Cow genome map

Conread name: rthg25_c11.y1

Conread position: 1-226
Cow position: chr21:9905580-9905803 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 68

Conread position: 1-469
Cow position: chr21:33982533-33983012 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 178

Conread position: 2-408
Cow position: chr21:957953-957526 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 133

Conread position: 3-144
Cow position: chr21:23348321-23348460 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 3-194
Cow position: chr21:27744307-27744105 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 84, 21

Conread position: 3-308
Cow position: chr21:15543960-15544248 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 219
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 297, 50

Conread position: 3-462
Cow position: chr21:45970901-45971353 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 21

Conread position: 3-469
Cow position: chr21:25345146-25344676 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 328
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 16, 210

Conread position: 4-391
Cow position: chr21:30222620-30222217 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 271
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 91, 197

Conread position: 5-216
Cow position: chr21:5218984-5218760 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 86, 5

Conread position: 5-273
Cow position: chr21:36508507-36508247 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 203
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 92, 45

Conread position: 5-355
Cow position: chr21:6998218-6997846 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 5-389
Cow position: chr21:27711955-27712341 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 271
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 213

Conread position: 5-467
Cow position: chr21:4281606-4282068 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 129

Conread position: 6-156
Cow position: chr21:38867101-38867249 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 19, 44

Conread position: 6-469
Cow position: chr21:20160955-20160482 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 48

Conread position: 7-152
Cow position: chr21:33244606-33244749 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 89

Conread position: 7-174
Cow position: chr21:18495490-18495321 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 24, 7

Conread position: 7-175
Cow position: chr21:32536666-32536495 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 89, 0

Conread position: 7-187
Cow position: chr21:8523906-8523728 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 90, 5

Conread position: 7-193
Cow position: chr21:16797127-16796932 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 88, 43

Conread position: 7-204
Cow position: chr21:24757212-24757011 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 87, 174

Conread position: 7-209
Cow position: chr21:8430821-8431035 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 7-213
Cow position: chr21:5406088-5405877 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 15, 94

Conread position: 7-227
Cow position: chr21:6292024-6291792 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 87, 0

Conread position: 7-248
Cow position: chr21:27677758-27677513 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 186
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 88, 177

Conread position: 7-253
Cow position: chr21:42145094-42144853 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 182
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 68, 111

Conread position: 7-271
Cow position: chr21:39319134-39319406 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 186
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 17, 44

Conread position: 7-299
Cow position: chr21:28919255-28919548 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 17, 136

Conread position: 7-299
Cow position: chr21:38720524-38720228 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 227
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 64, 115

Conread position: 7-361
Cow position: chr21:10673385-10673033 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 83

Conread position: 7-394
Cow position: chr21:47323-46911 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 286
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 17, 224

Conread position: 7-408
Cow position: chr21:9301500-9301067 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 282
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 88, 0

Conread position: 7-418
Cow position: chr21:10823814-10823402 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 297
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 271, 7

Conread position: 7-453
Cow position: chr21:40589205-40589669 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 207

Conread position: 7-462
Cow position: chr21:27863244-27863714 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 110

Conread position: 7-462
Cow position: chr21:42501327-42500838 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 477

Conread position: 7-463
Cow position: chr21:5238667-5238199 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 301
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 14, 307

Conread position: 7-466
Cow position: chr21:12154400-12153934 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 138

Conread position: 7-469
Cow position: chr21:938296-937847 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 326
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 78, 202

Conread position: 7-487
Cow position: chr21:3254409-3253946 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 322
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 18, 74

Conread position: 8-469
Cow position: chr21:49699762-49700238 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 274

Conread position: 9-463
Cow position: chr21:36763336-36762857 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 10-213
Cow position: chr21:20548093-20548299 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 87, 59

Conread position: 10-256
Cow position: chr21:42236709-42236472 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 88, 62

Conread position: 10-462
Cow position: chr21:41621400-41620924 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 200

Conread position: 11-194
Cow position: chr21:41738178-41737988 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 64, 13

Conread position: 11-207
Cow position: chr21:26828699-26828904 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 13, 176

Conread position: 11-209
Cow position: chr21:38482654-38482448 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 178

Conread position: 11-247
Cow position: chr21:40475773-40475532 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 185
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 13, 200

Conread position: 11-256
Cow position: chr21:40291483-40291723 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 187
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 80, 28

Conread position: 11-299
Cow position: chr21:20165911-20165617 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 205
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 29

Conread position: 11-462
Cow position: chr21:643591-643142 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 308
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 80, 39

