Cow genome map

Conread name: rthg25_c11.y1

Conread position: 1-200
Cow position: chr3:59885725-59885526 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 23, 152

Conread position: 1-209
Cow position: chr3:42967200-42967401 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 1-299
Cow position: chr3:3889385-3889678 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 13

Conread position: 1-450
Cow position: chr3:51578133-51578591 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 21

Conread position: 1-469
Cow position: chr3:83491274-83490787 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 150

Conread position: 2-191
Cow position: chr3:70333036-70333226 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 11, 165

Conread position: 2-203
Cow position: chr3:59828193-59828410 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 2-210
Cow position: chr3:75966589-75966805 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 171
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 16, 184

Conread position: 2-266
Cow position: chr3:3036749-3037003 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 189
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 140, 62

Conread position: 2-284
Cow position: chr3:75777876-75778154 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 209
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 16, 102

Conread position: 2-300
Cow position: chr3:18059896-18059589 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 221
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 23, 5

Conread position: 2-462
Cow position: chr3:30180276-30179800 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 203

Conread position: 2-487
Cow position: chr3:9641746-9641258 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 22

Conread position: 3-197
Cow position: chr3:32127229-32127416 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 3-210
Cow position: chr3:27246775-27246983 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 10, 0

Conread position: 3-210
Cow position: chr3:84807134-84807352 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 28, 53

Conread position: 4-208
Cow position: chr3:4271558-4271350 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 48

Conread position: 4-395
Cow position: chr3:25477983-25477597 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 273
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 17, 125

Conread position: 5-194
Cow position: chr3:3818953-3818776 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 5-252
Cow position: chr3:81234578-81234329 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 188
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 17, 202

Conread position: 5-256
Cow position: chr3:56678156-56678414 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 37, 22

Conread position: 5-356
Cow position: chr3:55819936-55819566 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 263
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 82, 9

Conread position: 5-468
Cow position: chr3:64172610-64172157 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 7

Conread position: 6-376
Cow position: chr3:55318709-55319103 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 120

Conread position: 6-461
Cow position: chr3:4050370-4049932 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 86

Conread position: 6-485
Cow position: chr3:65413079-65413579 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 18

Conread position: 7-175
Cow position: chr3:68624406-68624228 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 80, 0

Conread position: 7-183
Cow position: chr3:22094426-22094596 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 17, 84

Conread position: 7-186
Cow position: chr3:77654109-77653928 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 15, 172

Conread position: 7-189
Cow position: chr3:76300961-76300767 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 7-193
Cow position: chr3:15859194-15859386 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 17, 122

Conread position: 7-193
Cow position: chr3:79207528-79207710 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 29, 86

Conread position: 7-193
Cow position: chr3:80958322-80958518 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 80, 164

Conread position: 7-196
Cow position: chr3:2016618-2016425 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 88, 23

Conread position: 7-201
Cow position: chr3:18699919-18700126 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 13, 0

Conread position: 7-202
Cow position: chr3:31115091-31115286 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 7-206
Cow position: chr3:14211798-14212004 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 7-207
Cow position: chr3:63860423-63860632 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 7-208
Cow position: chr3:32610432-32610242 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 56

Conread position: 7-209
Cow position: chr3:32377000-32376791 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 17, 186

Conread position: 7-210
Cow position: chr3:78071605-78071816 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 85, 0

Conread position: 7-212
Cow position: chr3:59317888-59317675 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 17, 130

Conread position: 7-213
Cow position: chr3:11229184-11229392 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 80, 43

Conread position: 7-213
Cow position: chr3:22924193-22924402 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 142
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 7-243
Cow position: chr3:10591328-10591567 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 159, 16

Conread position: 7-244
Cow position: chr3:40212847-40213086 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 184
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 17, 205

Conread position: 7-272
Cow position: chr3:36160012-36160276 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 17, 91

Conread position: 7-280
Cow position: chr3:69650711-69650974 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 59, 53

Conread position: 7-282
Cow position: chr3:27976336-27976616 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 208
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 67, 32

Conread position: 7-296
Cow position: chr3:65019665-65019974 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 227
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 17, 108

