Non-Coding RNA Search

Cow genome map


           Conread name:
           rthg25_d8.y1
        

               Conread position:
               131-501
               

               Cow position:
               chr3:53739647-53739261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 60
               

               Conread position:
               136-501
               

               Cow position:
               chr3:3984908-3985252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 74
               

               Conread position:
               136-501
               

               Cow position:
               chr3:4031543-4031895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 95
               

               Conread position:
               136-504
               

               Cow position:
               chr3:74879031-74878661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 21
               

               Conread position:
               140-500
               

               Cow position:
               chr3:59208377-59208738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 106
               

               Conread position:
               173-501
               

               Cow position:
               chr3:68708398-68708079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 22
               

               Conread position:
               246-501
               

               Cow position:
               chr3:78894642-78894400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               198
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               12, 134
               

               Conread position:
               253-499
               

               Cow position:
               chr3:48629905-48629670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               70, 155
               

               Conread position:
               253-501
               

               Cow position:
               chr3:56688-56452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 68
               

               Conread position:
               253-501
               

               Cow position:
               chr3:17957148-17957390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 85
               

               Conread position:
               254-493
               

               Cow position:
               chr3:17895536-17895763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               184
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               258-499
               

               Cow position:
               chr3:54862738-54862492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               59, 126
               

               Conread position:
               258-500
               

               Cow position:
               chr3:63179554-63179786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 128
               

               Conread position:
               258-501
               

               Cow position:
               chr3:39171798-39171558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               259-493
               

               Cow position:
               chr3:15158728-15158959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 133
               

               Conread position:
               260-497
               

               Cow position:
               chr3:13330084-13329857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               179
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               261-501
               

               Cow position:
               chr3:78946150-78945910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 89
               

               Conread position:
               262-499
               

               Cow position:
               chr3:8457346-8457577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               179
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               27, 41
               

               Conread position:
               262-501
               

               Cow position:
               chr3:5096893-5097131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 130
               

               Conread position:
               262-504
               

               Cow position:
               chr3:68881419-68881184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               263-499
               

               Cow position:
               chr3:23092297-23092055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               264-482
               

               Cow position:
               chr3:19006359-19006569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               264-501
               

               Cow position:
               chr3:58540838-58540602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 56
               

               Conread position:
               265-501
               

               Cow position:
               chr3:21081692-21081451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               142, 70
               

               Conread position:
               266-493
               

               Cow position:
               chr3:9641258-9641482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               266-501
               

               Cow position:
               chr3:58383661-58383891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 118
               

               Conread position:
               266-501
               

               Cow position:
               chr3:73759825-73759591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 81
               

               Conread position:
               268-490
               

               Cow position:
               chr3:39970176-39969954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               268-505
               

               Cow position:
               chr3:65413579-65413351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               269-499
               

               Cow position:
               chr3:56637363-56637591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               176, 0
               

               Conread position:
               270-501
               

               Cow position:
               chr3:80581369-80581589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 125
               

               Conread position:
               271-500
               

               Cow position:
               chr3:77271569-77271350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               49, 122
               

               Conread position:
               272-501
               

               Cow position:
               chr3:73467319-73467548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 87
               

               Conread position:
               274-498
               

               Cow position:
               chr3:53509983-53509763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               274-501
               

               Cow position:
               chr3:67744926-67744702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 191
               

               Conread position:
               276-501
               

               Cow position:
               chr3:27544625-27544408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               166, 115
               

               Conread position:
               278-478
               

               Cow position:
               chr3:22716575-22716379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               37, 106
               

               Conread position:
               278-493
               

               Cow position:
               chr3:83816087-83815873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               278-500
               

               Cow position:
               chr3:64281230-64281008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               278-501
               

               Cow position:
               chr3:31419408-31419627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               170, 10
               

               Conread position:
               278-501
               

               Cow position:
               chr3:64011109-64010898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               279-486
               

               Cow position:
               chr3:70895753-70895960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               279-493
               

               Cow position:
               chr3:64172152-64172361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               280-499
               

               Cow position:
               chr3:59001037-59000829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               280-500
               

               Cow position:
               chr3:11640142-11640357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               164, 111
               

               Conread position:
               280-501
               

               Cow position:
               chr3:9843292-9843510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               280-501
               

               Cow position:
               chr3:29812952-29813169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               281-497
               

               Cow position:
               chr3:8147954-8147747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               162, 42
               

               Conread position:
               281-499
               

               Cow position:
               chr3:53790835-53790614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               170
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               48, 38
               

               Conread position:
               281-499
               

               Cow position:
               chr3:58158755-58158546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               281-500
               

               Cow position:
               chr3:14263101-14263318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               161, 120
               

               Conread position:
               281-500
               

               Cow position:
               chr3:18763603-18763820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               167, 102
               

               Conread position:
               281-500
               

               Cow position:
               chr3:79148567-79148345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               169
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               159, 0
               

               Conread position:
               281-501
               

               Cow position:
               chr3:14552587-14552801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               171
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               281-501
               

               Cow position:
               chr3:26920606-26920832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               180
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               110, 49
               

               Conread position:
               281-501
               

               Cow position:
               chr3:31298451-31298228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               170
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               160, 0
               

               Conread position:
               281-501
               

               Cow position:
               chr3:48241330-48241541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               171
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               281-501
               

               Cow position:
               chr3:58951330-58951540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               155, 108
               

               Conread position:
               281-501
               

               Cow position:
               chr3:59366256-59366479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               281-501
               

