm identity: 119
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 78, 126

Conread position: 27-201
Cow position:
Alignm length: 177
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 81

Conread position: 28-192
Cow position:
Alignm length: 167
Alignm identity: 124
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 21, 28

Conread position: 28-192
Cow position:
Alignm length: 165
Alignm identity: 117
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 28-192
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 133

Conread position: 28-193
Cow position:
Alignm length: 168
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 123

Conread position: 28-193
Cow position:
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 123

Conread position: 28-193
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 123

Conread position: 28-202
Cow position:
Alignm length: 178
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 76

Conread position: 37-190
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 112, 0

Conread position: 40-192
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 111

Conread position: 40-193
Cow position:
Alignm length: 156
Alignm identity: 113
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 9, 111

Conread position: 48-193
Cow position:
Alignm length: 146
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 50-193
Cow position:
Alignm length: 144
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 99, 0

Conread position: 180-550
Cow position:
Alignm length: 395
Alignm identity: 271
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 150, 39

Conread position: 188-521
Cow position:
Alignm length: 358
Alignm identity: 250
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 13, 0

Conread position: 188-524
Cow position:
Alignm length: 357
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 340

Conread position: 188-534
Cow position:
Alignm length: 359
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 100

Conread position: 188-536
Cow position:
Alignm length: 370
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 341

Conread position: 188-550
Cow position:
Alignm length: 388
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 345

Conread position: 188-550
Cow position:
Alignm length: 389
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 48

Conread position: 188-550
Cow position:
Alignm length: 385
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 229

Conread position: 191-550
Cow position:
Alignm length: 378
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 137

Conread position: 197-550
Cow position:
Alignm length: 378
Alignm identity: 259
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 90, 180

Conread position: 198-510
Cow position:
Alignm length: 332
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 150

Conread position: 198-518
Cow position:
Alignm length: 334
Alignm identity: 245
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 166, 53

Conread position: 198-525
Cow position:
Alignm length: 342
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 275

Conread position: 198-525
Cow position:
Alignm length: 356
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 198-533
Cow position:
Alignm length: 361
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 108

Conread position: 198-534
Cow position:
Alignm length: 347
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 88

Conread position: 198-534
Cow position:
Alignm length: 343
Alignm identity: 245
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 28, 172

Conread position: 198-536
Cow position:
Alignm length: 358
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 229

Conread position: 198-550
Cow position:
Alignm length: 372
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 76

Conread position: 198-550
Cow position:
Alignm length: 370
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 44

Conread position: 198-550
Cow position:
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 335

Conread position: 198-550
Cow position:
Alignm length: 376
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 333

Conread position: 198-550
Cow position:
Alignm length: 377
Alignm identity: 260
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 132, 334

Conread position: 198-550
Cow position:
Alignm length: 376
Alignm identity: 261
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 132, 333

Conread position: 198-551
Cow position:
Alignm length: 370
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 98

Conread position: 198-582
Cow position:
Alignm length: 409
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 334

Conread position: 199-534
Cow position:
Alignm length: 358
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 38

Conread position: 200-550
Cow position:
Alignm length: 381
Alignm identity: 264
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 95, 160

Conread position: 203-521
Cow position:
Alignm length: 331
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 159

Conread position: 204-532
Cow position:
Alignm length: 354
Alignm identity: 256
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 123, 13

Conread position: 204-581
Cow position:
Alignm length: 405
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 76

Conread position: 205-536
Cow position:
Alignm length: 352
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 209

Conread position: 206-522
Cow position:
Alignm length: 333
Alignm identity: 236
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 46, 69

Conread position: 211-544
Cow position:
Alignm length: 354
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 31

Conread position: 211-550
Cow position:
Alignm length: 364
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 321

Conread position: 211-550
Cow position:
Alignm length: 367
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 47

Conread position: 212-529
Cow position:
Alignm length: 345
Alignm identity: 244
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 118, 323

Conread position: 212-532
Cow position:
Alignm length: 344
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 29

Conread position: 212-532
Cow position:
Alignm length: 342
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 30

Conread position: 212-532
Cow position:
Alignm length: 346
Alignm identity: 246
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 119, 321

Conread position: 212-534
Cow position:
Alignm length: 346
Alignm identity: 246
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 115, 106

Conread position: 212-534
Cow position:
Alignm length: 347
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 318

Conread position: 212-550
Cow position:
Alignm length: 359
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 153

Conread position: 212-550
Cow position:
Alignm length: 364
Alignm identity: 256
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 115, 62

Conread position: 212-550
Cow position:
Alignm length: 363
Alignm identity: 255
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 114, 320

Conread position: 214-550
Cow position:
Alignm length: 348
Alignm identity: 239
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 112, 60

Conread position: 215-532
Cow position:
Alignm length: 333
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 45

Conread position: 216-534
Cow position:
Alignm length: 331
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 241

Conread position: 216-584
Cow position:
Alignm length: 394
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 317

Conread position: 217-550
Cow position:
Alignm length: 359
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 316

Conread position: 218-550
Cow position:
Alignm length: 353
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 308

Conread position: 219-549
Cow position:
Alignm length: 360
Alignm identity: 250
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 8, 102

Conread position: 219-550
Cow position:
Alignm length: 357
Alignm identity: 247
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 108, 97

Conread position: 222-550
Cow position:
Alignm length: 360
Alignm identity: 249
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 109, 8

Conread position: 223-532
Cow position:
Alignm length: 332
Alignm identity: 231
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 97, 160

Conread position: 230-544
Cow position:
Alignm length: 330
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 87

Conread position: 242-534
Cow position:
Alignm length: 315
Alignm identity: 225
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 84, 29

Conread position: 242-547
Cow position:
Alignm length: 333
Alignm identity: 245
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 88, 121

Conread position: 243-507
Cow position:
Alignm length: 281
Alignm identity: 212
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 90, 130

Conread position: 247-550
Cow position:
Alignm length: 327
Alignm identity: 235
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 83, 284

Conread position: 251-550
Cow position:
Alignm length: 317
Alignm identity: 229
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 78, 274

Conread position: 259-581
Cow position:
Alignm length: 335
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 213

Conread position: 267-534
Cow position:
Alignm length: 293
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 264

Conread position: 272-506
Cow position:
Alignm length: 245
Alignm identity: 183
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 61, 34

Conread position: 285-550
Cow position:
Alignm length: 290
Alignm identity: 208
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 45, 247

Conread position: 290-550
Cow position:
Alignm length: 280
Alignm identity: 207
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 42, 72

Conread position: 363-544
Cow position:
Alignm length: 183
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 66, 88

Conread position: 369-531
Cow position:
Alignm length: 175
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 39

Show alignments to all cow chromosomes.