Conread position: 7-299
Cow position: chr3:13380092-13380398 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 205
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 91, 17

Conread position: 7-299
Cow position: chr3:21014766-21015072 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 222
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 18, 49

Conread position: 7-299
Cow position: chr3:48468364-48468071 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 215
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 17, 204

Conread position: 7-299
Cow position: chr3:51033561-51033259 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 212
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 14, 50

Conread position: 7-317
Cow position: chr3:48900143-48900466 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 225
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 80, 185

Conread position: 7-343
Cow position: chr3:48810451-48810804 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 259
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 64, 154

Conread position: 7-390
Cow position: chr3:36375350-36375758 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 280
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 18, 199

Conread position: 7-453
Cow position: chr3:54946308-54945852 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 38

Conread position: 7-456
Cow position: chr3:73764028-73764469 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 83

Conread position: 7-460
Cow position: chr3:49482526-49482984 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 47

Conread position: 7-462
Cow position: chr3:31225609-31225167 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 44

Conread position: 7-468
Cow position: chr3:75480184-75479724 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 305
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 83, 5

Conread position: 7-469
Cow position: chr3:48253067-48252608 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 227

Conread position: 7-469
Cow position: chr3:68587208-68586749 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 115

Conread position: 7-475
Cow position: chr3:29813413-29812950 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 169

Conread position: 8-437
Cow position: chr3:71238337-71237900 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 8-544
Cow position: chr3:23471276-23471837 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 201

Conread position: 9-178
Cow position: chr3:83325392-83325220 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 9-299
Cow position: chr3:70333784-70334075 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 207
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 86, 194

Conread position: 9-421
Cow position: chr3:39661268-39661691 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 290
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 15, 182

Conread position: 9-459
Cow position: chr3:59451783-59451316 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 322
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 39, 89

Conread position: 9-464
Cow position: chr3:54435154-54434690 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 136

Conread position: 10-193
Cow position: chr3:55730282-55730476 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 10-210
Cow position: chr3:76056104-76056309 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 88, 0

Conread position: 10-282
Cow position: chr3:23203045-23203327 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 77, 141

Conread position: 10-394
Cow position: chr3:20841694-20842074 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 195

Conread position: 10-402
Cow position: chr3:83215454-83215031 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 300
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 15, 221

Conread position: 10-419
Cow position: chr3:22232484-22232882 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 264
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 229, 41

Conread position: 10-462
Cow position: chr3:54340258-54340698 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 306
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 237, 14

Conread position: 10-468
Cow position: chr3:40100544-40100962 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 317
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 13, 80

Conread position: 11-178
Cow position: chr3:11608001-11607830 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 13, 100

Conread position: 11-185
Cow position: chr3:60186336-60186146 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 166

Conread position: 11-199
Cow position: chr3:79398329-79398129 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 11-209
Cow position: chr3:35624359-35624568 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 13, 120

Conread position: 11-235
Cow position: chr3:18831602-18831372 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 174
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 16, 210

Conread position: 11-385
Cow position: chr3:55712615-55712220 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 85

Conread position: 11-437
Cow position: chr3:3556732-3556287 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 305
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 13, 200

Conread position: 11-450
Cow position: chr3:13301666-13302126 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 69

Conread position: 11-462
Cow position: chr3:71231581-71231124 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 165

Conread position: 11-469
Cow position: chr3:48241790-48241332 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 39

Conread position: 12-209
Cow position: chr3:15973751-15973543 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 75, 18

Conread position: 12-273
Cow position: chr3:34871751-34871483 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 196
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 12, 140

Conread position: 12-445
Cow position: chr3:59474302-59473847 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 190

Conread position: 12-462
Cow position: chr3:14801927-14801469 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 313
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 12, 39

Conread position: 12-464
Cow position: chr3:65969357-65968871 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 200

Conread position: 13-197
Cow position: chr3:26783326-26783518 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 92, 147

Conread position: 13-202
Cow position: chr3:18001367-18001182 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 13-207
Cow position: chr3:43388944-43389149 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 82, 0

Conread position: 13-271
Cow position: chr3:64197008-64196744 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 181
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 13, 195

