Cow genome map

Conread name: rthg25_d8.y1

Conread position: 136-499
Cow position: chr1:6940033-6939685 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 251
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 42, 84

Conread position: 136-500
Cow position: chr1:34857049-34856677 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 241
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 42, 258

Conread position: 136-501
Cow position: chr1:68827321-68826950 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 193

Conread position: 137-501
Cow position: chr1:52955877-52956208 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 78

Conread position: 144-501
Cow position: chr1:95327549-95327196 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 104

Conread position: 246-497
Cow position: chr1:95765385-95765139 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 0

Conread position: 246-501
Cow position: chr1:34685899-34686145 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 253-501
Cow position: chr1:57635178-57635416 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 254-499
Cow position: chr1:74947405-74947170 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 98, 0

Conread position: 254-501
Cow position: chr1:3924081-3923840 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 185
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 22, 0

Conread position: 254-501
Cow position: chr1:63905762-63905517 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 258-495
Cow position: chr1:61884631-61884863 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 204

Conread position: 258-498
Cow position: chr1:11770576-11770338 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 31

Conread position: 258-499
Cow position: chr1:53039983-53039748 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 210, 80

Conread position: 262-501
Cow position: chr1:6958599-6958831 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 264-501
Cow position: chr1:71818737-71818503 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 264-501
Cow position: chr1:82338063-82337826 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 83

Conread position: 266-501
Cow position: chr1:79278710-79278492 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 179
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 35, 0

Conread position: 267-501
Cow position: chr1:3790331-3790111 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 116, 0

Conread position: 267-501
Cow position: chr1:100741022-100741241 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 268-492
Cow position: chr1:81343522-81343748 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 95, 156

Conread position: 268-497
Cow position: chr1:56748316-56748545 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 51

Conread position: 268-500
Cow position: chr1:68818070-68817845 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 268-501
Cow position: chr1:45535428-45535660 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 269-507
Cow position: chr1:72141291-72141525 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 176, 114

Conread position: 270-499
Cow position: chr1:78795007-78794789 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 155, 50

Conread position: 270-501
Cow position: chr1:6941194-6941418 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 272-499
Cow position: chr1:97620110-97619884 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 272-500
Cow position: chr1:75744590-75744814 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 272-501
Cow position: chr1:3137662-3137884 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 67

Conread position: 274-493
Cow position: chr1:81180248-81180027 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 0

Conread position: 274-498
Cow position: chr1:81868995-81868776 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 67, 120

Conread position: 274-500
Cow position: chr1:64251317-64251100 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 177
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 46, 0

Conread position: 275-499
Cow position: chr1:21787059-21787283 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 276-493
Cow position: chr1:53613447-53613248 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 167, 40

Conread position: 276-499
Cow position: chr1:19465796-19466009 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 116, 0

Conread position: 276-501
Cow position: chr1:57297230-57297431 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 160, 25

Conread position: 277-471
Cow position: chr1:99222098-99221902 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 13, 117

Conread position: 277-485
Cow position: chr1:22826905-22827106 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 277-493
Cow position: chr1:31899796-31899585 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 63

Conread position: 277-501
Cow position: chr1:55146536-55146757 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 277-501
Cow position: chr1:96713079-96712856 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 159, 114

Conread position: 278-486
Cow position: chr1:37309768-37309573 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 161
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 165, 33

Conread position: 278-493
Cow position: chr1:31348172-31347969 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 164, 32

Conread position: 278-501
Cow position: chr1:84116138-84116351 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 162, 44

Conread position: 279-468
Cow position: chr1:5597462-5597276 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 110
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 82, 0

Conread position: 279-500
Cow position: chr1:37322269-37322048 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 94

Conread position: 280-492
Cow position: chr1:69445110-69445310 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 39, 0

Conread position: 280-493
Cow position: chr1:12596163-12595957 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 280-501
Cow position: chr1:21835686-21835898 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 172
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 111, 0

Conread position: 280-501
Cow position: chr1:90868698-90868486 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 172
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 88, 0

Conread position: 280-501
Cow position: chr1:97806530-97806743 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 173
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 71, 0

Conread position: 281-458
Cow position: chr1:51983332-51983496 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 281-484
Cow position: chr1:8361-8560 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 161, 121

Conread position: 281-490
Cow position: chr1:57576024-57575815 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 103, 20

Conread position: 281-493
Cow position: chr1:23488774-23488560 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 149, 132

Conread position: 281-494
Cow position: chr1:52496515-52496731 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 46, 115

Conread position: 281-501
Cow position: chr1:38278306-38278076 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 177
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 133, 41

Conread position: 281-501
Cow position: chr1:57525077-57524862 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 156, 97

Conread position: 281-501
Cow position: chr1:89742273-89742041 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 94, 0

Conread position: 281-504
Cow position: chr1:1801883-1802096 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 161, 38

Conread position: 282-470
Cow position: chr1:73756833-73757012 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 74, 97

