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Cow genome map

           
Conread name:
           
rthg25_c11.y1
        

               
Conread position:
               
1-361
               

               
Cow position:
               
chr8:26009112-26008729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
23, 9
               

               
Conread position:
               
1-462
               

               
Cow position:
               
chr8:6816447-6816920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 23
               

               
Conread position:
               
1-462
               

               
Cow position:
               
chr8:45879256-45878798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
1-462
               

               
Cow position:
               
chr8:45925838-45925380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
2-193
               

               
Cow position:
               
chr8:10832203-10832405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
2-197
               

               
Cow position:
               
chr8:49543109-49542906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
30, 59
               

               
Conread position:
               
2-273
               

               
Cow position:
               
chr8:55096100-55095832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
24, 163
               

               
Conread position:
               
2-450
               

               
Cow position:
               
chr8:54032103-54031642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
11, 53
               

               
Conread position:
               
2-461
               

               
Cow position:
               
chr8:58183079-58183556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 22
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr8:28378537-28378875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
16, 223
               

               
Conread position:
               
3-468
               

               
Cow position:
               
chr8:45664964-45664520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 49
               

               
Conread position:
               
3-479
               

               
Cow position:
               
chr8:948755-948282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 78
               

               
Conread position:
               
4-202
               

               
Cow position:
               
chr8:47410310-47410101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
4-406
               

               
Cow position:
               
chr8:11277880-11278309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 46
               

               
Conread position:
               
5-256
               

               
Cow position:
               
chr8:53927792-53928046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
15, 49
               

               
Conread position:
               
5-284
               

               
Cow position:
               
chr8:18729008-18728727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
22, 157
               

               
Conread position:
               
5-331
               

               
Cow position:
               
chr8:38852319-38851977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
15, 72
               

               
Conread position:
               
5-362
               

               
Cow position:
               
chr8:15686196-15686540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
142, 64
               

               
Conread position:
               
5-459
               

               
Cow position:
               
chr8:29958622-29958182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 29
               

               
Conread position:
               
5-462
               

               
Cow position:
               
chr8:25628551-25628099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
186, 42
               

               
Conread position:
               
5-462
               

               
Cow position:
               
chr8:35972071-35971597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 5
               

               
Conread position:
               
5-462
               

               
Cow position:
               
chr8:36375298-36375760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 196
               

               
Conread position:
               
6-194
               

               
Cow position:
               
chr8:54062120-54061925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
7-148
               

               
Cow position:
               
chr8:46684645-46684503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
88, 19
               

               
Conread position:
               
7-152
               

               
Cow position:
               
chr8:9646755-9646611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 64
               

               
Conread position:
               
7-194
               

               
Cow position:
               
chr8:47679727-47679539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
88, 153
               

               
Conread position:
               
7-198
               

               
Cow position:
               
chr8:54306575-54306379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
84, 174
               

               
Conread position:
               
7-203
               

               
Cow position:
               
chr8:39352654-39352857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
17, 159
               

               
Conread position:
               
7-207
               

               
Cow position:
               
chr8:11003574-11003786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
7-207
               

               
Cow position:
               
chr8:31767815-31768021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 164
               

               
Conread position:
               
7-207
               

               
Cow position:
               
chr8:35816895-35817105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
80, 109
               

               
Conread position:
               
7-211
               

               
Cow position:
               
chr8:28506733-28506933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 92
               

               
Conread position:
               
7-213
               

               
Cow position:
               
chr8:38811524-38811311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
19, 47
               

               
Conread position:
               
7-249
               

               
Cow position:
               
chr8:1526518-1526759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 138
               

               
Conread position:
               
7-257
               

               
Cow position:
               
chr8:55348540-55348305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
93, 7
               

               
Conread position:
               
7-268
               

               
Cow position:
               
chr8:24870584-24870851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
88, 202
               

               
Conread position:
               
7-272
               

               
Cow position:
               
chr8:21600675-21600401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
80, 207
               

               
Conread position:
               
7-273
               

               
Cow position:
               
chr8:61845327-61845604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
77, 193
               

               
Conread position:
               
7-299
               

               
Cow position:
               
chr8:37347227-37347535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
78, 46
               

               
Conread position:
               
7-333
               

               
Cow position:
               
chr8:12778676-12779009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
80, 46
               

               
Conread position:
               
7-365
               

               
Cow position:
               
chr8:43112629-43112991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 200
               

               
Conread position:
               
7-441
               

               
Cow position:
               
chr8:20926403-20926864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 392
               

               
Conread position:
               