Conread position: 13-299
Cow position: chr3:58317762-58318065 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 211
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 215

Conread position: 13-369
Cow position: chr3:23105184-23105559 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 246
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 82, 319

Conread position: 13-469
Cow position: chr3:48363250-48362794 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 168

Conread position: 14-152
Cow position: chr3:27212498-27212355 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 14-178
Cow position: chr3:53249665-53249501 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 73, 142

Conread position: 14-193
Cow position: chr3:62186338-62186144 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 80, 0

Conread position: 14-194
Cow position: chr3:28323390-28323208 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 84, 0

Conread position: 14-195
Cow position: chr3:31349929-31350113 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 89, 17

Conread position: 14-198
Cow position: chr3:80910777-80910583 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 14-203
Cow position: chr3:8526199-8526381 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 52, 0

Conread position: 14-203
Cow position: chr3:54557846-54557657 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 84, 77

Conread position: 14-203
Cow position: chr3:59681727-59681921 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 154
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 81, 0

Conread position: 14-209
Cow position: chr3:44960125-44959919 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 14-209
Cow position: chr3:47198945-47199150 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 10, 37

Conread position: 14-213
Cow position: chr3:28896841-28897046 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 73, 126

Conread position: 14-213
Cow position: chr3:41550214-41550401 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 14-213
Cow position: chr3:77276285-77276485 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 83, 159

Conread position: 14-217
Cow position: chr3:22092305-22092118 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 14-230
Cow position: chr3:84137633-84137853 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 10, 193

Conread position: 14-244
Cow position: chr3:30357689-30357470 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 176
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 73, 105

Conread position: 14-254
Cow position: chr3:31361603-31361358 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 168
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 74, 196

Conread position: 14-262
Cow position: chr3:39247852-39248093 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 192
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 76, 36

Conread position: 14-299
Cow position: chr3:60389932-60389656 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 209
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 245, 57

Conread position: 14-299
Cow position: chr3:67519996-67520283 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 89

Conread position: 14-299
Cow position: chr3:76024683-76024408 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 206
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 59, 36

Conread position: 14-308
Cow position: chr3:58764906-58765196 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 208
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 215, 71

Conread position: 14-332
Cow position: chr3:3649059-3649364 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 233
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 81, 55

Conread position: 14-351
Cow position: chr3:76267794-76268158 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 199

Conread position: 14-354
Cow position: chr3:36418307-36418644 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 226
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 83, 167

Conread position: 14-458
Cow position: chr3:2392789-2393244 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 177

Conread position: 14-458
Cow position: chr3:5374489-5374057 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 39

Conread position: 14-460
Cow position: chr3:3985496-3985050 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 171

Conread position: 14-460
Cow position: chr3:65058879-65058422 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 193

Conread position: 14-461
Cow position: chr3:77365112-77365575 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 325
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 73, 31

Conread position: 14-462
Cow position: chr3:2025384-2024902 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 333
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 10, 193

Conread position: 14-462
Cow position: chr3:2518361-2518819 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 300
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 48, 191

Conread position: 14-464
Cow position: chr3:45882079-45881625 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 195

Conread position: 14-464
Cow position: chr3:59597353-59596920 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 306
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 83, 190

Conread position: 14-469
Cow position: chr3:5365845-5365397 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 74

Conread position: 14-469
Cow position: chr3:70896219-70895757 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 53

Conread position: 14-473
Cow position: chr3:54739720-54740165 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 36

Conread position: 14-475
Cow position: chr3:64280758-64281232 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 101

Conread position: 14-487
Cow position: chr3:59333939-59333469 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 344
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 22, 49

Conread position: 14-488
Cow position: chr3:68707842-68708310 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 89

Conread position: 14-542
Cow position: chr3:67744461-67744980 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 36

Conread position: 15-169
Cow position: chr3:24922922-24922764 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 92

Conread position: 15-181
Cow position: chr3:74050527-74050697 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 15-212
Cow position: chr3:41863801-41863599 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 73, 0

Conread position: 15-216
Cow position: chr3:29334232-29334444 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 63, 15

Conread position: 15-233
Cow position: chr3:31804591-31804807 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 82, 75