Conread position: 11-462
Cow position: chr21:27521070-27521520 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 29

Conread position: 12-213
Cow position: chr21:44214382-44214188 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 85

Conread position: 12-299
Cow position: chr21:13395851-13395574 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 215
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 145, 41

Conread position: 12-457
Cow position: chr21:33791127-33791558 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 304
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 229, 46

Conread position: 13-213
Cow position: chr21:21940141-21940346 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 13-213
Cow position: chr21:43655971-43655763 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 86, 120

Conread position: 13-448
Cow position: chr21:802054-802475 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 188

Conread position: 13-462
Cow position: chr21:34738840-34738403 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 36

Conread position: 14-184
Cow position: chr21:29011708-29011880 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 73, 101

Conread position: 14-191
Cow position: chr21:8506279-8506463 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 14-191
Cow position: chr21:8509167-8509351 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 14-192
Cow position: chr21:36121497-36121309 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 72, 46

Conread position: 14-203
Cow position: chr21:4109045-4108846 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 14-203
Cow position: chr21:15869955-15869761 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 10, 17

Conread position: 14-213
Cow position: chr21:31279521-31279317 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 14-236
Cow position: chr21:25014772-25014982 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 84, 115

Conread position: 14-237
Cow position: chr21:30938397-30938629 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 10, 199

Conread position: 14-273
Cow position: chr21:31159654-31159409 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 199
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 83, 53

Conread position: 14-273
Cow position: chr21:40266393-40266130 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 199
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 10, 183

Conread position: 14-299
Cow position: chr21:976881-977169 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 214
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 44

Conread position: 14-299
Cow position: chr21:5465015-5464723 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 215
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 85, 192

Conread position: 14-299
Cow position: chr21:11779270-11779553 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 207
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 75, 155

Conread position: 14-299
Cow position: chr21:30835634-30835339 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 213
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 56, 195

Conread position: 14-299
Cow position: chr21:37014157-37014426 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 254, 92

Conread position: 14-307
Cow position: chr21:21907173-21907458 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 29, 164

Conread position: 14-442
Cow position: chr21:32339477-32339912 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 188

Conread position: 14-453
Cow position: chr21:47464851-47465307 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 145

Conread position: 14-458
Cow position: chr21:5427195-5426755 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 79

Conread position: 14-458
Cow position: chr21:32559103-32559545 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 187

Conread position: 14-460
Cow position: chr21:38449184-38449645 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 162

Conread position: 14-461
Cow position: chr21:31253797-31253341 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 330
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 63, 21

Conread position: 14-462
Cow position: chr21:6713256-6713733 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 328
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 73, 197

Conread position: 14-462
Cow position: chr21:44251572-44252021 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 37

Conread position: 14-462
Cow position: chr21:46848865-46849318 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 172

Conread position: 14-466
Cow position: chr21:4099115-4098676 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 302
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 224, 36

Conread position: 14-469
Cow position: chr21:47761039-47760575 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 212

Conread position: 14-478
Cow position: chr21:15911646-15911188 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 338
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 227, 32

Conread position: 14-485
Cow position: chr21:10004615-10005103 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 162

Conread position: 14-490
Cow position: chr21:45356083-45355612 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 55

Conread position: 14-507
Cow position: chr21:14464854-14464337 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 357

Conread position: 14-544
Cow position: chr21:6051773-6051241 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 195

Conread position: 15-193
Cow position: chr21:12298854-12298675 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 15-197
Cow position: chr21:15012698-15012516 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 80, 35

Conread position: 15-202
Cow position: chr21:46451705-46451882 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 15-210
Cow position: chr21:29418840-29418636 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 21, 174

Conread position: 15-273
Cow position: chr21:41917972-41918240 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 201
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 72, 50

Conread position: 15-405
Cow position: chr21:12461702-12462109 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 190

Conread position: 15-436
Cow position: chr21:21169240-21169664 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 305
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 10, 41

Conread position: 15-447
Cow position: chr21:17184185-17183741 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 204

Conread position: 15-461
Cow position: chr21:25764883-25764441 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 315
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 225, 54

Conread position: 15-461
Cow position: chr21:37299727-37299271 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 310
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 38, 64

Conread position: 15-462
Cow position: chr21:38901030-38900578 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 88

Conread position: 15-469
Cow position: chr21:11739854-11740334 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 326
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 60, 14

Conread position: 15-477
Cow position: chr21:23587139-23586667 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 80

Conread position: 16-158
Cow position: chr21:18497733-18497878 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 16-180
Cow position: chr21:21159069-21158905 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 16-197
Cow position: chr21:26147325-26147155 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 16-199
Cow position: chr21:438822-438637 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 81, 0