Conread position: 282-477
Cow position: chr1:85774199-85774391 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 154
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 131, 0

Conread position: 282-484
Cow position: chr1:41056424-41056620 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 160
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 70, 0

Conread position: 282-484
Cow position: chr1:52488218-52488023 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 156, 38

Conread position: 282-484
Cow position: chr1:52753426-52753225 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 160
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 159, 109

Conread position: 282-486
Cow position: chr1:81290258-81290447 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 282-488
Cow position: chr1:55686479-55686275 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 162
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 53, 64

Conread position: 282-490
Cow position: chr1:68253331-68253535 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 160
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 110, 0

Conread position: 282-492
Cow position: chr1:33719854-33720065 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 165
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 154, 37

Conread position: 282-492
Cow position: chr1:36997937-36998142 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 160, 42

Conread position: 282-492
Cow position: chr1:56719053-56719257 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 70

Conread position: 282-495
Cow position: chr1:77720487-77720286 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 20, 0

Conread position: 282-497
Cow position: chr1:5873231-5873020 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 171
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 160, 40

Conread position: 282-497
Cow position: chr1:60032858-60032647 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 155, 48

Conread position: 282-497
Cow position: chr1:72286309-72286106 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 169
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 37, 0

Conread position: 282-497
Cow position: chr1:100705872-100706084 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 13, 38

Conread position: 282-498
Cow position: chr1:33811674-33811881 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 282-498
Cow position: chr1:40599792-40599995 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 37, 0

Conread position: 282-498
Cow position: chr1:97755266-97755468 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 282-499
Cow position: chr1:197262-197055 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 166
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 48, 0

Conread position: 282-499
Cow position: chr1:26930233-26930018 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 18, 0

Conread position: 282-499
Cow position: chr1:51394159-51394368 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 64, 114

Conread position: 282-499
Cow position: chr1:102647529-102647319 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 171
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 160, 107

Conread position: 282-500
Cow position: chr1:666100-666319 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 142, 107

Conread position: 282-500
Cow position: chr1:21092831-21093046 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 125, 0

Conread position: 282-500
Cow position: chr1:21460610-21460823 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 154, 22

Conread position: 282-500
Cow position: chr1:52039377-52039586 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 282-500
Cow position: chr1:52329788-52329574 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 159, 13

Conread position: 282-500
Cow position: chr1:53458445-53458650 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 38, 102

Conread position: 282-500
Cow position: chr1:64818150-64817931 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 148
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 155, 0

Conread position: 282-500
Cow position: chr1:71946630-71946421 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 37, 0

Conread position: 282-500
Cow position: chr1:81613125-81613343 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 282-500
Cow position: chr1:82884645-82884436 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 282-500
Cow position: chr1:85028701-85028906 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 37, 0

Conread position: 282-500
Cow position: chr1:95499755-95499540 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 37, 0

Conread position: 282-501
Cow position: chr1:22448844-22448632 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 171
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 39, 0

Conread position: 282-501
Cow position: chr1:26896085-26895872 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 109, 0

Conread position: 282-501
Cow position: chr1:41181581-41181800 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 37, 99

Conread position: 282-501
Cow position: chr1:51628762-51628544 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 173
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 159, 181

Conread position: 282-501
Cow position: chr1:52506804-52506600 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 173
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 160, 48

Conread position: 282-501
Cow position: chr1:53374175-53374386 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 172
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 154, 109

Conread position: 282-501
Cow position: chr1:53495202-53495423 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 282-501
Cow position: chr1:53622705-53622914 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 154, 37

Conread position: 282-501
Cow position: chr1:60707143-60707358 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 152, 110

Conread position: 282-501
Cow position: chr1:61725373-61725157 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 166, 0

Conread position: 282-501
Cow position: chr1:73960440-73960660 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 282-501
Cow position: chr1:79590840-79591062 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 0

Conread position: 282-501
Cow position: chr1:82861513-82861736 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 173
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 0

Conread position: 282-501
Cow position: chr1:84240640-84240847 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 37, 0

Conread position: 282-501
Cow position: chr1:84282801-84283029 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 48, 0

Conread position: 282-501
Cow position: chr1:87888143-87888355 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 12, 0

Conread position: 282-501
Cow position: chr1:90864560-90864338 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 166, 0

Conread position: 282-501
Cow position: chr1:96964059-96964275 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 28, 110

Conread position: 282-501
Cow position: chr1:98380837-98380617 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 154, 132

Conread position: 282-501
Cow position: chr1:99136690-99136476 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 282-503
Cow position: chr1:4374598-4374382 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 176
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 160, 37

Conread position: 282-503
Cow position: chr1:77620290-77620501 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 86, 0

Conread position: 282-504
Cow position: chr1:11772341-11772117 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 159, 208

Conread position: 282-507
Cow position: chr1:61494617-61494843 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 122, 127