7-462
               

               
Cow position:
               
chr8:1304129-1303658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
24, 173
               

               
Conread position:
               
7-462
               

               
Cow position:
               
chr8:23161153-23160705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
268, 77
               

               
Conread position:
               
7-465
               

               
Cow position:
               
chr8:642368-642808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 38
               

               
Conread position:
               
7-469
               

               
Cow position:
               
chr8:1188135-1187681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 138
               

               
Conread position:
               
7-469
               

               
Cow position:
               
chr8:20783039-20783536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
7-469
               

               
Cow position:
               
chr8:35827580-35828060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 47
               

               
Conread position:
               
8-187
               

               
Cow position:
               
chr8:5476297-5476474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 47
               

               
Conread position:
               
8-203
               

               
Cow position:
               
chr8:10801670-10801862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
8-273
               

               
Cow position:
               
chr8:61442998-61443263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
60, 92
               

               
Conread position:
               
8-284
               

               
Cow position:
               
chr8:37709355-37709092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
231, 42
               

               
Conread position:
               
8-437
               

               
Cow position:
               
chr8:53251475-53251911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 206
               

               
Conread position:
               
8-462
               

               
Cow position:
               
chr8:37298699-37298231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 116
               

               
Conread position:
               
8-463
               

               
Cow position:
               
chr8:8323645-8324110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 203
               

               
Conread position:
               
9-203
               

               
Cow position:
               
chr8:39556351-39556143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
81, 124
               

               
Conread position:
               
9-254
               

               
Cow position:
               
chr8:44569012-44568773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
13, 82
               

               
Conread position:
               
9-401
               

               
Cow position:
               
chr8:61128481-61128893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
86, 194
               

               
Conread position:
               
9-465
               

               
Cow position:
               
chr8:53230231-53229780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
88, 27
               

               
Conread position:
               
10-158
               

               
Cow position:
               
chr8:16053909-16053756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
10-199
               

               
Cow position:
               
chr8:36034746-36034945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
76, 197
               

               
Conread position:
               
10-242
               

               
Cow position:
               
chr8:34035892-34035656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 139
               

               
Conread position:
               
10-244
               

               
Cow position:
               
chr8:13922861-13922611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
10-251
               

               
Cow position:
               
chr8:32192898-32192665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
7, 82
               

               
Conread position:
               
10-271
               

               
Cow position:
               
chr8:37559344-37559085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
10, 113
               

               
Conread position:
               
10-273
               

               
Cow position:
               
chr8:19860455-19860706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
17, 96
               

               
Conread position:
               
10-317
               

               
Cow position:
               
chr8:43163488-43163796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
43, 34
               

               
Conread position:
               
10-460
               

               
Cow position:
               
chr8:43190821-43191271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
52, 126
               

               
Conread position:
               
11-167
               

               
Cow position:
               
chr8:33664117-33663957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
11-168
               

               
Cow position:
               
chr8:48693730-48693578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
11-188
               

               
Cow position:
               
chr8:39968062-39968248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 175
               

               
Conread position:
               
11-203
               

               
Cow position:
               
chr8:36860684-36860493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
77, 116
               

               
Conread position:
               
11-209
               

               
Cow position:
               
chr8:24419068-24419265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
11-212
               

               
Cow position:
               
chr8:34556386-34556176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 196
               

               
Conread position:
               
11-217
               

               
Cow position:
               
chr8:38993949-38993736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
13, 142
               

               
Conread position:
               
11-221
               

               
Cow position:
               
chr8:24406423-24406641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
13, 127
               

               
Conread position:
               
11-245
               

               
Cow position:
               
chr8:20327633-20327868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
20, 141
               

               
Conread position:
               
11-256
               

               
Cow position:
               
chr8:46964957-46964706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
13, 200
               

               
Conread position:
               
11-297
               

               
Cow position:
               
chr8:55974597-55974891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
61, 39
               

               
Conread position:
               
11-432
               

               
Cow position:
               
chr8:42145547-42145992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
13, 192
               

               
Conread position:
               
11-461
               

               
Cow position:
               
chr8:6232680-6233145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 20
               

               
Conread position:
               
11-469
               

               
Cow position:
               
chr8:21826522-21827003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 146
               

               
Conread position:
               
12-203
               

               
Cow position:
               
chr8:42378679-42378879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
12-317
               

               
Cow position:
               
chr8:21911861-21911548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 200
               

               
Conread position:
               
12-416
               

               
Cow position:
               
chr8:18870103-18869683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 185
               

               
Conread position:
               
12-468
               

               
Cow position:
               
chr8:29026441-29026870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 35
               

               
Conread position:
               