Conread position: 16-213
Cow position: chr21:20174578-20174379 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 16-213
Cow position: chr21:30145367-30145567 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 68, 117

Conread position: 16-298
Cow position: chr21:71852-71563 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 199
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 73, 122

Conread position: 16-459
Cow position: chr21:18941586-18942021 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 298
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 9, 46

Conread position: 16-461
Cow position: chr21:641850-641390 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 188

Conread position: 16-462
Cow position: chr21:7673379-7672938 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 295
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 80, 160

Conread position: 17-184
Cow position: chr21:2294275-2294112 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 80, 9

Conread position: 17-213
Cow position: chr21:26735662-26735470 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 86, 135

Conread position: 17-273
Cow position: chr21:44724111-44724359 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 78, 128

Conread position: 17-468
Cow position: chr21:4400058-4399598 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 53

Conread position: 17-544
Cow position: chr21:14452498-14451941 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 194

Conread position: 18-198
Cow position: chr21:6945624-6945452 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 64, 0

Conread position: 18-203
Cow position: chr21:8713693-8713889 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 18-203
Cow position: chr21:42189496-42189686 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 81, 0

Conread position: 18-205
Cow position: chr21:745434-745244 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 73, 123

Conread position: 18-209
Cow position: chr21:31658890-31659082 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 77, 160

Conread position: 18-248
Cow position: chr21:46612540-46612762 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 28

Conread position: 18-272
Cow position: chr21:29658538-29658286 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 73, 140

Conread position: 18-299
Cow position: chr21:41140451-41140741 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 203
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 73, 176

Conread position: 18-460
Cow position: chr21:3763487-3763930 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 32

Conread position: 18-464
Cow position: chr21:3585100-3585553 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 193

Conread position: 18-469
Cow position: chr21:17512038-17511574 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 91

Conread position: 18-469
Cow position: chr21:38918466-38918013 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 175

Conread position: 18-483
Cow position: chr21:37706147-37706622 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 193

Conread position: 19-208
Cow position: chr21:30658124-30657936 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 19-213
Cow position: chr21:28882446-28882240 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 19-244
Cow position: chr21:37837814-37838031 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 5, 64

Conread position: 19-299
Cow position: chr21:1511549-1511267 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 67, 163

Conread position: 19-299
Cow position: chr21:17890566-17890279 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 206
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 76, 189

Conread position: 19-432
Cow position: chr21:28244731-28244311 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 184

Conread position: 19-461
Cow position: chr21:46972902-46973321 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 291
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 17, 33

Conread position: 19-462
Cow position: chr21:18568374-18568846 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 327
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 76, 188

Conread position: 19-466
Cow position: chr21:27229540-27229994 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 311
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 78, 71

Conread position: 19-469
Cow position: chr21:82322-81868 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 55

Conread position: 19-469
Cow position: chr21:23535976-23535511 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 326
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 39, 203

Conread position: 20-202
Cow position: chr21:35252709-35252519 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 20-213
Cow position: chr21:48482268-48482467 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 65, 171

Conread position: 20-214
Cow position: chr21:33413835-33414027 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 34, 69

Conread position: 20-306
Cow position: chr21:28030541-28030257 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 204
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 77, 33

Conread position: 20-469
Cow position: chr21:22718521-22718983 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 151

Conread position: 22-195
Cow position: chr21:30970195-30970014 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 65, 39

Conread position: 22-197
Cow position: chr21:49353884-49353713 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 22-199
Cow position: chr21:37495684-37495872 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 22-203
Cow position: chr21:42017340-42017532 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 22-299
Cow position: chr21:22209983-22210268 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 64, 199

Conread position: 22-469
Cow position: chr21:30231436-30231905 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 82

Conread position: 22-469
Cow position: chr21:47763866-47764314 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 38

Conread position: 23-184
Cow position: chr21:7460864-7460697 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 23-197
Cow position: chr21:11353323-11353137 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 23-198
Cow position: chr21:2785242-2785417 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 169, 173

Conread position: 23-209
Cow position: chr21:30977009-30977192 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 149
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 64, 111

Conread position: 23-462
Cow position: chr21:23673004-23672549 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 42

Conread position: 23-462
Cow position: chr21:29014658-29015087 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 159

Conread position: 23-463
Cow position: chr21:42135360-42135820 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 202

Conread position: 23-466
Cow position: chr21:24797914-24797496 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 161

Conread position: 24-253
Cow position: chr21:46809506-46809744 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 61, 50

