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Cow genome map

           
Conread name:
           
rthg25_c11.y1
        

               
Conread position:
               
1-195
               

               
Cow position:
               
chr22:10468722-10468523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
86, 22
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr22:4156598-4156924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
20, 211
               

               
Conread position:
               
1-441
               

               
Cow position:
               
chr22:7165183-7164712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
16, 49
               

               
Conread position:
               
1-462
               

               
Cow position:
               
chr22:22860695-22861173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 191
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr22:21746850-21746375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 21
               

               
Conread position:
               
1-469
               

               
Cow position:
               
chr22:37145538-37145077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 53
               

               
Conread position:
               
2-178
               

               
Cow position:
               
chr22:11836861-11837035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
22, 5
               

               
Conread position:
               
2-200
               

               
Cow position:
               
chr22:45771811-45772017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr22:31599645-31599329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
90, 154
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr22:2524160-2523763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
163, 21
               

               
Conread position:
               
3-208
               

               
Cow position:
               
chr22:12997627-12997834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
84, 164
               

               
Conread position:
               
3-299
               

               
Cow position:
               
chr22:27828588-27828293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
92, 21
               

               
Conread position:
               
3-388
               

               
Cow position:
               
chr22:36432762-36433158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
84, 21
               

               
Conread position:
               
4-186
               

               
Cow position:
               
chr22:11039671-11039476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
4-464
               

               
Cow position:
               
chr22:1326630-1326155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 47
               

               
Conread position:
               
4-469
               

               
Cow position:
               
chr22:40048770-40048294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
18, 174
               

               
Conread position:
               
5-209
               

               
Cow position:
               
chr22:4736239-4736021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
5-293
               

               
Cow position:
               
chr22:10553489-10553770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 9
               

               
Conread position:
               
5-299
               

               
Cow position:
               
chr22:17652642-17652342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
5-437
               

               
Cow position:
               
chr22:40387361-40386935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
90, 199
               

               
Conread position:
               
5-445
               

               
Cow position:
               
chr22:40349550-40349105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 9
               

               
Conread position:
               
5-462
               

               
Cow position:
               
chr22:15490866-15490397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 203
               

               
Conread position:
               
5-468
               

               
Cow position:
               
chr22:4075675-4076166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 204
               

               
Conread position:
               
6-273
               

               
Cow position:
               
chr22:28672343-28672083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 33
               

               
Conread position:
               
6-462
               

               
Cow position:
               
chr22:644572-645022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 47
               

               
Conread position:
               
6-464
               

               
Cow position:
               
chr22:7154084-7153625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
107, 87
               

               
Conread position:
               
6-466
               

               
Cow position:
               
chr22:6720874-6721331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
91, 7
               

               
Conread position:
               
6-466
               

               
Cow position:
               
chr22:29642322-29641843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 156
               

               
Conread position:
               
6-469
               

               
Cow position:
               
chr22:29954807-29955268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 16
               

               
Conread position:
               
7-190
               

               
Cow position:
               
chr22:25312723-25312526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
7-194
               

               
Cow position:
               
chr22:30176929-30176731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 183
               

               
Conread position:
               
7-208
               

               
Cow position:
               
chr22:23630147-23630352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
17, 49
               

               
Conread position:
               
7-209
               

               
Cow position:
               
chr22:12929070-12929282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
84, 118
               

               
Conread position:
               
7-248
               

               
Cow position:
               
chr22:3470497-3470251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
79, 217
               

               
Conread position:
               
7-294
               

               
Cow position:
               
chr22:530369-530653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
18, 178
               

               
Conread position:
               
7-294
               

               
Cow position:
               
chr22:12749705-12749985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
232, 43
               

               
Conread position:
               
7-359
               

               
Cow position:
               
chr22:6096808-6097188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
87, 201
               

               
Conread position:
               
7-404
               

               
Cow position:
               
chr22:30999098-30998693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
48, 204
               

               
Conread position:
               
7-456
               

               
Cow position:
               
chr22:7913662-7913222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
20, 5
               

               
Conread position:
               
7-461
               

               
Cow position:
               
chr22:27577954-27577472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
13, 184
               

               
Conread position:
               
7-462
               

               
Cow position:
               
chr22:4583768-4583308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
84, 19
               

               
Conread position:
               