Conread position: 282-507
Cow position: chr1:99837346-99837122 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 155, 64

Conread position: 283-471
Cow position: chr1:53397725-53397916 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 155
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 37, 0

Conread position: 283-472
Cow position: chr1:15547210-15547396 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 150
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 154, 36

Conread position: 283-499
Cow position: chr1:88652372-88652583 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 283-500
Cow position: chr1:39069210-39069001 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 283-500
Cow position: chr1:68782905-68782688 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 101, 36

Conread position: 283-501
Cow position: chr1:76470400-76470610 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 160, 98

Conread position: 283-501
Cow position: chr1:91066407-91066198 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 40, 0

Conread position: 283-501
Cow position: chr1:101822755-101822547 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 154, 27

Conread position: 283-509
Cow position: chr1:22628898-22628675 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 37, 88

Conread position: 284-474
Cow position: chr1:64678439-64678629 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 150
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 284-497
Cow position: chr1:26688736-26688524 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 96, 0

Conread position: 284-498
Cow position: chr1:44125895-44125695 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 284-499
Cow position: chr1:32341465-32341256 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 284-499
Cow position: chr1:44836486-44836271 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 157, 27

Conread position: 284-501
Cow position: chr1:19998293-19998086 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 165
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 35, 0

Conread position: 284-501
Cow position: chr1:24235776-24235562 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 284-501
Cow position: chr1:87216204-87216414 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 168
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 39, 10

Conread position: 284-502
Cow position: chr1:57639778-57639567 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 168
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 35, 0

Conread position: 284-504
Cow position: chr1:54478064-54478282 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 30, 109

Conread position: 285-500
Cow position: chr1:47008770-47008985 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 170
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 28, 125

Conread position: 285-501
Cow position: chr1:85596685-85596896 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 21, 89

Conread position: 286-482
Cow position: chr1:732181-731998 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 105, 0

Conread position: 286-499
Cow position: chr1:56225221-56225419 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 167
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 25, 0

Conread position: 286-499
Cow position: chr1:90423342-90423131 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 157, 0

Conread position: 286-501
Cow position: chr1:48731084-48730873 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 166
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 125, 55

Conread position: 287-497
Cow position: chr1:7350283-7350493 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 287-501
Cow position: chr1:54199635-54199427 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 33

Conread position: 287-501
Cow position: chr1:61246406-61246204 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 287-504
Cow position: chr1:4032379-4032586 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 155, 91

Conread position: 288-493
Cow position: chr1:94211980-94212181 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 160
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 148, 31

Conread position: 288-495
Cow position: chr1:68276153-68276364 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 153, 35

Conread position: 288-497
Cow position: chr1:10778320-10778517 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 164
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 31, 0

Conread position: 288-499
Cow position: chr1:56711872-56711666 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 164
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 154, 31

Conread position: 288-499
Cow position: chr1:77462110-77462313 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 162
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 16, 40

Conread position: 288-500
Cow position: chr1:22728793-22729005 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 288-500
Cow position: chr1:80869852-80870069 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 124, 0

Conread position: 288-500
Cow position: chr1:98562906-98563116 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 31

Conread position: 288-501
Cow position: chr1:1956583-1956379 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 169
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 41, 104

Conread position: 288-501
Cow position: chr1:37707223-37707019 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 170
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 138, 168

Conread position: 288-501
Cow position: chr1:44164825-44165037 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 31, 0

Conread position: 288-501
Cow position: chr1:45555108-45555319 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 170
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 54, 32

Conread position: 288-501
Cow position: chr1:46940116-46939904 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 97

Conread position: 288-501
Cow position: chr1:49795746-49795955 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 166
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 26, 120

Conread position: 288-501
Cow position: chr1:61564537-61564751 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 288-501
Cow position: chr1:61724279-61724067 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 172
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 157, 95

Conread position: 288-501
Cow position: chr1:63391026-63390816 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 153, 22

Conread position: 288-501
Cow position: chr1:69539445-69539652 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 166
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 31, 0

Conread position: 288-501
Cow position: chr1:88338443-88338643 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 164
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 32, 0

Conread position: 288-501
Cow position: chr1:92370613-92370404 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 153, 24

Conread position: 288-501
Cow position: chr1:94226802-94226597 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 169
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 105, 0

Conread position: 288-501
Cow position: chr1:100421589-100421787 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 166
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 82, 0

Conread position: 288-501
Cow position: chr1:100551716-100551924 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 155, 103

Conread position: 289-474
Cow position: chr1:85162800-85162616 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 42, 0

Conread position: 289-475
Cow position: chr1:1916489-1916306 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 31, 103

Conread position: 289-480
Cow position: chr1:5135944-5135760 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 31, 0

Conread position: 289-495
Cow position: chr1:3456619-3456819 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 159
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 81, 0

Conread position: 289-499
Cow position: chr1:35162151-35162362 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 167
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 146, 30