13-258
               

               
Cow position:
               
chr8:20582468-20582720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
11, 198
               

               
Conread position:
               
13-294
               

               
Cow position:
               
chr8:42846514-42846773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
252, 56
               

               
Conread position:
               
14-200
               

               
Cow position:
               
chr8:20897564-20897366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
14-202
               

               
Cow position:
               
chr8:3057059-3056859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
14-202
               

               
Cow position:
               
chr8:26315289-26315473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
14-202
               

               
Cow position:
               
chr8:29173422-29173228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
78, 32
               

               
Conread position:
               
14-207
               

               
Cow position:
               
chr8:53964254-53964443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
58, 28
               

               
Conread position:
               
14-209
               

               
Cow position:
               
chr8:8112955-8112749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
10, 26
               

               
Conread position:
               
14-210
               

               
Cow position:
               
chr8:48524753-48524943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
14-235
               

               
Cow position:
               
chr8:16500751-16500973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
81, 13
               

               
Conread position:
               
14-247
               

               
Cow position:
               
chr8:51511642-51511871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
81, 36
               

               
Conread position:
               
14-299
               

               
Cow position:
               
chr8:4992765-4992482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
60, 67
               

               
Conread position:
               
14-299
               

               
Cow position:
               
chr8:9402143-9401846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 192
               

               
Conread position:
               
14-300
               

               
Cow position:
               
chr8:53552884-53552600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
78, 20
               

               
Conread position:
               
14-306
               

               
Cow position:
               
chr8:5877857-5877559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 96
               

               
Conread position:
               
14-333
               

               
Cow position:
               
chr8:13454405-13454744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 42
               

               
Conread position:
               
14-402
               

               
Cow position:
               
chr8:50314965-50315354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
43, 127
               

               
Conread position:
               
14-425
               

               
Cow position:
               
chr8:24328632-24329058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 39
               

               
Conread position:
               
14-445
               

               
Cow position:
               
chr8:31645825-31646238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
258, 64
               

               
Conread position:
               
14-461
               

               
Cow position:
               
chr8:17199214-17199682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 117
               

               
Conread position:
               
14-464
               

               
Cow position:
               
chr8:61157016-61157472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 299
               

               
Conread position:
               
14-466
               

               
Cow position:
               
chr8:32854620-32855056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
283, 76
               

               
Conread position:
               
14-469
               

               
Cow position:
               
chr8:21220371-21219895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 196
               

               
Conread position:
               
14-469
               

               
Cow position:
               
chr8:26626087-26625619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 213
               

               
Conread position:
               
14-538
               

               
Cow position:
               
chr8:44437967-44437444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 70
               

               
Conread position:
               
14-542
               

               
Cow position:
               
chr8:36857944-36858429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
82, 22
               

               
Conread position:
               
15-156
               

               
Cow position:
               
chr8:32243810-32243661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
72, 27
               

               
Conread position:
               
15-191
               

               
Cow position:
               
chr8:60339714-60339889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
15-196
               

               
Cow position:
               
chr8:60668306-60668486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
105, 75
               

               
Conread position:
               
15-198
               

               
Cow position:
               
chr8:20910862-20911054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
15-203
               

               
Cow position:
               
chr8:30935127-30934933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 138
               

               
Conread position:
               
15-218
               

               
Cow position:
               
chr8:55064149-55063937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
73, 35
               

               
Conread position:
               
15-247
               

               
Cow position:
               
chr8:48086410-48086626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
223, 38
               

               
Conread position:
               
15-249
               

               
Cow position:
               
chr8:29965060-29964834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
224, 61
               

               
Conread position:
               
15-273
               

               
Cow position:
               
chr8:25133768-25133527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
224, 49
               

               
Conread position:
               
15-300
               

               
Cow position:
               
chr8:41721977-41722260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
101, 78
               

               
Conread position:
               
15-301
               

               
Cow position:
               
chr8:46082379-46082088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 163
               

               
Conread position:
               
15-313
               

               
Cow position:
               
chr8:19698854-19698560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
35, 50
               

               
Conread position:
               
15-321
               

               
Cow position:
               
chr8:55900812-55901112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
79, 11
               

               
Conread position:
               
15-359
               

               
Cow position:
               
chr8:55885186-55884823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
80, 350
               

               
Conread position:
               
15-461
               

               
Cow position:
               
chr8:55716966-55716508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 168
               

               
Conread position:
               
16-191
               

               
Cow position:
               
chr8:31902476-31902657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
16-201
               

               
Cow position:
               
chr8:56249973-56249782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
71, 95
               