Conread position: 15-234
Cow position: chr3:28902583-28902806 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 78, 100

Conread position: 15-245
Cow position: chr3:71423390-71423605 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 177
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 224, 35

Conread position: 15-253
Cow position: chr3:57704511-57704266 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 76, 154

Conread position: 15-302
Cow position: chr3:5040124-5040417 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 204
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 78, 175

Conread position: 15-408
Cow position: chr3:68145676-68146064 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 275
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 80, 38

Conread position: 15-430
Cow position: chr3:18687080-18686666 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 185

Conread position: 15-432
Cow position: chr3:9074185-9074575 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 281
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 224, 69

Conread position: 15-453
Cow position: chr3:15051773-15052210 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 301
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 80, 160

Conread position: 15-456
Cow position: chr3:2506297-2506755 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 142

Conread position: 15-462
Cow position: chr3:59605021-59604589 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 167

Conread position: 15-463
Cow position: chr3:39873529-39873944 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 55

Conread position: 15-466
Cow position: chr3:27274706-27274254 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 316
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 80, 151

Conread position: 15-469
Cow position: chr3:19711158-19711604 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 24

Conread position: 15-469
Cow position: chr3:53150512-53150038 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 195

Conread position: 15-469
Cow position: chr3:78077369-78076900 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 320
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 74, 197

Conread position: 15-489
Cow position: chr3:22221505-22221042 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 168

Conread position: 16-158
Cow position: chr3:43527616-43527756 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 16-191
Cow position: chr3:12899767-12899945 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 10, 103

Conread position: 16-206
Cow position: chr3:23037330-23037527 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 71, 60

Conread position: 16-240
Cow position: chr3:82366307-82366081 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 76, 172

Conread position: 16-241
Cow position: chr3:46559538-46559769 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 67, 105

Conread position: 16-272
Cow position: chr3:47316199-47316461 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 179
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 179

Conread position: 16-273
Cow position: chr3:23804680-23804435 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 193
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 81, 34

Conread position: 16-299
Cow position: chr3:2648330-2648622 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 208
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 75, 209

Conread position: 16-299
Cow position: chr3:73299244-73298975 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 10, 35

Conread position: 16-360
Cow position: chr3:54506884-54506525 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 247
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 73, 192

Conread position: 16-441
Cow position: chr3:51233926-51234357 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 172

Conread position: 16-462
Cow position: chr3:24872869-24872461 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 302
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 225, 10

Conread position: 16-462
Cow position: chr3:26904277-26903833 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 72

Conread position: 16-543
Cow position: chr3:73467804-73467259 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 34

Conread position: 17-197
Cow position: chr3:23640516-23640332 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 78, 0

Conread position: 17-232
Cow position: chr3:10733055-10732850 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 17-298
Cow position: chr3:46005838-46006122 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 74, 147

Conread position: 17-299
Cow position: chr3:14194013-14194291 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 109, 22

Conread position: 17-299
Cow position: chr3:15443549-15443841 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 187

Conread position: 17-299
Cow position: chr3:20993972-20993700 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 209
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 223, 46

Conread position: 17-299
Cow position: chr3:45667166-45667456 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 209
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 67, 107

Conread position: 17-307
Cow position: chr3:1517335-1517630 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 219
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 15, 190

Conread position: 17-352
Cow position: chr3:19793074-19792716 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 33

Conread position: 17-437
Cow position: chr3:52651903-52652331 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 191

Conread position: 17-461
Cow position: chr3:34271078-34270650 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 71

Conread position: 17-462
Cow position: chr3:53790365-53790826 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 325
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 80, 49

Conread position: 17-467
Cow position: chr3:8393516-8393059 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 25

Conread position: 17-544
Cow position: chr3:29359987-29360492 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 73

Conread position: 18-180
Cow position: chr3:64909919-64910090 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 18-193
Cow position: chr3:79893320-79893505 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 18-195
Cow position: chr3:37641502-37641316 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 76, 96

Conread position: 18-198
Cow position: chr3:23131992-23132181 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 18-202
Cow position: chr3:44960842-44961021 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 18-207
Cow position: chr3:986191-985993 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 71, 114