Conread position: 26-479
Cow position: chr21:11644710-11645180 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 213

Conread position: 28-292
Cow position: chr21:24266307-24266576 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 63, 184

Conread position: 30-459
Cow position: chr21:17193496-17193952 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 205

Conread position: 30-474
Cow position: chr21:41580007-41579545 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 44

Conread position: 31-202
Cow position: chr21:18783215-18783397 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 31-348
Cow position: chr21:41107525-41107847 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 213
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 41, 94

Conread position: 31-464
Cow position: chr21:8351043-8351501 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 256

Conread position: 35-441
Cow position: chr21:28810028-28810437 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 291
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 140, 52

Conread position: 38-188
Cow position: chr21:7424769-7424928 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 38-462
Cow position: chr21:3360772-3361209 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 169

Conread position: 39-299
Cow position: chr21:10410466-10410196 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 138

Conread position: 42-238
Cow position: chr21:7221108-7221298 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 20, 64

Conread position: 52-213
Cow position: chr21:6735963-6736128 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 56-284
Cow position: chr21:7768661-7768429 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 38, 148

Conread position: 56-299
Cow position: chr21:44860905-44861135 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 227, 12

Conread position: 56-459
Cow position: chr21:17642763-17643162 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 62

Conread position: 56-469
Cow position: chr21:9416476-9416040 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 151

Conread position: 56-469
Cow position: chr21:19259042-19258624 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 71-464
Cow position: chr21:23321876-23322278 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 24

Conread position: 73-405
Cow position: chr21:11360229-11359899 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 250
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 7, 68

Conread position: 78-469
Cow position: chr21:42413901-42414304 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 115

Conread position: 80-248
Cow position: chr21:42562821-42562664 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 95, 0

Conread position: 81-464
Cow position: chr21:28626431-28626044 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 283
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 18, 96

Conread position: 83-462
Cow position: chr21:44671935-44671558 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 79

Conread position: 85-357
Cow position: chr21:8527295-8527571 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 164
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 187, 127

Conread position: 85-427
Cow position: chr21:32297329-32297671 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 232
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 10, 126

Conread position: 85-451
Cow position: chr21:37344913-37345286 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 17

Conread position: 87-441
Cow position: chr21:8452092-8451720 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 253
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 76, 119

Conread position: 87-441
Cow position: chr21:26245102-26244758 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 113

Conread position: 87-462
Cow position: chr21:39888551-39888939 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 274
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 53, 88

Conread position: 87-475
Cow position: chr21:13584875-13585265 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 284
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 184, 16

Conread position: 87-488
Cow position: chr21:10118754-10118331 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 193

Conread position: 88-242
Cow position: chr21:22939955-22939804 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 89, 7

Conread position: 88-250
Cow position: chr21:41610355-41610197 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 47, 15

Conread position: 88-462
Cow position: chr21:29069141-29069524 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 271
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 85, 7

Conread position: 90-203
Cow position: chr21:5214532-5214419 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 90-468
Cow position: chr21:396050-395675 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 5

Conread position: 91-213
Cow position: chr21:265806-265685 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 91-245
Cow position: chr21:46470367-46470222 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 85

Conread position: 91-248
Cow position: chr21:44592026-44592177 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 118, 0

Conread position: 91-294
Cow position: chr21:46132757-46132559 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 195, 108

Conread position: 91-299
Cow position: chr21:28237524-28237736 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 7, 72

Conread position: 91-420
Cow position: chr21:24642696-24642365 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 40

Conread position: 91-456
Cow position: chr21:28924292-28923937 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 108

Conread position: 91-477
Cow position: chr21:15976816-15976437 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 288
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 13, 56

Conread position: 92-299
Cow position: chr21:30256092-30256288 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 164
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 146, 62

Conread position: 93-246
Cow position: chr21:30119875-30119727 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 124
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 146, 106

Conread position: 93-316
Cow position: chr21:10538073-10538291 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 172
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 5, 107

Conread position: 93-469
Cow position: chr21:28429625-28429247 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 103

Conread position: 93-469
Cow position: chr21:42384688-42384303 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 10

Conread position: 94-197
Cow position: chr21:37361062-37361165 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 94-299
Cow position: chr21:734769-734572 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 178, 62

Conread position: 94-460
Cow position: chr21:36795783-36795409 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 102

Conread position: 94-469
Cow position: chr21:15584239-15584605 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 266
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 147, 105

Conread position: 95-197
Cow position: chr21:21479124-21479224 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 95-299
Cow position: chr21:7377747-7377951 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 161
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 143, 115