               
Conread position:
               
16-213
               

               
Cow position:
               
chr8:29004060-29004252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
16-213
               

               
Cow position:
               
chr8:55089644-55089841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
79, 34
               

               
Conread position:
               
16-246
               

               
Cow position:
               
chr8:6535893-6536133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
49, 129
               

               
Conread position:
               
16-288
               

               
Cow position:
               
chr8:46743102-46743379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
71, 169
               

               
Conread position:
               
16-294
               

               
Cow position:
               
chr8:572949-573227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
79, 173
               

               
Conread position:
               
16-298
               

               
Cow position:
               
chr8:31265698-31265978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
79, 167
               

               
Conread position:
               
16-299
               

               
Cow position:
               
chr8:54177500-54177790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
72, 45
               

               
Conread position:
               
16-300
               

               
Cow position:
               
chr8:4525289-4525006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 203
               

               
Conread position:
               
16-366
               

               
Cow position:
               
chr8:19011587-19011951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
48, 33
               

               
Conread position:
               
16-402
               

               
Cow position:
               
chr8:54211064-54210697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
16, 71
               

               
Conread position:
               
16-459
               

               
Cow position:
               
chr8:60455390-60454950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 86
               

               
Conread position:
               
16-464
               

               
Cow position:
               
chr8:43027461-43027905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 69
               

               
Conread position:
               
16-464
               

               
Cow position:
               
chr8:57219005-57218562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
223, 79
               

               
Conread position:
               
16-466
               

               
Cow position:
               
chr8:3445884-3446331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 211
               

               
Conread position:
               
16-527
               

               
Cow position:
               
chr8:47135810-47136319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 145
               

               
Conread position:
               
17-191
               

               
Cow position:
               
chr8:45149591-45149761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
17-211
               

               
Cow position:
               
chr8:50282092-50281887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
15, 180
               

               
Conread position:
               
17-238
               

               
Cow position:
               
chr8:35497474-35497691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
74, 164
               

               
Conread position:
               
17-274
               

               
Cow position:
               
chr8:61738543-61738283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
53, 31
               

               
Conread position:
               
17-278
               

               
Cow position:
               
chr8:18945110-18945354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
80, 125
               

               
Conread position:
               
17-294
               

               
Cow position:
               
chr8:5437973-5437692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
70, 243
               

               
Conread position:
               
17-299
               

               
Cow position:
               
chr8:6194194-6193893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
70, 191
               

               
Conread position:
               
17-322
               

               
Cow position:
               
chr8:53360038-53360331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
257, 73
               

               
Conread position:
               
17-339
               

               
Cow position:
               
chr8:28228451-28228118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
81, 39
               

               
Conread position:
               
17-399
               

               
Cow position:
               
chr8:33125703-33125312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
80, 33
               

               
Conread position:
               
17-462
               

               
Cow position:
               
chr8:46203459-46203038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
99, 52
               

               
Conread position:
               
17-469
               

               
Cow position:
               
chr8:25455599-25455151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 47
               

               
Conread position:
               
17-523
               

               
Cow position:
               
chr8:49265109-49265613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
256, 52
               

               
Conread position:
               
18-164
               

               
Cow position:
               
chr8:4557706-4557850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
18-193
               

               
Cow position:
               
chr8:28509245-28509425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
18-198
               

               
Cow position:
               
chr8:27662070-27661884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
18-203
               

               
Cow position:
               
chr8:21961645-21961457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
78, 179
               

               
Conread position:
               
18-209
               

               
Cow position:
               
chr8:11216647-11216843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
18-213
               

               
Cow position:
               
chr8:3762361-3762156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 39
               

               
Conread position:
               
18-213
               

               
Cow position:
               
chr8:32457999-32457796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
18-237
               

               
Cow position:
               
chr8:19785069-19784852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
73, 163
               

               
Conread position:
               
18-243
               

               
Cow position:
               
chr8:5477642-5477867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
6, 187
               

               
Conread position:
               
18-247
               

               
Cow position:
               
chr8:4655931-4656159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
70, 113
               

               
Conread position:
               
18-273
               

               
Cow position:
               
chr8:45860022-45859761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
73, 192
               

               
Conread position:
               
18-282
               

               
Cow position:
               
chr8:20105660-20105927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
73, 192
               

               
Conread position:
               
18-299
               

               
Cow position:
               
chr8:37291875-37292163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
77, 193
               

               
Conread position:
               
18-299
               

               
Cow position:
               
chr8:43942942-43942658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
6, 205
               

               
Conread position:
               