Conread position: 18-207
Cow position: chr3:58101851-58101658 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 75, 129

Conread position: 18-207
Cow position: chr3:70402814-70402623 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 150
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 69, 138

Conread position: 18-209
Cow position: chr3:4120195-4120389 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 74, 0

Conread position: 18-213
Cow position: chr3:79272400-79272600 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 18-214
Cow position: chr3:53604568-53604774 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 18-251
Cow position: chr3:16107198-16107418 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 6, 33

Conread position: 18-256
Cow position: chr3:2638109-2637861 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 56, 196

Conread position: 18-265
Cow position: chr3:35075048-35074809 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 188
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 81, 193

Conread position: 18-273
Cow position: chr3:72342424-72342163 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 190

Conread position: 18-297
Cow position: chr3:77582282-77582000 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 214
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 73, 167

Conread position: 18-299
Cow position: chr3:19586040-19585750 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 197
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 156

Conread position: 18-299
Cow position: chr3:21866862-21867149 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 201
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 57, 189

Conread position: 18-299
Cow position: chr3:22888838-22889127 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 198
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 69, 56

Conread position: 18-299
Cow position: chr3:24468208-24468490 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 202
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 77, 35

Conread position: 18-299
Cow position: chr3:58527553-58527286 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 206
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 79, 150

Conread position: 18-337
Cow position: chr3:15153865-15153531 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 249
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 6, 187

Conread position: 18-413
Cow position: chr3:17134507-17134106 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 277

Conread position: 18-420
Cow position: chr3:78092335-78092746 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 285
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 65, 121

Conread position: 18-461
Cow position: chr3:18459361-18459801 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 32

Conread position: 18-462
Cow position: chr3:7763834-7763381 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 153

Conread position: 18-464
Cow position: chr3:14553048-14552594 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 186

Conread position: 18-466
Cow position: chr3:55189574-55190036 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 303
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 76, 225

Conread position: 18-468
Cow position: chr3:18393224-18393668 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 87

Conread position: 18-468
Cow position: chr3:33252716-33253166 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 191

Conread position: 18-469
Cow position: chr3:15228665-15229108 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 48

Conread position: 18-469
Cow position: chr3:42480771-42480335 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 308
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 197, 62

Conread position: 18-499
Cow position: chr3:39969687-39970190 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 189

Conread position: 19-207
Cow position: chr3:61023846-61024044 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 76, 8

Conread position: 19-207
Cow position: chr3:83672030-83671834 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 68, 109

Conread position: 19-212
Cow position: chr3:59947843-59947639 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 19-239
Cow position: chr3:11281944-11281719 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 68, 202

Conread position: 19-257
Cow position: chr3:56948921-56949152 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 188
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 72, 31

Conread position: 19-297
Cow position: chr3:55177576-55177860 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 197
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 76, 180

Conread position: 19-357
Cow position: chr3:53875587-53875940 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 229
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 59, 308

Conread position: 19-409
Cow position: chr3:81087461-81087839 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 272
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 67, 166

Conread position: 19-445
Cow position: chr3:73395290-73394851 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 56

Conread position: 19-458
Cow position: chr3:32585328-32584880 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 299
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 208

Conread position: 19-458
Cow position: chr3:68303493-68303050 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 181

Conread position: 19-459
Cow position: chr3:28908041-28908474 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 64

Conread position: 19-464
Cow position: chr3:23408189-23408626 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 302
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 68, 34

Conread position: 19-464
Cow position: chr3:37041591-37041145 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 196

Conread position: 19-483
Cow position: chr3:17936672-17937141 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 75

Conread position: 19-540
Cow position: chr3:66884855-66885397 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 187

Conread position: 19-543
Cow position: chr3:14601537-14602075 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 41

Conread position: 20-194
Cow position: chr3:23753658-23753482 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 74, 142

Conread position: 20-209
Cow position: chr3:39996720-39996914 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 75, 10

Conread position: 20-216
Cow position: chr3:15160691-15160490 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 20-343
Cow position: chr3:35153780-35153454 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 242
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 221, 73

Conread position: 20-396
Cow position: chr3:4319893-4319494 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 195

Conread position: 20-462
Cow position: chr3:53271007-53270544 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 190