7-462
               

               
Cow position:
               
chr22:8733137-8733584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 99
               

               
Conread position:
               
7-462
               

               
Cow position:
               
chr22:41044701-41045176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
155, 43
               

               
Conread position:
               
7-466
               

               
Cow position:
               
chr22:6754055-6754521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 219
               

               
Conread position:
               
7-466
               

               
Cow position:
               
chr22:12573413-12572937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 179
               

               
Conread position:
               
7-469
               

               
Cow position:
               
chr22:1309530-1309996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
81, 41
               

               
Conread position:
               
7-469
               

               
Cow position:
               
chr22:4060740-4061208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
80, 323
               

               
Conread position:
               
7-469
               

               
Cow position:
               
chr22:5291063-5290575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 205
               

               
Conread position:
               
7-469
               

               
Cow position:
               
chr22:9372735-9372251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 195
               

               
Conread position:
               
7-469
               

               
Cow position:
               
chr22:25943667-25943212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 75
               

               
Conread position:
               
7-470
               

               
Cow position:
               
chr22:14142916-14143376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
87, 126
               

               
Conread position:
               
7-506
               

               
Cow position:
               
chr22:15567814-15568324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
88, 244
               

               
Conread position:
               
8-203
               

               
Cow position:
               
chr22:35578568-35578773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
16, 121
               

               
Conread position:
               
8-274
               

               
Cow position:
               
chr22:8540082-8539826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
86, 156
               

               
Conread position:
               
9-192
               

               
Cow position:
               
chr22:8447114-8446929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
9-208
               

               
Cow position:
               
chr22:33948771-33948974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
82, 146
               

               
Conread position:
               
9-209
               

               
Cow position:
               
chr22:14641651-14641859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
9-247
               

               
Cow position:
               
chr22:4656840-4657078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
86, 195
               

               
Conread position:
               
9-469
               

               
Cow position:
               
chr22:42612647-42612189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 54
               

               
Conread position:
               
10-187
               

               
Cow position:
               
chr22:10763983-10763803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
10-207
               

               
Cow position:
               
chr22:1830249-1830049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
12, 189
               

               
Conread position:
               
10-469
               

               
Cow position:
               
chr22:18926562-18926082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 33
               

               
Conread position:
               
10-485
               

               
Cow position:
               
chr22:9127604-9127122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 58
               

               
Conread position:
               
11-209
               

               
Cow position:
               
chr22:9279225-9279025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
68, 165
               

               
Conread position:
               
11-218
               

               
Cow position:
               
chr22:45012558-45012763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
86, 157
               

               
Conread position:
               
11-299
               

               
Cow position:
               
chr22:43237197-43237498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
31, 203
               

               
Conread position:
               
11-336
               

               
Cow position:
               
chr22:27275670-27275335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 210
               

               
Conread position:
               
11-460
               

               
Cow position:
               
chr22:8883215-8882764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 191
               

               
Conread position:
               
11-466
               

               
Cow position:
               
chr22:11696990-11697475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
13, 40
               

               
Conread position:
               
11-466
               

               
Cow position:
               
chr22:36539454-36539932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 223
               

               
Conread position:
               
12-297
               

               
Cow position:
               
chr22:5837464-5837179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
103, 132
               

               
Conread position:
               
12-297
               

               
Cow position:
               
chr22:25690074-25690370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
10, 185
               

               
Conread position:
               
12-299
               

               
Cow position:
               
chr22:24916033-24915746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
38, 53
               

               
Conread position:
               
12-460
               

               
Cow position:
               
chr22:23249533-23249972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 90
               

               
Conread position:
               
12-462
               

               
Cow position:
               
chr22:40374809-40374344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 203
               

               
Conread position:
               
12-464
               

               
Cow position:
               
chr22:26183978-26184424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
13-208
               

               
Cow position:
               
chr22:30362495-30362691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
75, 167
               

               
Conread position:
               
13-273
               

               
Cow position:
               
chr22:35029461-35029204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
226, 82
               

               
Conread position:
               
13-278
               

               
Cow position:
               
chr22:5712786-5712519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
78, 37
               

               
Conread position:
               
13-469
               

               
Cow position:
               
chr22:34895158-34894703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
82, 31
               

               
Conread position:
               
14-194
               

               
Cow position:
               
chr22:16916737-16916916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
10, 36
               