18-357
               

               
Cow position:
               
chr8:38711798-38711454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 205
               

               
Conread position:
               
18-361
               

               
Cow position:
               
chr8:27731251-27730891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 198
               

               
Conread position:
               
18-403
               

               
Cow position:
               
chr8:4500699-4500298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 185
               

               
Conread position:
               
18-408
               

               
Cow position:
               
chr8:27138587-27138983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 32
               

               
Conread position:
               
18-414
               

               
Cow position:
               
chr8:1012173-1011776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 37
               

               
Conread position:
               
18-430
               

               
Cow position:
               
chr8:1620512-1620940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
6, 43
               

               
Conread position:
               
18-458
               

               
Cow position:
               
chr8:37571492-37571951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 184
               

               
Conread position:
               
18-462
               

               
Cow position:
               
chr8:19642678-19642222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 188
               

               
Conread position:
               
18-469
               

               
Cow position:
               
chr8:24512933-24513393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 190
               

               
Conread position:
               
18-469
               

               
Cow position:
               
chr8:46952728-46952275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
52, 191
               

               
Conread position:
               
19-158
               

               
Cow position:
               
chr8:23596560-23596700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
19-175
               

               
Cow position:
               
chr8:51501077-51501240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
19-191
               

               
Cow position:
               
chr8:39545208-39545031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 29
               

               
Conread position:
               
19-199
               

               
Cow position:
               
chr8:19223451-19223637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
19-208
               

               
Cow position:
               
chr8:8772864-8773065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
70, 41
               

               
Conread position:
               
19-208
               

               
Cow position:
               
chr8:55725555-55725755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
5, 155
               

               
Conread position:
               
19-211
               

               
Cow position:
               
chr8:5484360-5484563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
19-213
               

               
Cow position:
               
chr8:53587113-53587309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
48, 82
               

               
Conread position:
               
19-250
               

               
Cow position:
               
chr8:28210196-28209959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
67, 192
               

               
Conread position:
               
19-299
               

               
Cow position:
               
chr8:50024753-50025061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
72, 41
               

               
Conread position:
               
19-437
               

               
Cow position:
               
chr8:39592801-39592366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 197
               

               
Conread position:
               
19-461
               

               
Cow position:
               
chr8:53383605-53383158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 27
               

               
Conread position:
               
19-468
               

               
Cow position:
               
chr8:54052507-54052051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 81
               

               
Conread position:
               
19-469
               

               
Cow position:
               
chr8:38861509-38861950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
237, 53
               

               
Conread position:
               
19-469
               

               
Cow position:
               
chr8:48512816-48513262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 37
               

               
Conread position:
               
19-498
               

               
Cow position:
               
chr8:20107584-20108065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 196
               

               
Conread position:
               
20-194
               

               
Cow position:
               
chr8:57389004-57388825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
58, 164
               

               
Conread position:
               
20-206
               

               
Cow position:
               
chr8:23370111-23370294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
20-254
               

               
Cow position:
               
chr8:58393767-58393534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
77, 44
               

               
Conread position:
               
20-274
               

               
Cow position:
               
chr8:19474871-19475133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
72, 201
               

               
Conread position:
               
20-384
               

               
Cow position:
               
chr8:37635787-37636161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
65, 187
               

               
Conread position:
               
20-459
               

               
Cow position:
               
chr8:1024169-1023715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 176
               

               
Conread position:
               
21-396
               

               
Cow position:
               
chr8:47283859-47284246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
69, 144
               

               
Conread position:
               
21-466
               

               
Cow position:
               
chr8:15390960-15391404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 81
               

               
Conread position:
               
21-468
               

               
Cow position:
               
chr8:10336835-10337282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 181
               

               
Conread position:
               
22-210
               

               
Cow position:
               
chr8:25639898-25640090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
66, 136
               

               
Conread position:
               
22-251
               

               
Cow position:
               
chr8:37443730-37443503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
36, 129
               

               
Conread position:
               
22-284
               

               
Cow position:
               
chr8:33807520-33807786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
50, 73
               

               
Conread position:
               
22-355
               

               
Cow position:
               
chr8:23585754-23586101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
25, 136
               

               
Conread position:
               
22-462
               

               
Cow position:
               
chr8:7609737-7610175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
78, 31
               

               
Conread position:
               
22-462
               

               
Cow position:
               
chr8:19995524-19995978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
71, 203
               

               
Conread position:
               
22-469
               

               
Cow position:
               
chr8:39845812-39845378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 34
               

               
Conread position:
               
22-477
               

               
Cow position:
               
chr8:10456669-10456209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
71, 40
               