Conread position: 20-468
Cow position: chr3:20802466-20802917 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 83

Conread position: 22-210
Cow position: chr3:80023143-80023333 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 38, 152

Conread position: 22-273
Cow position: chr3:17058375-17058622 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 182
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 65, 184

Conread position: 22-273
Cow position: chr3:75238633-75238376 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 10, 189

Conread position: 22-282
Cow position: chr3:14547171-14546907 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 63, 112

Conread position: 22-299
Cow position: chr3:74846553-74846821 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 211
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 225, 47

Conread position: 22-462
Cow position: chr3:72592-72133 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 72

Conread position: 22-477
Cow position: chr3:60597709-60597256 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 157

Conread position: 23-464
Cow position: chr3:65237194-65236741 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 254

Conread position: 23-469
Cow position: chr3:10958073-10958517 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 309
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 69, 27

Conread position: 23-469
Cow position: chr3:30463005-30463455 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 43

Conread position: 24-201
Cow position: chr3:27286685-27286503 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 71, 0

Conread position: 24-202
Cow position: chr3:49363277-49363093 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 24-207
Cow position: chr3:59272001-59271812 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 136

Conread position: 24-456
Cow position: chr3:74500427-74499948 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 24-460
Cow position: chr3:55124115-55124558 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 25

Conread position: 25-213
Cow position: chr3:20021437-20021242 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 25-355
Cow position: chr3:76922504-76922842 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 229
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 66

Conread position: 27-173
Cow position: chr3:53552817-53552967 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 27-273
Cow position: chr3:84250382-84250626 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 190
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 60, 149

Conread position: 27-276
Cow position: chr3:48477865-48478117 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 126

Conread position: 28-261
Cow position: chr3:2484168-2483932 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 34, 175

Conread position: 30-193
Cow position: chr3:83934888-83934718 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 30-203
Cow position: chr3:62370221-62370038 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 65, 143

Conread position: 30-462
Cow position: chr3:59000599-59001027 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 134

Conread position: 31-276
Cow position: chr3:19793427-19793674 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 60, 125

Conread position: 31-460
Cow position: chr3:53046495-53046937 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 158

Conread position: 32-469
Cow position: chr3:7566259-7566708 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 176

Conread position: 34-461
Cow position: chr3:55010011-55010436 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 298
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 53, 167

Conread position: 35-203
Cow position: chr3:70756480-70756659 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 35-246
Cow position: chr3:39988093-39988289 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 38-194
Cow position: chr3:83199669-83199503 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 38-209
Cow position: chr3:84174460-84174278 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 38-305
Cow position: chr3:11640892-11640614 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 200
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 53, 194

Conread position: 38-467
Cow position: chr3:70334536-70334990 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 324
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 53, 172

Conread position: 40-437
Cow position: chr3:52608335-52607926 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 281
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 48, 166

Conread position: 54-203
Cow position: chr3:81065416-81065267 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 46, 109

Conread position: 57-306
Cow position: chr3:79645301-79645555 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 42, 7

Conread position: 57-456
Cow position: chr3:6873126-6873521 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 274
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 143, 33

Conread position: 57-461
Cow position: chr3:68582871-68583283 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 263
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 115, 73

Conread position: 58-376
Cow position: chr3:54100598-54100918 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 249
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 14, 23

Conread position: 73-210
Cow position: chr3:4167160-4167299 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 78-245
Cow position: chr3:57877675-57877513 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 133
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 21, 127

Conread position: 78-462
Cow position: chr3:61279015-61278624 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 284
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 195, 17

Conread position: 80-428
Cow position: chr3:58767368-58767031 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 249
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 165, 22

Conread position: 80-462
Cow position: chr3:42423221-42423613 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 287
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 18, 86

Conread position: 80-468
Cow position: chr3:82461290-82460895 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 290
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 17, 134

Conread position: 82-462
Cow position: chr3:48296801-48296429 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 256
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 133, 13

Conread position: 84-213
Cow position: chr3:11705354-11705224 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 84-253
Cow position: chr3:11292146-11292312 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 140
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 156, 115

Conread position: 85-498
Cow position: chr3:63179954-63179549 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 10