               
Conread position:
               
14-194
               

               
Cow position:
               
chr22:26268050-26267860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
14-203
               

               
Cow position:
               
chr22:12777183-12777373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
14-203
               

               
Cow position:
               
chr22:23265447-23265648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
14-209
               

               
Cow position:
               
chr22:26417481-26417281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
14-236
               

               
Cow position:
               
chr22:2704501-2704270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
10, 206
               

               
Conread position:
               
14-248
               

               
Cow position:
               
chr22:40870031-40869798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
71, 182
               

               
Conread position:
               
14-273
               

               
Cow position:
               
chr22:8287381-8287130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
82, 164
               

               
Conread position:
               
14-277
               

               
Cow position:
               
chr22:12188273-12188547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
78, 200
               

               
Conread position:
               
14-277
               

               
Cow position:
               
chr22:12195359-12195634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
78, 201
               

               
Conread position:
               
14-299
               

               
Cow position:
               
chr22:6852379-6852674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
10, 187
               

               
Conread position:
               
14-299
               

               
Cow position:
               
chr22:14372368-14372095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
85, 181
               

               
Conread position:
               
14-299
               

               
Cow position:
               
chr22:39215411-39215707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
73, 196
               

               
Conread position:
               
14-314
               

               
Cow position:
               
chr22:12678220-12678526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 208
               

               
Conread position:
               
14-396
               

               
Cow position:
               
chr22:12316008-12315615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 146
               

               
Conread position:
               
14-412
               

               
Cow position:
               
chr22:12313621-12313207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 139
               

               
Conread position:
               
14-441
               

               
Cow position:
               
chr22:5384835-5384414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 60
               

               
Conread position:
               
14-456
               

               
Cow position:
               
chr22:30269602-30269159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 54
               

               
Conread position:
               
14-462
               

               
Cow position:
               
chr22:14091019-14091493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
10, 221
               

               
Conread position:
               
14-462
               

               
Cow position:
               
chr22:14178631-14179093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 203
               

               
Conread position:
               
14-462
               

               
Cow position:
               
chr22:14844745-14844312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 28
               

               
Conread position:
               
14-462
               

               
Cow position:
               
chr22:28937740-28938168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 107
               

               
Conread position:
               
14-469
               

               
Cow position:
               
chr22:11613627-11613159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
21, 188
               

               
Conread position:
               
14-469
               

               
Cow position:
               
chr22:25361678-25361222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
81, 68
               

               
Conread position:
               
14-469
               

               
Cow position:
               
chr22:38939750-38940218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 81
               

               
Conread position:
               
14-487
               

               
Cow position:
               
chr22:534690-534207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 68
               

               
Conread position:
               
15-182
               

               
Cow position:
               
chr22:11221374-11221209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
152, 79
               

               
Conread position:
               
15-193
               

               
Cow position:
               
chr22:34668515-34668323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
15-202
               

               
Cow position:
               
chr22:4054403-4054584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
15-202
               

               
Cow position:
               
chr22:16813995-16813803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
79, 139
               

               
Conread position:
               
15-207
               

               
Cow position:
               
chr22:2408928-2409132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
15-212
               

               
Cow position:
               
chr22:10402749-10402951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 31
               

               
Conread position:
               
15-246
               

               
Cow position:
               
chr22:12157649-12157877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
84, 39
               

               
Conread position:
               
15-299
               

               
Cow position:
               
chr22:8090335-8090619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
72, 93
               

               
Conread position:
               
15-314
               

               
Cow position:
               
chr22:24903791-24903481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
80, 210
               

               
Conread position:
               
15-395
               

               
Cow position:
               
chr22:44410916-44410541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 203
               

               
Conread position:
               
15-414
               

               
Cow position:
               
chr22:3534131-3533734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
66, 167
               

               
Conread position:
               
15-460
               

               
Cow position:
               
chr22:3325787-3325321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 152
               

               
Conread position:
               
15-460
               

               
Cow position:
               
chr22:44717920-44717451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
77, 199
               

               
Conread position:
               
15-466
               

               
Cow position:
               
chr22:29441083-29441520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
284, 55
               

               
Conread position:
               
15-468
               

               
Cow position:
               
chr22:37202048-37201589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 107
               

               
Conread position:
               