Conread position: 289-500
Cow position: chr1:8532465-8532260 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 147, 5

Conread position: 289-501
Cow position: chr1:3776867-3776663 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 147, 103

Conread position: 289-501
Cow position: chr1:36931906-36932112 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 162
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 102, 0

Conread position: 289-501
Cow position: chr1:100450443-100450226 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 38, 107

Conread position: 289-504
Cow position: chr1:102469218-102469008 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 33, 105

Conread position: 290-470
Cow position: chr1:42874199-42874023 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 146
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 102, 0

Conread position: 290-475
Cow position: chr1:40062196-40062381 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 290-482
Cow position: chr1:3757700-3757892 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 151, 106

Conread position: 290-484
Cow position: chr1:56229002-56229191 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 154
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 181, 101

Conread position: 290-488
Cow position: chr1:81363742-81363926 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 151, 30

Conread position: 290-490
Cow position: chr1:62964027-62964221 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 159
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 90, 0

Conread position: 290-491
Cow position: chr1:63596312-63596109 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 151, 142

Conread position: 290-492
Cow position: chr1:95017765-95017573 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 158
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 39, 0

Conread position: 290-493
Cow position: chr1:4589733-4589527 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 83, 113

Conread position: 290-493
Cow position: chr1:20125358-20125560 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 24, 116

Conread position: 290-493
Cow position: chr1:54207068-54206872 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 41, 0

Conread position: 290-493
Cow position: chr1:64160089-64160287 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 157, 29

Conread position: 290-495
Cow position: chr1:78810784-78810988 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 159
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 29, 0

Conread position: 290-496
Cow position: chr1:23969289-23969087 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 159
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 79, 103

Conread position: 290-498
Cow position: chr1:22745375-22745576 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 147, 44

Conread position: 290-498
Cow position: chr1:81569288-81569079 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 22, 0

Conread position: 290-498
Cow position: chr1:101915917-101916124 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 147, 30

Conread position: 290-499
Cow position: chr1:24133307-24133106 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 166
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 29, 0

Conread position: 290-499
Cow position: chr1:42256762-42256550 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 64, 0

Conread position: 290-499
Cow position: chr1:71295560-71295353 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 165
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 128, 44

Conread position: 290-499
Cow position: chr1:78783294-78783500 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 170
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 150, 102

Conread position: 290-500
Cow position: chr1:14379782-14379581 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 67, 0

Conread position: 290-500
Cow position: chr1:41004619-41004409 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 44

Conread position: 290-500
Cow position: chr1:42555018-42555217 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 165
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 152, 29

Conread position: 290-500
Cow position: chr1:48105686-48105480 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 290-500
Cow position: chr1:70380398-70380190 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 165
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 193, 80

Conread position: 290-500
Cow position: chr1:95215438-95215227 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 290-500
Cow position: chr1:99095111-99095316 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 167
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 152, 82

Conread position: 290-501
Cow position: chr1:8349563-8349362 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 166
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 152, 101

Conread position: 290-501
Cow position: chr1:31765647-31765432 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 165
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 158, 30

Conread position: 290-501
Cow position: chr1:33701868-33702073 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 147, 102

Conread position: 290-501
Cow position: chr1:33997164-33996963 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 144, 0

Conread position: 290-501
Cow position: chr1:34000653-34000867 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 148, 0

Conread position: 290-501
Cow position: chr1:36613527-36613320 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 165
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 101, 0

Conread position: 290-501
Cow position: chr1:54258315-54258517 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 164
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 147, 99

Conread position: 290-501
Cow position: chr1:57305580-57305786 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 146, 101

Conread position: 290-501
Cow position: chr1:61392043-61391834 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 164
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 29, 0

Conread position: 290-501
Cow position: chr1:67821462-67821256 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 167
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 93, 0

Conread position: 290-501
Cow position: chr1:68217612-68217409 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 28, 102

Conread position: 290-501
Cow position: chr1:72012055-72011854 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 150, 29

Conread position: 290-501
Cow position: chr1:72035181-72034969 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 57

Conread position: 290-501
Cow position: chr1:73584654-73584456 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 165
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 72, 0

Conread position: 290-501
Cow position: chr1:76222943-76222735 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 150, 102

Conread position: 290-501
Cow position: chr1:81355955-81355754 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 169
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 29, 0

Conread position: 290-501
Cow position: chr1:82504715-82504931 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 169
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 111, 29

Conread position: 290-501
Cow position: chr1:86113665-86113450 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 167
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 156, 83

Conread position: 290-501
Cow position: chr1:91817026-91816817 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 172

Conread position: 290-504
Cow position: chr1:11873607-11873404 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 169
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 20, 0

Conread position: 290-504
Cow position: chr1:56657789-56657990 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 146, 30

Conread position: 290-508
Cow position: chr1:100800105-100800318 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 168
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 29, 0

Conread position: 291-480
Cow position: chr1:1185488-1185677 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 94, 101