               
Conread position:
               
23-273
               

               
Cow position:
               
chr8:46874756-46874507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
72, 157
               

               
Conread position:
               
23-343
               

               
Cow position:
               
chr8:16413607-16413943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
72, 27
               

               
Conread position:
               
23-343
               

               
Cow position:
               
chr8:44700186-44699875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
65, 19
               

               
Conread position:
               
23-357
               

               
Cow position:
               
chr8:935912-935560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
59, 195
               

               
Conread position:
               
23-464
               

               
Cow position:
               
chr8:58520491-58520052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 71
               

               
Conread position:
               
23-469
               

               
Cow position:
               
chr8:13321427-13321855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
63, 138
               

               
Conread position:
               
23-469
               

               
Cow position:
               
chr8:16144339-16143871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
71, 185
               

               
Conread position:
               
24-205
               

               
Cow position:
               
chr8:13732420-13732590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
24-209
               

               
Cow position:
               
chr8:3423211-3423017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 182
               

               
Conread position:
               
24-212
               

               
Cow position:
               
chr8:61739472-61739661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
70, 155
               

               
Conread position:
               
24-296
               

               
Cow position:
               
chr8:6909955-6910234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
67, 50
               

               
Conread position:
               
24-458
               

               
Cow position:
               
chr8:25349907-25349464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 70
               

               
Conread position:
               
24-460
               

               
Cow position:
               
chr8:13221669-13222088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
209, 26
               

               
Conread position:
               
24-468
               

               
Cow position:
               
chr8:59250929-59250472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 175
               

               
Conread position:
               
24-544
               

               
Cow position:
               
chr8:9050854-9051347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
247, 18
               

               
Conread position:
               
24-544
               

               
Cow position:
               
chr8:24867541-24868069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 27
               

               
Conread position:
               
25-468
               

               
Cow position:
               
chr8:30324521-30324073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 94
               

               
Conread position:
               
27-197
               

               
Cow position:
               
chr8:34059960-34060138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
28-207
               

               
Cow position:
               
chr8:8283096-8283286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
28-460
               

               
Cow position:
               
chr8:21212987-21212572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
63, 154
               

               
Conread position:
               
30-439
               

               
Cow position:
               
chr8:8097066-8097495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
65, 12
               

               
Conread position:
               
31-208
               

               
Cow position:
               
chr8:58598835-58598653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
60, 151
               

               
Conread position:
               
31-299
               

               
Cow position:
               
chr8:16505686-16505418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
59, 44
               

               
Conread position:
               
31-356
               

               
Cow position:
               
chr8:6073622-6073961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
25, 172
               

               
Conread position:
               
31-437
               

               
Cow position:
               
chr8:50310654-50311071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 178
               

               
Conread position:
               
31-469
               

               
Cow position:
               
chr8:2163723-2164162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 68
               

               
Conread position:
               
34-282
               

               
Cow position:
               
chr8:17247414-17247172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
5, 77
               

               
Conread position:
               
35-193
               

               
Cow position:
               
chr8:27774086-27774245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
35-469
               

               
Cow position:
               
chr8:1999826-1999369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
60, 236
               

               
Conread position:
               
35-479
               

               
Cow position:
               
chr8:18081722-18081273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 143
               

               
Conread position:
               
39-464
               

               
Cow position:
               
chr8:60488449-60488878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
201, 91
               

               
Conread position:
               
40-465
               

               
Cow position:
               
chr8:45781497-45781918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
234, 25
               

               
Conread position:
               
41-295
               

               
Cow position:
               
chr8:61067474-61067219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
53, 141
               

               
Conread position:
               
50-544
               

               
Cow position:
               
chr8:35580457-35580954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
45, 156
               

               
Conread position:
               
52-299
               

               
Cow position:
               
chr8:9652844-9652599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 126
               

               
Conread position:
               
56-239
               

               
Cow position:
               
chr8:55853503-55853324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
31, 109
               

               
Conread position:
               
58-469
               

               
Cow position:
               
chr8:20339434-20339030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 18
               

               
Conread position:
               
70-299
               

               
Cow position:
               
chr8:13723559-13723332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
7, 55
               

               
Conread position:
               
71-308
               

               
Cow position:
               
chr8:3922565-3922798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
29, 129
               

               
Conread position:
               
71-469
               

               
Cow position:
               
chr8:37882492-37882070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 22
               

               
Conread position:
               
71-488
               

               
Cow position:
               
chr8:7149550-7149961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 81
               

               
Conread position:
               