15-509
               

               
Cow position:
               
chr22:27224309-27223822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 36
               

               
Conread position:
               
16-145
               

               
Cow position:
               
chr22:13849068-13849193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
16-210
               

               
Cow position:
               
chr22:2876599-2876801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
16-252
               

               
Cow position:
               
chr22:16806786-16806556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
67, 121
               

               
Conread position:
               
16-253
               

               
Cow position:
               
chr22:3945553-3945338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
16-264
               

               
Cow position:
               
chr22:10557470-10557227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
86, 14
               

               
Conread position:
               
16-299
               

               
Cow position:
               
chr22:27508840-27508559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
174, 74
               

               
Conread position:
               
16-299
               

               
Cow position:
               
chr22:37030326-37030612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
79, 15
               

               
Conread position:
               
16-362
               

               
Cow position:
               
chr22:33399291-33399647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 10
               

               
Conread position:
               
16-405
               

               
Cow position:
               
chr22:41854101-41853691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 188
               

               
Conread position:
               
16-451
               

               
Cow position:
               
chr22:39696496-39696045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
70, 121
               

               
Conread position:
               
16-466
               

               
Cow position:
               
chr22:26339963-26339493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 203
               

               
Conread position:
               
16-469
               

               
Cow position:
               
chr22:21890167-21890628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 32
               

               
Conread position:
               
17-197
               

               
Cow position:
               
chr22:45788804-45788620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
39, 117
               

               
Conread position:
               
17-200
               

               
Cow position:
               
chr22:36209453-36209260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 13
               

               
Conread position:
               
17-226
               

               
Cow position:
               
chr22:24890418-24890202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
78, 180
               

               
Conread position:
               
17-239
               

               
Cow position:
               
chr22:1714664-1714891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
77, 189
               

               
Conread position:
               
17-299
               

               
Cow position:
               
chr22:15668285-15668564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
81, 161
               

               
Conread position:
               
17-321
               

               
Cow position:
               
chr22:10416424-10416116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 60
               

               
Conread position:
               
17-420
               

               
Cow position:
               
chr22:6149190-6149606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 174
               

               
Conread position:
               
17-460
               

               
Cow position:
               
chr22:13286646-13286183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 178
               

               
Conread position:
               
17-462
               

               
Cow position:
               
chr22:15038982-15039448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
35, 194
               

               
Conread position:
               
18-197
               

               
Cow position:
               
chr22:15695536-15695715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
60, 78
               

               
Conread position:
               
18-198
               

               
Cow position:
               
chr22:16564343-16564158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
6, 113
               

               
Conread position:
               
18-203
               

               
Cow position:
               
chr22:16340052-16339859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
18-207
               

               
Cow position:
               
chr22:43730479-43730284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
18-208
               

               
Cow position:
               
chr22:1821392-1821586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 89
               

               
Conread position:
               
18-218
               

               
Cow position:
               
chr22:10913856-10913652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
6, 33
               

               
Conread position:
               
18-242
               

               
Cow position:
               
chr22:14600136-14600363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
69, 117
               

               
Conread position:
               
18-247
               

               
Cow position:
               
chr22:23372662-23372899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
66, 105
               

               
Conread position:
               
18-272
               

               
Cow position:
               
chr22:19376871-19376604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 193
               

               
Conread position:
               
18-273
               

               
Cow position:
               
chr22:16541452-16541713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
77, 192
               

               
Conread position:
               
18-299
               

               
Cow position:
               
chr22:23735814-23736102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
6, 169
               

               
Conread position:
               
18-299
               

               
Cow position:
               
chr22:25809084-25809361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
73, 96
               

               
Conread position:
               
18-299
               

               
Cow position:
               
chr22:27681921-27681625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
77, 189
               

               
Conread position:
               
18-315
               

               
Cow position:
               
chr22:25254372-25254073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
6, 182
               

               
Conread position:
               
18-369
               

               
Cow position:
               
chr22:32698961-32698587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
6, 171
               

               
Conread position:
               
18-386
               

               
Cow position:
               
chr22:16291736-16292107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
193, 77
               

               
Conread position:
               
18-415
               

               
Cow position:
               
chr22:11601232-11600818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
77, 157
               

               
Conread position:
               
18-437
               

               
Cow position:
               
chr22:16533269-16532843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 36
               

               
Conread position:
               