Conread position: 291-484
Cow position: chr1:11914128-11913939 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 151, 28

Conread position: 291-495
Cow position: chr1:101634450-101634653 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 291-497
Cow position: chr1:43893677-43893875 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 57, 29

Conread position: 291-498
Cow position: chr1:98360665-98360446 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 169
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 23, 0

Conread position: 291-499
Cow position: chr1:86325862-86325655 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 143
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 178, 121

Conread position: 291-500
Cow position: chr1:1403721-1403527 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 42, 0

Conread position: 291-500
Cow position: chr1:43505272-43505478 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 291-500
Cow position: chr1:47233726-47233525 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 161
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 98, 0

Conread position: 291-500
Cow position: chr1:57900992-57900786 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 102

Conread position: 291-500
Cow position: chr1:89349726-89349916 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 85, 0

Conread position: 291-501
Cow position: chr1:43352900-43352703 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 165
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 134, 20

Conread position: 291-501
Cow position: chr1:63435054-63434851 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 164
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 147, 29

Conread position: 291-501
Cow position: chr1:68282543-68282757 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 34, 0

Conread position: 291-501
Cow position: chr1:75967185-75967386 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 291-501
Cow position: chr1:89395340-89395556 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 168
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 20, 0

Conread position: 291-501
Cow position: chr1:99642621-99642411 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 86, 107

Conread position: 291-501
Cow position: chr1:100400452-100400241 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 157, 28

Conread position: 291-508
Cow position: chr1:16767336-16767121 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 149, 0

Conread position: 292-501
Cow position: chr1:59518652-59518873 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 88, 15

Conread position: 292-502
Cow position: chr1:52994774-52994976 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 293-501
Cow position: chr1:102350007-102349799 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 165
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 81, 118

Conread position: 294-453
Cow position: chr1:58439294-58439143 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 127
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 294-468
Cow position: chr1:42138617-42138789 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 114

Conread position: 294-477
Cow position: chr1:13614967-13614782 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 145, 65

Conread position: 294-483
Cow position: chr1:33716973-33717165 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 152
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 147, 0

Conread position: 294-483
Cow position: chr1:74013515-74013322 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 135, 0

Conread position: 294-484
Cow position: chr1:3323610-3323809 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 141, 83

Conread position: 294-484
Cow position: chr1:41252651-41252463 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 151
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 97, 144

Conread position: 294-493
Cow position: chr1:24655712-24655910 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 160
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 149, 36

Conread position: 294-496
Cow position: chr1:92963150-92963345 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 148, 97

Conread position: 294-497
Cow position: chr1:13413779-13413980 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 25, 0

Conread position: 294-497
Cow position: chr1:55135588-55135783 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 294-497
Cow position: chr1:96478447-96478648 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 147, 97

Conread position: 294-498
Cow position: chr1:34159584-34159789 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 165
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 142, 25

Conread position: 294-498
Cow position: chr1:91142402-91142202 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 148, 26

Conread position: 294-499
Cow position: chr1:28567686-28567480 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 26

Conread position: 294-499
Cow position: chr1:39418366-39418168 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 162
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 148, 25

Conread position: 294-499
Cow position: chr1:78791555-78791353 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 27, 90

Conread position: 294-499
Cow position: chr1:78857570-78857369 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 294-499
Cow position: chr1:89510180-89509970 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 166
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 124, 25

Conread position: 294-500
Cow position: chr1:20204778-20204982 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 161
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 142, 102

Conread position: 294-500
Cow position: chr1:50679534-50679329 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 161
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 147, 97

Conread position: 294-500
Cow position: chr1:68619185-68618979 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 48

Conread position: 294-500
Cow position: chr1:69695257-69695038 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 85, 0

Conread position: 294-500
Cow position: chr1:70538355-70538561 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 161
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 294-500
Cow position: chr1:74822203-74822403 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 165, 0

Conread position: 294-500
Cow position: chr1:80899860-80900071 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 133, 25

Conread position: 294-500
Cow position: chr1:81563485-81563690 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 294-500
Cow position: chr1:82936830-82936638 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 159
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 97, 0

Conread position: 294-500
Cow position: chr1:84255506-84255717 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 0

Conread position: 294-500
Cow position: chr1:99609118-99609322 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 25

Conread position: 294-501
Cow position: chr1:3340689-3340890 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 162
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 170, 0

Conread position: 294-501
Cow position: chr1:11853938-11853730 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 142, 0

Conread position: 294-501
Cow position: chr1:21954466-21954277 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 97, 0

Conread position: 294-501
Cow position: chr1:31934265-31934467 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 150, 76

Conread position: 294-501
Cow position: chr1:42968564-42968360 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 163
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 108, 12

Conread position: 294-501
Cow position: chr1:44136710-44136511 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 160
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 113, 0

Conread position: 294-501
Cow position: chr1:45289121-45288917 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 36