Conread position: 86-213
Cow position: chr3:8814012-8814140 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 109
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 12, 0

Conread position: 87-191
Cow position: chr3:4086766-4086869 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 87-197
Cow position: chr3:6853437-6853545 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 11, 76

Conread position: 87-303
Cow position: chr3:33693917-33693708 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 207, 8

Conread position: 87-361
Cow position: chr3:49790712-49790993 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 194
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 11, 267

Conread position: 87-410
Cow position: chr3:27940043-27940358 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 90

Conread position: 87-439
Cow position: chr3:13507566-13507204 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 248
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 148, 8

Conread position: 87-461
Cow position: chr3:81470996-81471381 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 113

Conread position: 87-462
Cow position: chr3:1830474-1830845 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 274
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 10, 86

Conread position: 87-468
Cow position: chr3:52863083-52863471 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 127

Conread position: 87-468
Cow position: chr3:61323431-61323064 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 267
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 11, 132

Conread position: 90-469
Cow position: chr3:5100677-5101049 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 14

Conread position: 90-543
Cow position: chr3:52419033-52418610 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 310
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 20, 6

Conread position: 91-195
Cow position: chr3:61133734-61133629 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 91-257
Cow position: chr3:56704225-56704387 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 135
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 7, 109

Conread position: 91-273
Cow position: chr3:26230205-26230015 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 91-296
Cow position: chr3:55984194-55983986 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 163
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 7, 69

Conread position: 91-298
Cow position: chr3:35621396-35621192 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 149, 102

Conread position: 91-340
Cow position: chr3:59883974-59884237 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 196
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 147, 108

Conread position: 91-405
Cow position: chr3:74134800-74134480 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 236
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 7, 125

Conread position: 91-459
Cow position: chr3:57624560-57624184 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 109

Conread position: 91-462
Cow position: chr3:12711819-12712205 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 107

Conread position: 91-468
Cow position: chr3:17934843-17935211 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 108

Conread position: 91-469
Cow position: chr3:83474841-83474460 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 262
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 7, 106

Conread position: 91-487
Cow position: chr3:58540426-58540838 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 71

Conread position: 91-540
Cow position: chr3:17895943-17895489 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 47

Conread position: 92-265
Cow position: chr3:61467096-61467266 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 153, 107

Conread position: 93-208
Cow position: chr3:28937513-28937627 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 93-273
Cow position: chr3:83928338-83928166 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 93-418
Cow position: chr3:67930094-67930416 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 240
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 178, 55

Conread position: 93-469
Cow position: chr3:28898131-28898511 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 10

Conread position: 94-406
Cow position: chr3:26960496-26960821 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 233
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 147, 121

Conread position: 94-453
Cow position: chr3:75045784-75046143 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 245
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 83

Conread position: 95-198
Cow position: chr3:65022385-65022282 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 95-299
Cow position: chr3:10104131-10103936 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 179, 74

Conread position: 95-460
Cow position: chr3:38691315-38691685 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 115

Conread position: 95-469
Cow position: chr3:37599337-37599705 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 104

Conread position: 95-469
Cow position: chr3:55970597-55970218 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 23

Conread position: 96-406
Cow position: chr3:53240346-53240047 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 216
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 37, 64

Conread position: 96-469
Cow position: chr3:55085080-55085473 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 9

Conread position: 96-544
Cow position: chr3:22716207-22716632 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 298
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 43, 120

Conread position: 97-210
Cow position: chr3:40199206-40199319 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 97-261
Cow position: chr3:67959833-67959985 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 97-263
Cow position: chr3:28735424-28735585 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 97-264
Cow position: chr3:64373067-64373225 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 99, 0

Conread position: 97-273
Cow position: chr3:74900554-74900720 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 39, 0

Conread position: 97-299
Cow position: chr3:43727160-43726965 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 19, 39

Conread position: 97-299
Cow position: chr3:72503807-72504010 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 142, 102

Conread position: 97-305
Cow position: chr3:20515729-20515931 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 141, 118

Conread position: 97-343
Cow position: chr3:30222280-30222018 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 143, 92