18-437
               

               
Cow position:
               
chr22:37139625-37139210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
77, 32
               

               
Conread position:
               
18-462
               

               
Cow position:
               
chr22:25742769-25743215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 32
               

               
Conread position:
               
18-463
               

               
Cow position:
               
chr22:5595611-5596052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 164
               

               
Conread position:
               
18-469
               

               
Cow position:
               
chr22:15950193-15950646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
79, 32
               

               
Conread position:
               
18-469
               

               
Cow position:
               
chr22:32326996-32326532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
72, 284
               

               
Conread position:
               
18-469
               

               
Cow position:
               
chr22:38978039-38977579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
47, 206
               

               
Conread position:
               
18-544
               

               
Cow position:
               
chr22:22613299-22612771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 101
               

               
Conread position:
               
19-180
               

               
Cow position:
               
chr22:1074463-1074291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
19-202
               

               
Cow position:
               
chr22:26189068-26188875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
19-206
               

               
Cow position:
               
chr22:3257471-3257659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 160
               

               
Conread position:
               
19-244
               

               
Cow position:
               
chr22:12447644-12447425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
191, 0
               

               
Conread position:
               
19-273
               

               
Cow position:
               
chr22:6289303-6289557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
72, 189
               

               
Conread position:
               
19-453
               

               
Cow position:
               
chr22:10295224-10294797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 135
               

               
Conread position:
               
19-461
               

               
Cow position:
               
chr22:6610162-6610613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 108
               

               
Conread position:
               
19-461
               

               
Cow position:
               
chr22:10303211-10302749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 187
               

               
Conread position:
               
19-462
               

               
Cow position:
               
chr22:25247105-25246648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 182
               

               
Conread position:
               
19-463
               

               
Cow position:
               
chr22:5016686-5016253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 148
               

               
Conread position:
               
19-469
               

               
Cow position:
               
chr22:4563552-4563093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
79, 179
               

               
Conread position:
               
19-469
               

               
Cow position:
               
chr22:10122564-10122119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 71
               

               
Conread position:
               
19-469
               

               
Cow position:
               
chr22:33485429-33485872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
71, 31
               

               
Conread position:
               
19-475
               

               
Cow position:
               
chr22:11131065-11130602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 197
               

               
Conread position:
               
19-504
               

               
Cow position:
               
chr22:6709594-6710078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
95, 221
               

               
Conread position:
               
20-190
               

               
Cow position:
               
chr22:12902661-12902837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
75, 163
               

               
Conread position:
               
20-245
               

               
Cow position:
               
chr22:18966966-18967191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
72, 30
               

               
Conread position:
               
22-193
               

               
Cow position:
               
chr22:3540927-3541104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
73, 28
               

               
Conread position:
               
22-202
               

               
Cow position:
               
chr22:14644026-14643841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
22-209
               

               
Cow position:
               
chr22:44684668-44684487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
58, 28
               

               
Conread position:
               
22-263
               

               
Cow position:
               
chr22:23675780-23676017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
75, 170
               

               
Conread position:
               
22-365
               

               
Cow position:
               
chr22:12389295-12388922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
73, 204
               

               
Conread position:
               
22-395
               

               
Cow position:
               
chr22:1849268-1848869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 175
               

               
Conread position:
               
22-437
               

               
Cow position:
               
chr22:20862571-20862986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
185, 127
               

               
Conread position:
               
22-462
               

               
Cow position:
               
chr22:20627026-20626579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 181
               

               
Conread position:
               
23-203
               

               
Cow position:
               
chr22:14676880-14676689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
23-208
               

               
Cow position:
               
chr22:6360001-6360185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
23-209
               

               
Cow position:
               
chr22:1776255-1776057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
23-273
               

               
Cow position:
               
chr22:13866860-13866600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
68, 202
               

               
Conread position:
               
23-318
               

               
Cow position:
               
chr22:12892169-12892480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
68, 185
               

               
Conread position:
               
23-447
               

               
Cow position:
               
chr22:24583880-24584290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
68, 170
               

               
Conread position:
               
23-448
               

               
Cow position:
               
chr22:25221711-25222149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 103
               

               
Conread position:
               
23-464
               

               
Cow position:
               
chr22:6215365-6215818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 183
               

               
Conread position:
               