Conread position: 294-501
Cow position: chr1:57396177-57395975 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 25, 100

Conread position: 294-501
Cow position: chr1:73561897-73561695 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 148, 11

Conread position: 294-501
Cow position: chr1:79165340-79165130 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 294-501
Cow position: chr1:98708194-98708395 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 162
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 97, 0

Conread position: 294-501
Cow position: chr1:101547290-101547078 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 143, 33

Conread position: 294-505
Cow position: chr1:39427229-39427043 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 295-497
Cow position: chr1:28176753-28176960 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 144, 25

Conread position: 295-501
Cow position: chr1:3244603-3244802 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 71, 100

Conread position: 295-501
Cow position: chr1:56477348-56477542 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 24, 0

Conread position: 296-486
Cow position: chr1:83583186-83582995 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 22, 151

Conread position: 296-491
Cow position: chr1:18937080-18936884 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 157
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 143, 0

Conread position: 296-493
Cow position: chr1:92369470-92369679 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 165
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 54, 23

Conread position: 296-498
Cow position: chr1:81277447-81277251 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 144, 23

Conread position: 296-499
Cow position: chr1:25793686-25793482 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 36, 168

Conread position: 296-499
Cow position: chr1:71253801-71253600 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 100, 0

Conread position: 296-500
Cow position: chr1:51531527-51531720 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 166
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 146, 74

Conread position: 296-501
Cow position: chr1:48580884-48581086 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 121

Conread position: 296-501
Cow position: chr1:98594325-98594527 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 140, 26

Conread position: 296-506
Cow position: chr1:58419686-58419898 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 141, 0

Conread position: 297-483
Cow position: chr1:32631220-32631404 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 148
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 9, 91

Conread position: 297-499
Cow position: chr1:6077649-6077852 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 189, 0

Conread position: 297-501
Cow position: chr1:874398-874605 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 150, 65

Conread position: 297-501
Cow position: chr1:21508141-21508346 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 9, 91

Conread position: 297-501
Cow position: chr1:71119266-71119471 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 156, 71

Conread position: 297-501
Cow position: chr1:90640780-90640986 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 22

Conread position: 297-508
Cow position: chr1:84239352-84239151 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 163
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 105, 0

Conread position: 298-501
Cow position: chr1:51445635-51445834 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 160
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 143, 93

Conread position: 298-509
Cow position: chr1:30504227-30504434 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 302-474
Cow position: chr1:92197220-92197392 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 83, 67

Conread position: 302-479
Cow position: chr1:98577235-98577409 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 16, 83

Conread position: 302-480
Cow position: chr1:19482314-19482145 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 18, 82

Conread position: 302-484
Cow position: chr1:70434752-70434941 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 153
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 18, 0

Conread position: 302-484
Cow position: chr1:97761386-97761560 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 170, 94

Conread position: 302-493
Cow position: chr1:31235174-31234980 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 16, 0

Conread position: 302-497
Cow position: chr1:5409854-5409663 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 135, 90

Conread position: 302-498
Cow position: chr1:95056815-95057007 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 158
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 89, 0

Conread position: 302-499
Cow position: chr1:8869904-8869710 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 59, 22

Conread position: 302-499
Cow position: chr1:14528440-14528243 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 168, 141

Conread position: 302-500
Cow position: chr1:3035233-3035039 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 158
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 81, 0

Conread position: 302-500
Cow position: chr1:41696817-41697012 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 302-500
Cow position: chr1:44769350-44769159 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 155
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 18, 0

Conread position: 302-500
Cow position: chr1:71079193-71079004 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 156
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 22, 0

Conread position: 302-500
Cow position: chr1:83082762-83082959 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 65, 32

Conread position: 302-500
Cow position: chr1:94403976-94404166 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 157
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 84, 0

Conread position: 302-501
Cow position: chr1:7442745-7442938 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 134, 25

Conread position: 302-501
Cow position: chr1:20002476-20002284 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 139, 89

Conread position: 302-501
Cow position: chr1:20287877-20288073 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 18, 0

Conread position: 302-501
Cow position: chr1:36874775-36874968 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 302-501
Cow position: chr1:93528450-93528653 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 303-501
Cow position: chr1:40531348-40531158 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 134, 35

Conread position: 304-457
Cow position: chr1:62996257-62996405 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 304-499
Cow position: chr1:64189264-64189450 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 89

Conread position: 304-500
Cow position: chr1:62919938-62920118 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 304-501
Cow position: chr1:24597414-24597612 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 166, 109

Conread position: 305-500
Cow position: chr1:56634859-56635049 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 9, 105

Conread position: 305-500
Cow position: chr1:100512359-100512553 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 133, 14

Conread position: 305-501
Cow position: chr1:4290919-4291115 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 9, 88

Conread position: 305-501
Cow position: chr1:68951394-68951582 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 157
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 78, 0

Conread position: 306-501
Cow position: chr1:15311632-15311824 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 153
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 137, 101