78-208
               

               
Cow position:
               
chr8:5546281-5546151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
85-215
               

               
Cow position:
               
chr8:47969145-47969274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
85-299
               

               
Cow position:
               
chr8:21858582-21858784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
153, 114
               

               
Conread position:
               
85-544
               

               
Cow position:
               
chr8:42794187-42794645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 10
               

               
Conread position:
               
87-267
               

               
Cow position:
               
chr8:51162402-51162577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
152, 8
               

               
Conread position:
               
87-299
               

               
Cow position:
               
chr8:49656298-49656503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
153, 8
               

               
Conread position:
               
87-409
               

               
Cow position:
               
chr8:39174109-39174445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
68, 8
               

               
Conread position:
               
87-466
               

               
Cow position:
               
chr8:11606460-11606082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 110
               

               
Conread position:
               
88-273
               

               
Cow position:
               
chr8:25751740-25751919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
10, 86
               

               
Conread position:
               
88-333
               

               
Cow position:
               
chr8:3673501-3673253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
10, 86
               

               
Conread position:
               
90-213
               

               
Cow position:
               
chr8:54197747-54197871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
91-201
               

               
Cow position:
               
chr8:11148510-11148620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
91-208
               

               
Cow position:
               
chr8:26694962-26694845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
91-209
               

               
Cow position:
               
chr8:36490000-36489881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
91-239
               

               
Cow position:
               
chr8:31762667-31762528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
7, 83
               

               
Conread position:
               
91-251
               

               
Cow position:
               
chr8:53965346-53965503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
7, 109
               

               
Conread position:
               
91-273
               

               
Cow position:
               
chr8:18647233-18647409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
7, 70
               

               
Conread position:
               
91-299
               

               
Cow position:
               
chr8:22183847-22183635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 117
               

               
Conread position:
               
91-299
               

               
Cow position:
               
chr8:25388268-25388065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
147, 93
               

               
Conread position:
               
91-301
               

               
Cow position:
               
chr8:6616660-6616871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
7, 118
               

               
Conread position:
               
91-318
               

               
Cow position:
               
chr8:12795955-12795731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
7, 120
               

               
Conread position:
               
91-321
               

               
Cow position:
               
chr8:33805654-33805431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
7, 107
               

               
Conread position:
               
91-464
               

               
Cow position:
               
chr8:4940188-4940559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 47
               

               
Conread position:
               
91-467
               

               
Cow position:
               
chr8:28884968-28884573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
91-477
               

               
Cow position:
               
chr8:43167897-43168286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 104
               

               
Conread position:
               
91-488
               

               
Cow position:
               
chr8:45127572-45127972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 107
               

               
Conread position:
               
92-469
               

               
Cow position:
               
chr8:40888072-40888451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
183, 118
               

               
Conread position:
               
93-299
               

               
Cow position:
               
chr8:40579287-40579489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
178, 10
               

               
Conread position:
               
93-439
               

               
Cow position:
               
chr8:28313594-28313950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
155, 116
               

               
Conread position:
               
93-450
               

               
Cow position:
               
chr8:29624841-29625200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
173, 100
               

               
Conread position:
               
93-469
               

               
Cow position:
               
chr8:537785-538170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 106
               

               
Conread position:
               
93-469
               

               
Cow position:
               
chr8:18730575-18730183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 104
               

               
Conread position:
               
93-485
               

               
Cow position:
               
chr8:61842092-61841728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 64
               

               
Conread position:
               
94-300
               

               
Cow position:
               
chr8:52968183-52968377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
94-464
               

               
Cow position:
               
chr8:60746768-60746394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 105
               

               
Conread position:
               
94-467
               

               
Cow position:
               
chr8:1297637-1297263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 105
               

               
Conread position:
               
95-240
               

               
Cow position:
               
chr8:33926284-33926139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
101, 112
               

               
Conread position:
               
95-379
               

               
Cow position:
               
chr8:37862697-37862420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
176, 99
               

               
Conread position:
               
96-213
               

               
Cow position:
               
chr8:10846364-10846247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
96-299
               

               
Cow position:
               
chr8:60575934-60576128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
178, 62
               

               
Conread position:
               
96-464
               

               
Cow position:
               
chr8:11078984-11078620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
144, 45
               

               
Conread position:
               
97-213
               

               
Cow position:
               
chr8:32304052-32303936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
97-297
               

               
Cow position:
               
chr8:17167694-17167491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
176, 0
               

               
Conread position:
               
97-299
               

               
Cow position:
               
chr8:40143728-40143930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
141, 99
               

               
Conread position:
               