23-469
               

               
Cow position:
               
chr22:32480275-32480734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
72, 319
               

               
Conread position:
               
24-201
               

               
Cow position:
               
chr22:30687210-30687032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
24-252
               

               
Cow position:
               
chr22:17129194-17128973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
24-322
               

               
Cow position:
               
chr22:19459853-19460165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
62, 185
               

               
Conread position:
               
25-469
               

               
Cow position:
               
chr22:10532683-10532227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 204
               

               
Conread position:
               
30-220
               

               
Cow position:
               
chr22:18847786-18847974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
68, 80
               

               
Conread position:
               
30-247
               

               
Cow position:
               
chr22:26804007-26803784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
48, 186
               

               
Conread position:
               
30-469
               

               
Cow position:
               
chr22:13669982-13670439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
61, 106
               

               
Conread position:
               
31-239
               

               
Cow position:
               
chr22:16724504-16724713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
62, 29
               

               
Conread position:
               
31-307
               

               
Cow position:
               
chr22:9597401-9597676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
66, 147
               

               
Conread position:
               
31-401
               

               
Cow position:
               
chr22:14378508-14378885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
64, 154
               

               
Conread position:
               
31-454
               

               
Cow position:
               
chr22:40120689-40121133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 179
               

               
Conread position:
               
35-213
               

               
Cow position:
               
chr22:6793700-6793880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
35-239
               

               
Cow position:
               
chr22:32514477-32514265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
9, 173
               

               
Conread position:
               
35-245
               

               
Cow position:
               
chr22:30642953-30643167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
52, 15
               

               
Conread position:
               
35-462
               

               
Cow position:
               
chr22:24066060-24066497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
63, 123
               

               
Conread position:
               
37-209
               

               
Cow position:
               
chr22:14509313-14509479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
38-213
               

               
Cow position:
               
chr22:8331178-8330992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
38-306
               

               
Cow position:
               
chr22:18933534-18933812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
57, 248
               

               
Conread position:
               
38-464
               

               
Cow position:
               
chr22:45513347-45513784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
59, 143
               

               
Conread position:
               
38-466
               

               
Cow position:
               
chr22:30484081-30483646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 47
               

               
Conread position:
               
41-371
               

               
Cow position:
               
chr22:15024935-15025280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
49, 183
               

               
Conread position:
               
47-191
               

               
Cow position:
               
chr22:48155589-48155442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
55-401
               

               
Cow position:
               
chr22:27047263-27047601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
220, 9
               

               
Conread position:
               
58-462
               

               
Cow position:
               
chr22:4535182-4535588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 14
               

               
Conread position:
               
63-268
               

               
Cow position:
               
chr22:45505857-45506062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
7, 118
               

               
Conread position:
               
73-299
               

               
Cow position:
               
chr22:27741023-27740804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
184, 29
               

               
Conread position:
               
78-273
               

               
Cow position:
               
chr22:10286100-10285907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
20, 57
               

               
Conread position:
               
78-464
               

               
Cow position:
               
chr22:27328765-27329147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 25
               

               
Conread position:
               
82-213
               

               
Cow position:
               
chr22:23400815-23400684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
82-462
               

               
Cow position:
               
chr22:13769604-13769221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
15, 122
               

               
Conread position:
               
82-462
               

               
Cow position:
               
chr22:32188730-32189101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 13
               

               
Conread position:
               
84-366
               

               
Cow position:
               
chr22:26969912-26969612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
67, 137
               

               
Conread position:
               
84-462
               

               
Cow position:
               
chr22:17814356-17813966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 91
               

               
Conread position:
               
84-469
               

               
Cow position:
               
chr22:14924610-14924993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 11
               

               
Conread position:
               
85-209
               

               
Cow position:
               
chr22:16797726-16797850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
85-275
               

               
Cow position:
               
chr22:2075889-2076072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
17, 21
               

               
Conread position:
               
85-542
               

               
Cow position:
               
chr22:34750794-34750330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 18
               

               
Conread position:
               
86-435
               

               
Cow position:
               
chr22:22223308-22222957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 109
               

               
Conread position:
               
87-284
               

               
Cow position:
               
chr22:10533714-10533521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
11, 87
               

               
Conread position:
               
87-317
               

               
Cow position:
               
chr22:23750776-23751002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
11, 87
               