Conread position: 95-481
Cow position: chr21:30606917-30607298 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 21

Conread position: 96-193
Cow position: chr21:40305121-40305024 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 96-207
Cow position: chr21:7493095-7493206 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 96-244
Cow position: chr21:8213103-8213243 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 142, 79

Conread position: 96-253
Cow position: chr21:17063099-17062949 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 142, 79

Conread position: 96-314
Cow position: chr21:26567600-26567821 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 152
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 158, 103

Conread position: 96-355
Cow position: chr21:6388177-6387935 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 119, 0

Conread position: 96-469
Cow position: chr21:41974200-41974581 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 80

Conread position: 97-209
Cow position: chr21:13225892-13225780 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 97-215
Cow position: chr21:41051065-41050948 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 97-222
Cow position: chr21:8686966-8687090 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 118, 0

Conread position: 97-273
Cow position: chr21:3400655-3400828 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 141, 68

Conread position: 97-273
Cow position: chr21:41827981-41828160 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 89, 65

Conread position: 97-435
Cow position: chr21:10001252-10000912 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 75

Conread position: 97-464
Cow position: chr21:3818385-3818019 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 32

Conread position: 97-469
Cow position: chr21:27568996-27569360 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 257
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 159, 68

Conread position: 97-477
Cow position: chr21:25383203-25382798 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 286
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 141, 92

Conread position: 97-514
Cow position: chr21:33896-33478 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 102

Conread position: 97-542
Cow position: chr21:41597988-41597541 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 115

Conread position: 98-269
Cow position: chr21:7584026-7583856 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 145, 99

Conread position: 98-442
Cow position: chr21:18790390-18790731 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 55

Conread position: 98-442
Cow position: chr21:33563179-33562840 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 63

Conread position: 98-446
Cow position: chr21:44825710-44826062 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 243
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 71, 134

Conread position: 98-460
Cow position: chr21:13164035-13163700 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 260
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 240, 114

Conread position: 98-462
Cow position: chr21:6624333-6623948 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 268
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 170, 84

Conread position: 99-206
Cow position: chr21:43336781-43336674 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 99-258
Cow position: chr21:17265825-17265981 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 50, 17

Conread position: 99-392
Cow position: chr21:2657984-2657690 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 202
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 136, 115

Conread position: 100-212
Cow position: chr21:19927093-19927201 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 100-299
Cow position: chr21:27406070-27406277 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 99, 196

Conread position: 100-342
Cow position: chr21:7823538-7823298 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 54

Conread position: 100-445
Cow position: chr21:8235388-8235722 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 228
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 174, 76

Conread position: 105-213
Cow position: chr21:35647659-35647767 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 105-360
Cow position: chr21:42022444-42022193 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 197, 113

Conread position: 105-468
Cow position: chr21:38121270-38120906 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 258
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 130, 94

Conread position: 105-469
Cow position: chr21:45915549-45915906 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 250
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 170, 70

Conread position: 106-462
Cow position: chr21:32237447-32237102 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 247
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 114, 70

Conread position: 106-469
Cow position: chr21:8125637-8125998 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 253
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 133, 85

Conread position: 106-542
Cow position: chr21:12801579-12802021 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 90

Conread position: 108-273
Cow position: chr21:23460299-23460146 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 108-389
Cow position: chr21:36789962-36789671 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 22, 92

Conread position: 119-469
Cow position: chr21:39401745-39401398 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 256
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 152, 37

Conread position: 124-451
Cow position: chr21:15611290-15610971 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 242
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 117, 64

Conread position: 125-343
Cow position: chr21:40432594-40432368 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 149, 74

Conread position: 126-469
Cow position: chr21:43357108-43357461 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 264
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 113, 68

Conread position: 160-449
Cow position: chr21:46829158-46829451 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 208
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 139, 82

Conread position: 160-469
Cow position: chr21:24607500-24607183 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 231
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 80, 39

Conread position: 169-469
Cow position: chr21:10727382-10727079 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 219
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 72, 46

Conread position: 173-453
Cow position: chr21:6102160-6102455 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 214
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 98, 26

Conread position: 185-466
Cow position: chr21:3236619-3236333 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 218
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 56, 11

Conread position: 207-542
Cow position: chr21:3047750-3047424 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 240
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 44, 150

Conread position: 208-456
Cow position: chr21:21480112-21480371 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 66, 251

Conread position: 302-475
Cow position: chr21:13395512-13395348 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 312-544
Cow position: chr21:24759023-24758801 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 25, 0

Show alignments to all cow chromosomes.