Conread position: 307-499
Cow position: chr1:98551478-98551669 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 155
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 50, 0

Conread position: 307-501
Cow position: chr1:49839271-49839460 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 157
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 13, 86

Conread position: 307-501
Cow position: chr1:55357521-55357330 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 132, 84

Conread position: 309-497
Cow position: chr1:78154958-78154773 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 128, 90

Conread position: 309-501
Cow position: chr1:6305101-6304908 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 128, 14

Conread position: 310-490
Cow position: chr1:89381046-89381218 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 311-484
Cow position: chr1:97611884-97611715 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 133, 81

Conread position: 311-491
Cow position: chr1:3429740-3429564 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 76

Conread position: 311-498
Cow position: chr1:89342224-89342043 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 72, 0

Conread position: 311-500
Cow position: chr1:43389279-43389097 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 155
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 75, 0

Conread position: 311-500
Cow position: chr1:43448055-43447877 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 12, 79

Conread position: 311-501
Cow position: chr1:10655246-10655439 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 130, 0

Conread position: 311-501
Cow position: chr1:20799641-20799840 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 63, 154

Conread position: 311-502
Cow position: chr1:78809652-78809836 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 153
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 80, 0

Conread position: 311-503
Cow position: chr1:86672460-86672270 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 133
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 180, 0

Conread position: 311-505
Cow position: chr1:31348672-31348481 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 154
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 131, 80

Conread position: 312-493
Cow position: chr1:64804338-64804155 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 130, 0

Conread position: 313-490
Cow position: chr1:55705483-55705306 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 143
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 313-501
Cow position: chr1:89076865-89076674 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 129, 41

Conread position: 314-497
Cow position: chr1:19545328-19545148 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 152
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 78, 0

Conread position: 314-501
Cow position: chr1:43358243-43358057 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 127, 77

Conread position: 315-490
Cow position: chr1:7186560-7186739 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 70, 0

Conread position: 315-496
Cow position: chr1:4293835-4294005 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 143
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 77, 0

Conread position: 315-497
Cow position: chr1:14981346-14981170 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 54, 0

Conread position: 315-501
Cow position: chr1:26200993-26201174 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 76, 0

Conread position: 316-497
Cow position: chr1:342371-342190 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 134, 88

Conread position: 316-498
Cow position: chr1:67008964-67008790 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 316-501
Cow position: chr1:15333655-15333839 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 147
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 109, 7

Conread position: 317-501
Cow position: chr1:87072479-87072650 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 318-501
Cow position: chr1:96472205-96472400 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 319-500
Cow position: chr1:71952864-71953030 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 319-501
Cow position: chr1:90976307-90976130 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 68

Conread position: 320-501
Cow position: chr1:34771726-34771550 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 144
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 88, 61

Conread position: 320-501
Cow position: chr1:49317735-49317541 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 320-501
Cow position: chr1:55194686-55194509 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 139, 63

Conread position: 321-493
Cow position: chr1:11728956-11729128 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 321-500
Cow position: chr1:98030693-98030868 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 126, 0

Conread position: 321-501
Cow position: chr1:26702429-26702252 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 110, 70

Conread position: 322-509
Cow position: chr1:98461070-98461250 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 149
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 108, 0

Conread position: 323-501
Cow position: chr1:45673492-45673664 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 114, 35

Conread position: 323-505
Cow position: chr1:53671969-53671782 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 77, 125

Conread position: 324-501
Cow position: chr1:81228558-81228387 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 116, 68

Conread position: 324-504
Cow position: chr1:49433483-49433303 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 146
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 117, 87

Conread position: 327-497
Cow position: chr1:74956239-74956070 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 140
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 113, 69

Conread position: 331-484
Cow position: chr1:3167284-3167131 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 331-497
Cow position: chr1:43872543-43872380 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 14, 0

Conread position: 333-498
Cow position: chr1:62291895-62291739 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 50, 0

Conread position: 333-498
Cow position: chr1:75382782-75382946 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 132
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 117, 0

Conread position: 333-499
Cow position: chr1:85867384-85867550 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 131

Conread position: 333-501
Cow position: chr1:68862826-68862987 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 130, 47

Conread position: 333-501
Cow position: chr1:95654925-95654759 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 133
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 138, 0

Conread position: 334-499
Cow position: chr1:100393373-100393214 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 128, 0

Conread position: 335-504
Cow position: chr1:98310854-98311026 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 96, 0

Conread position: 336-499
Cow position: chr1:98372422-98372586 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 100, 148

Conread position: 337-499
Cow position: chr1:4414413-4414254 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 160, 46

Conread position: 337-501
Cow position: chr1:32013751-32013911 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 74, 55

Conread position: 339-501
Cow position: chr1:72103643-72103804 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 102, 52

Conread position: 340-493
Cow position: chr1:63138636-63138788 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 101, 50