               
Conread position:
               
87-469
               

               
Cow position:
               
chr22:2502947-2502569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 103
               

               
Conread position:
               
87-479
               

               
Cow position:
               
chr22:30049447-30049853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 8
               

               
Conread position:
               
88-461
               

               
Cow position:
               
chr22:37324661-37324286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 56
               

               
Conread position:
               
88-469
               

               
Cow position:
               
chr22:3842737-3842357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 84
               

               
Conread position:
               
90-213
               

               
Cow position:
               
chr22:10752425-10752548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
91-189
               

               
Cow position:
               
chr22:23397858-23397956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
91-194
               

               
Cow position:
               
chr22:16058089-16057990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
91-215
               

               
Cow position:
               
chr22:6326561-6326436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
91-239
               

               
Cow position:
               
chr22:28120839-28120694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
91-296
               

               
Cow position:
               
chr22:26123013-26122809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
149, 105
               

               
Conread position:
               
91-304
               

               
Cow position:
               
chr22:11986794-11986995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
148, 60
               

               
Conread position:
               
91-452
               

               
Cow position:
               
chr22:12967953-12968321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 108
               

               
Conread position:
               
91-456
               

               
Cow position:
               
chr22:17294820-17295184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 108
               

               
Conread position:
               
91-462
               

               
Cow position:
               
chr22:4017590-4017213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
7, 81
               

               
Conread position:
               
91-462
               

               
Cow position:
               
chr22:24610978-24611338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 50
               

               
Conread position:
               
91-469
               

               
Cow position:
               
chr22:8840722-8840318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 122
               

               
Conread position:
               
91-477
               

               
Cow position:
               
chr22:8138149-8138535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
147, 108
               

               
Conread position:
               
91-479
               

               
Cow position:
               
chr22:23176325-23176729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 108
               

               
Conread position:
               
91-489
               

               
Cow position:
               
chr22:26659158-26658767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 90
               

               
Conread position:
               
92-365
               

               
Cow position:
               
chr22:24628544-24628819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
176, 14
               

               
Conread position:
               
93-463
               

               
Cow position:
               
chr22:28146791-28146421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 158
               

               
Conread position:
               
93-469
               

               
Cow position:
               
chr22:16911682-16912062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
5, 41
               

               
Conread position:
               
93-481
               

               
Cow position:
               
chr22:46610668-46611061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 10
               

               
Conread position:
               
94-460
               

               
Cow position:
               
chr22:3950365-3949981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 71
               

               
Conread position:
               
96-194
               

               
Cow position:
               
chr22:27052622-27052720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
96-206
               

               
Cow position:
               
chr22:21215824-21215714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
96-448
               

               
Cow position:
               
chr22:7852075-7851711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 113
               

               
Conread position:
               
97-207
               

               
Cow position:
               
chr22:11468485-11468374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
97-207
               

               
Cow position:
               
chr22:12599481-12599371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
97-238
               

               
Cow position:
               
chr22:2644038-2643905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
97-244
               

               
Cow position:
               
chr22:23398294-23398436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
143, 113
               

               
Conread position:
               
97-245
               

               
Cow position:
               
chr22:24032105-24032248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
142, 102
               

               
Conread position:
               
97-297
               

               
Cow position:
               
chr22:23121892-23122098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
142, 99
               

               
Conread position:
               
97-299
               

               
Cow position:
               
chr22:13222227-13222021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
148, 78
               

               
Conread position:
               
97-314
               

               
Cow position:
               
chr22:13878287-13878084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
97-317
               

               
Cow position:
               
chr22:34618908-34618692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
142, 102
               

               
Conread position:
               
97-357
               

               
Cow position:
               
chr22:2912480-2912743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
176, 34
               

               
Conread position:
               
97-426
               

               
Cow position:
               
chr22:43119619-43119955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
125, 226
               

               
Conread position:
               
97-453
               

               
Cow position:
               
chr22:2627690-2627323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 88
               

               
Conread position:
               
97-468
               

               
Cow position:
               
chr22:26316566-26316211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
143, 120
               

               
Conread position:
               
97-469
               

               
Cow position:
               
chr22:877625-877254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
142, 100
               

               
Conread position:
               
97-469
               

               
Cow position:
               
chr22:23806431-23806816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
145, 118
               