Conread position: 97-365
Cow position: chr3:57760587-57760309 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 212
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 174, 102

Conread position: 97-409
Cow position: chr3:59621559-59621865 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 227
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 174, 102

Conread position: 97-445
Cow position: chr3:72391171-72390816 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 264
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 142, 100

Conread position: 97-462
Cow position: chr3:66900644-66901024 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 102

Conread position: 97-462
Cow position: chr3:73443007-73443369 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 257
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 150, 44

Conread position: 97-483
Cow position: chr3:80581744-80581369 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 79

Conread position: 98-198
Cow position: chr3:59616977-59617077 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 98-451
Cow position: chr3:16254753-16255072 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 255
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 336, 77

Conread position: 98-462
Cow position: chr3:49650476-49650098 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 117

Conread position: 98-468
Cow position: chr3:49383037-49382664 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 131

Conread position: 99-193
Cow position: chr3:39157561-39157655 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 99-292
Cow position: chr3:58940212-58940025 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 174, 103

Conread position: 100-357
Cow position: chr3:34669647-34669909 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 111

Conread position: 100-445
Cow position: chr3:8733273-8733599 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 243
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 200, 71

Conread position: 100-462
Cow position: chr3:38347276-38346919 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 75

Conread position: 101-475
Cow position: chr3:64010730-64011111 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 22

Conread position: 102-248
Cow position: chr3:11606404-11606256 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 104, 82

Conread position: 103-362
Cow position: chr3:74502242-74502508 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 200
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 138, 101

Conread position: 105-219
Cow position: chr3:15683071-15683187 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 105-299
Cow position: chr3:62046745-62046551 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 136, 92

Conread position: 105-488
Cow position: chr3:5097288-5096894 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 93

Conread position: 106-300
Cow position: chr3:46541749-46541940 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 133, 93

Conread position: 106-462
Cow position: chr3:79292908-79292552 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 66

Conread position: 107-469
Cow position: chr3:80468599-80468938 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 257
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 288, 41

Conread position: 107-488
Cow position: chr3:56298-56678 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 69

Conread position: 108-273
Cow position: chr3:81277390-81277552 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 136
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 130, 104

Conread position: 109-469
Cow position: chr3:49218226-49218596 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 267
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 71, 146

Conread position: 113-395
Cow position: chr3:78896720-78896433 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 212
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 161, 96

Conread position: 116-393
Cow position: chr3:10896892-10896615 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 199
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 181, 83

Conread position: 116-426
Cow position: chr3:23444818-23445136 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 225
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 106, 267

Conread position: 124-544
Cow position: chr3:73759455-73759870 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 303
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 141, 49

Conread position: 127-299
Cow position: chr3:81359048-81359216 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 141, 85

Conread position: 127-445
Cow position: chr3:72019175-72018854 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 244
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 120, 49

Conread position: 128-499
Cow position: chr3:74878531-74878924 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 71

Conread position: 142-461
Cow position: chr3:83921228-83920917 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 241
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 133, 31

Conread position: 142-462
Cow position: chr3:36656759-36657052 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 230
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 67, 0

Conread position: 143-462
Cow position: chr3:19708065-19708381 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 238
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 97, 34

Conread position: 156-369
Cow position: chr3:70632051-70631825 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 42, 54

Conread position: 184-477
Cow position: chr3:27544331-27544625 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 211
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 55, 12

Conread position: 185-432
Cow position: chr3:41328451-41328203 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 172
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 15, 55

Conread position: 195-497
Cow position: chr3:78894329-78894632 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 213
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 79, 12

Conread position: 205-459
Cow position: chr3:49731652-49731916 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 188
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 34, 102

Conread position: 206-462
Cow position: chr3:17952644-17952374 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 35, 158

Conread position: 227-487
Cow position: chr3:82360008-82359747 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 133

Conread position: 267-463
Cow position: chr3:48811072-48811268 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 47, 67

Conread position: 288-542
Cow position: chr3:43007509-43007753 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 183
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 132, 30

Conread position: 298-466
Cow position: chr3:6078453-6078621 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 302-542
Cow position: chr3:32870020-32869794 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 17, 0

Show alignments to all cow chromosomes.