Conread position: 340-501
Cow position: chr1:46030555-46030401 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 108, 49

Conread position: 346-490
Cow position: chr1:24542778-24542638 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 120
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 346-508
Cow position: chr1:677281-677444 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 116
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 347-501
Cow position: chr1:43340818-43340657 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 129
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 90, 0

Conread position: 347-501
Cow position: chr1:49753735-49753883 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 347-501
Cow position: chr1:81470933-81471087 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 347-502
Cow position: chr1:89438131-89437981 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 136, 45

Conread position: 347-503
Cow position: chr1:7449937-7450087 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 95, 36

Conread position: 347-504
Cow position: chr1:51654215-51654369 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 132
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 89, 44

Conread position: 348-484
Cow position: chr1:28563763-28563629 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 94, 44

Conread position: 348-496
Cow position: chr1:82443651-82443505 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 124
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 88, 43

Conread position: 348-500
Cow position: chr1:96277249-96277100 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 126, 43

Conread position: 349-500
Cow position: chr1:24413246-24413398 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 129
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 120, 0

Conread position: 350-500
Cow position: chr1:33331281-33331134 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 122
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 101, 0

Conread position: 351-474
Cow position: chr1:83072252-83072371 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 351-501
Cow position: chr1:724543-724692 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 76, 0

Conread position: 351-501
Cow position: chr1:56674321-56674172 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 92, 53

Conread position: 351-501
Cow position: chr1:83593999-83593848 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 123
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 91, 30

Conread position: 351-503
Cow position: chr1:102113300-102113148 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 352-489
Cow position: chr1:56413710-56413572 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 352-499
Cow position: chr1:91039367-91039222 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 87, 115

Conread position: 353-493
Cow position: chr1:12464853-12464719 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 115
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 39, 0

Conread position: 353-502
Cow position: chr1:71227887-71228042 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 353-503
Cow position: chr1:70028389-70028539 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 354-492
Cow position: chr1:33207063-33206925 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 354-493
Cow position: chr1:54156929-54156785 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 27

Conread position: 354-501
Cow position: chr1:57880981-57880831 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 87, 0

Conread position: 355-501
Cow position: chr1:61742651-61742505 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 87, 46

Conread position: 356-500
Cow position: chr1:89082921-89083064 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 127
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 40, 0

Conread position: 356-501
Cow position: chr1:42398383-42398239 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 85, 35

Conread position: 358-486
Cow position: chr1:86578764-86578890 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 358-500
Cow position: chr1:99039537-99039402 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 361-501
Cow position: chr1:24445810-24445673 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 118
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 24, 0

Conread position: 362-499
Cow position: chr1:68763862-68763730 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 118
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 29, 0

Conread position: 363-504
Cow position: chr1:20667921-20667784 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 364-501
Cow position: chr1:75933094-75933227 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 366-499
Cow position: chr1:11832944-11832815 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 112, 0

Conread position: 370-498
Cow position: chr1:91875083-91874957 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 370-501
Cow position: chr1:20544119-20544249 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 372-500
Cow position: chr1:12978506-12978634 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 373-500
Cow position: chr1:87211772-87211897 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 377-501
Cow position: chr1:97696571-97696697 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 378-496
Cow position: chr1:87095399-87095280 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 380-500
Cow position: chr1:86110898-86110777 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 103
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 382-501
Cow position: chr1:77683193-77683312 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 383-484
Cow position: chr1:427082-426979 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 25, 12

Conread position: 383-499
Cow position: chr1:38753754-38753873 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 383-500
Cow position: chr1:31960061-31960179 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 383-500
Cow position: chr1:89508393-89508510 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 383-500
Cow position: chr1:100745443-100745562 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 385-482
Cow position: chr1:80311309-80311406 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 386-501
Cow position: chr1:51684643-51684756 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 56, 21

Conread position: 386-501
Cow position: chr1:85647942-85647827 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 387-493
Cow position: chr1:42175565-42175671 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 387-500
Cow position: chr1:88913158-88913272 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 389-501
Cow position: chr1:24778142-24778032 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 392-498
Cow position: chr1:31272595-31272489 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 392-503
Cow position: chr1:70026498-70026387 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 393-500
Cow position: chr1:86682716-86682608 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 393-501
Cow position: chr1:41115868-41115760 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 393-501
Cow position: chr1:43703254-43703362 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 396-498
Cow position: chr1:70312955-70312853 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 396-501
Cow position: chr1:65909376-65909482 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 94
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 396-508
Cow position: chr1:22192613-22192726 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 397-501
Cow position: chr1:30047740-30047639 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 399-500
Cow position: chr1:91023615-91023514 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 403-494
Cow position: chr1:87440325-87440414 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 80
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 405-505
Cow position: chr1:90595696-90595594 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 408-501
Cow position: chr1:85550216-85550123 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 82
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 408-501
Cow position: chr1:89729112-89729019 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 82
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.