               
Conread position:
               
97-469
               

               
Cow position:
               
chr22:23857156-23856779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 102
               

               
Conread position:
               
97-469
               

               
Cow position:
               
chr22:34712835-34712445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 27
               

               
Conread position:
               
97-469
               

               
Cow position:
               
chr22:44180703-44180324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 107
               

               
Conread position:
               
97-471
               

               
Cow position:
               
chr22:16044306-16044699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 99
               

               
Conread position:
               
97-475
               

               
Cow position:
               
chr22:15090852-15090466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
144, 102
               

               
Conread position:
               
97-475
               

               
Cow position:
               
chr22:34616416-34616035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
145, 101
               

               
Conread position:
               
97-481
               

               
Cow position:
               
chr22:28057940-28058321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 119
               

               
Conread position:
               
98-197
               

               
Cow position:
               
chr22:21369187-21369286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
98-209
               

               
Cow position:
               
chr22:3997862-3997751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
98-250
               

               
Cow position:
               
chr22:7832245-7832392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
141, 98
               

               
Conread position:
               
98-284
               

               
Cow position:
               
chr22:6936365-6936190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
98-396
               

               
Cow position:
               
chr22:21530250-21530547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
76, 115
               

               
Conread position:
               
98-402
               

               
Cow position:
               
chr22:27274591-27274895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
142, 112
               

               
Conread position:
               
98-458
               

               
Cow position:
               
chr22:34606699-34606335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
96, 32
               

               
Conread position:
               
98-460
               

               
Cow position:
               
chr22:24509555-24509920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
64, 8
               

               
Conread position:
               
98-461
               

               
Cow position:
               
chr22:28665392-28665007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 111
               

               
Conread position:
               
98-464
               

               
Cow position:
               
chr22:4292856-4292509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
117, 85
               

               
Conread position:
               
98-488
               

               
Cow position:
               
chr22:24175787-24176163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
142, 77
               

               
Conread position:
               
99-196
               

               
Cow position:
               
chr22:2516799-2516896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
99-248
               

               
Cow position:
               
chr22:20846964-20846820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
84, 113
               

               
Conread position:
               
100-403
               

               
Cow position:
               
chr22:11458922-11458621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
174, 23
               

               
Conread position:
               
101-313
               

               
Cow position:
               
chr22:28704290-28704084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
138, 98
               

               
Conread position:
               
102-296
               

               
Cow position:
               
chr22:23430528-23430710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
105-408
               

               
Cow position:
               
chr22:17125684-17125374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
133, 68
               

               
Conread position:
               
106-273
               

               
Cow position:
               
chr22:28290219-28290058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
106-466
               

               
Cow position:
               
chr22:14638376-14638731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
60, 96
               

               
Conread position:
               
109-464
               

               
Cow position:
               
chr22:34398358-34398719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
130, 96
               

               
Conread position:
               
113-543
               

               
Cow position:
               
chr22:19139372-19139792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
116-542
               

               
Cow position:
               
chr22:22997566-22997125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
103, 8
               

               
Conread position:
               
119-462
               

               
Cow position:
               
chr22:30955105-30954777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
183, 32
               

               
Conread position:
               
121-469
               

               
Cow position:
               
chr22:43291816-43292171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 49
               

               
Conread position:
               
123-459
               

               
Cow position:
               
chr22:7838674-7838346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
46, 41
               

               
Conread position:
               
124-312
               

               
Cow position:
               
chr22:24223152-24222973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
176, 18
               

               
Conread position:
               
174-543
               

               
Cow position:
               
chr22:44389861-44390227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
74, 31
               

               
Conread position:
               
207-462
               

               
Cow position:
               
chr22:18654037-18654314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 250
               

               
Conread position:
               
207-488
               

               
Cow position:
               
chr22:12777585-12777866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
27, 43
               

               
Conread position:
               
207-488
               

               
Cow position:
               
chr22:25342022-25341731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 16
               

               
Conread position:
               
219-530
               

               
Cow position:
               
chr22:35902702-35903019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
22, 114
               

               
Conread position:
               
297-469
               

               
Cow position:
               
chr22:16235751-16235919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
298-469
               

               
Cow position:
               
chr22:34665946-34665783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
303-468
               

               
Cow position:
               
chr22:28120688-28120523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.