97-315
               

               
Cow position:
               
chr8:49659251-49659039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
144, 19
               

               
Conread position:
               
97-450
               

               
Cow position:
               
chr8:20157636-20157996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
141, 99
               

               
Conread position:
               
97-460
               

               
Cow position:
               
chr8:21077707-21077352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
143, 68
               

               
Conread position:
               
97-462
               

               
Cow position:
               
chr8:38682002-38681631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
142, 102
               

               
Conread position:
               
97-468
               

               
Cow position:
               
chr8:47461983-47461610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 101
               

               
Conread position:
               
98-197
               

               
Cow position:
               
chr8:56580732-56580633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
98-243
               

               
Cow position:
               
chr8:43104171-43104311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
141, 77
               

               
Conread position:
               
98-252
               

               
Cow position:
               
chr8:36372443-36372603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
98-301
               

               
Cow position:
               
chr8:54147789-54147585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
173, 139
               

               
Conread position:
               
98-462
               

               
Cow position:
               
chr8:24390073-24390443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 60
               

               
Conread position:
               
98-469
               

               
Cow position:
               
chr8:20837242-20836872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 7
               

               
Conread position:
               
99-203
               

               
Cow position:
               
chr8:60594976-60594872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
99-207
               

               
Cow position:
               
chr8:14109512-14109404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
99-447
               

               
Cow position:
               
chr8:53558487-53558836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
50, 78
               

               
Conread position:
               
100-475
               

               
Cow position:
               
chr8:38596103-38596473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 80
               

               
Conread position:
               
100-501
               

               
Cow position:
               
chr8:10263044-10263449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 85
               

               
Conread position:
               
101-237
               

               
Cow position:
               
chr8:3593779-3593649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
101-299
               

               
Cow position:
               
chr8:26304271-26304466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
170, 101
               

               
Conread position:
               
102-437
               

               
Cow position:
               
chr8:21382572-21382918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
138, 94
               

               
Conread position:
               
105-463
               

               
Cow position:
               
chr8:9705717-9705357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
202, 123
               

               
Conread position:
               
115-299
               

               
Cow position:
               
chr8:34171981-34171799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
160, 97
               

               
Conread position:
               
125-441
               

               
Cow position:
               
chr8:5224949-5225264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
146, 52
               

               
Conread position:
               
127-393
               

               
Cow position:
               
chr8:21083196-21083474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
22, 86
               

               
Conread position:
               
155-468
               

               
Cow position:
               
chr8:23026770-23026446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
42, 89
               

               
Conread position:
               
163-464
               

               
Cow position:
               
chr8:31253871-31253560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
76, 18
               

               
Conread position:
               
163-469
               

               
Cow position:
               
chr8:24832438-24832117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
31, 49
               

               
Conread position:
               
172-436
               

               
Cow position:
               
chr8:59438231-59438505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
79, 27
               

               
Conread position:
               
183-469
               

               
Cow position:
               
chr8:21961285-21960995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
102, 26
               

               
Conread position:
               
205-461
               

               
Cow position:
               
chr8:35966006-35966280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
34, 253
               

               
Conread position:
               
206-462
               

               
Cow position:
               
chr8:53964725-53964987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
35, 144
               

               
Conread position:
               
207-437
               

               
Cow position:
               
chr8:36465226-36464982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
68, 190
               

               
Conread position:
               
207-460
               

               
Cow position:
               
chr8:1834941-1834675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
68, 170
               

               
Conread position:
               
207-469
               

               
Cow position:
               
chr8:843939-844191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
33, 43
               

               
Conread position:
               
207-483
               

               
Cow position:
               
chr8:24952368-24952066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
45, 186
               

               
Conread position:
               
211-469
               

               
Cow position:
               
chr8:55726272-55726519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
39, 56
               

               
Conread position:
               
270-469
               

               
Cow position:
               
chr8:33585104-33584903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
18, 93
               

               
Conread position:
               
290-542
               

               
Cow position:
               
chr8:32719893-32719643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
159, 53
               

               
Conread position:
               
294-462
               

               
Cow position:
               
chr8:53320896-53320728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
297-543
               

               
Cow position:
               
chr8:31727425-31727192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
174, 0
               

               
Conread position:
               
297-544
               

               
Cow position:
               
chr8:58346715-58346482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
164, 44
               

               
Conread position:
               
315-542
               

               
Cow position:
               
chr8:58385562-58385343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
157, 48
               

               
Conread position:
               
326-544
               

               
Cow position:
               
chr8:9288133-9287920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
45, 0
               
Show alignments to all cow chromosomes.