               Cow position:
               chr3:59630791-59630577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               33, 111
               

               Conread position:
               281-501
               

               Cow position:
               chr3:66610129-66609918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               282-467
               

               Cow position:
               chr3:22908124-22907940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               149
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               111, 130
               

               Conread position:
               282-472
               

               Cow position:
               chr3:83988191-83988383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               156, 98
               

               Conread position:
               282-482
               

               Cow position:
               chr3:48362793-48362990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               151, 66
               

               Conread position:
               282-488
               

               Cow position:
               chr3:14717524-14717722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               155, 37
               

               Conread position:
               282-489
               

               Cow position:
               chr3:30358924-30358722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               155, 110
               

               Conread position:
               282-490
               

               Cow position:
               chr3:22676372-22676178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               282-491
               

               Cow position:
               chr3:45523974-45524181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               159, 102
               

               Conread position:
               282-491
               

               Cow position:
               chr3:48530348-48530562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               169, 15
               

               Conread position:
               282-493
               

               Cow position:
               chr3:55085474-55085260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               129, 109
               

               Conread position:
               282-493
               

               Cow position:
               chr3:62826913-62826702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               282-494
               

               Cow position:
               chr3:31056292-31056081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               159, 181
               

               Conread position:
               282-496
               

               Cow position:
               chr3:29891707-29891492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               128, 75
               

               Conread position:
               282-497
               

               Cow position:
               chr3:2036008-2036220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               155, 110
               

               Conread position:
               282-497
               

               Cow position:
               chr3:80082107-80081902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               282-498
               

               Cow position:
               chr3:16547386-16547600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               174
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               158, 110
               

               Conread position:
               282-498
               

               Cow position:
               chr3:53150037-53150250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               282-498
               

               Cow position:
               chr3:55272330-55272125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               282-498
               

               Cow position:
               chr3:70333763-70333554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               160, 38
               

               Conread position:
               282-498
               

               Cow position:
               chr3:74600827-74601033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               282-499
               

               Cow position:
               chr3:6689701-6689924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               282-499
               

               Cow position:
               chr3:27285935-27286155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 0
               

               Conread position:
               282-499
               

               Cow position:
               chr3:61191207-61191003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               282-500
               

               Cow position:
               chr3:2216070-2216289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               166
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               154, 37
               

               Conread position:
               282-500
               

               Cow position:
               chr3:2630508-2630718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               66, 103
               

               Conread position:
               282-500
               

               Cow position:
               chr3:13353070-13353285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               8, 13
               

               Conread position:
               282-500
               

               Cow position:
               chr3:23169360-23169143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 0
               

               Conread position:
               282-500
               

               Cow position:
               chr3:45534589-45534373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               282-500
               

               Cow position:
               chr3:58969182-58968976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               149, 27
               

               Conread position:
               282-500
               

               Cow position:
               chr3:72675797-72676016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               282-501
               

               Cow position:
               chr3:2483163-2483371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               156, 103
               

               Conread position:
               282-501
               

               Cow position:
               chr3:3032108-3032330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               90, 35
               

               Conread position:
               282-501
               

               Cow position:
               chr3:5101050-5100842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               282-501
               

               Cow position:
               chr3:7408193-7408413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               282-501
               

               Cow position:
               chr3:7566709-7566500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               154, 110
               

               Conread position:
               282-501
               

               Cow position:
               chr3:8716957-8717177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               157, 37
               

               Conread position:
               282-501
               

               Cow position:
               chr3:11019828-11020046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               157, 84
               

               Conread position:
               282-501
               

               Cow position:
               chr3:11254442-11254234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               30, 55
               

               Conread position:
               282-501
               

               Cow position:
               chr3:11987040-11987253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               155, 101
               

               Conread position:
               282-501
               

               Cow position:
               chr3:14626440-14626232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               160, 38
               

               Conread position:
               282-501
               

               Cow position:
               chr3:15954367-15954162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               282-501
               

               Cow position:
               chr3:16380867-16380648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               66, 56
               

               Conread position:
               282-501
               

               Cow position:
               chr3:18184778-18184999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               159, 119
               

               Conread position:
               282-501
               

               Cow position:
               chr3:20129651-20129870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               173
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               32, 112
               

               Conread position:
               282-501
               

               Cow position:
               chr3:31903398-31903189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               282-501
               

               Cow position:
               chr3:45184135-45183908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               119, 31
               

               Conread position:
               282-501
               

               Cow position:
               chr3:48852256-48852036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               159, 46
               

               Conread position:
               282-501
               

               Cow position:
               chr3:49218597-49218389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               134, 37
               

               Conread position:
               282-501
               

               Cow position:
               chr3:53112878-53113098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               282-501
               

               Cow position:
               chr3:55970217-55970431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               59, 28
               

               Conread position:
               282-501
               

               Cow position:
               chr3:57554137-57553926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               39, 90
               

               Conread position:
               282-501
               

               Cow position:
               chr3:61678401-61678619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               154, 116
               

               Conread position:
               282-501
               

               Cow position:
               chr3:61857206-61857428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               169
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               159, 0
               

               Conread position:
               282-501
               

               Cow position:
               chr3:75727879-75727659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               282-501
               

               Cow position:
               chr3:78200977-78201194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               282-501
               

               Cow position:
               chr3:79592179-79591957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 0
               

               Conread position:
               282-501
               

               Cow position:
               chr3:79884776-79884557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               155, 38
               

               Conread position:
               282-501
               

               Cow position:
               chr3:83490786-83491011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               282-502
               

               Cow position:
               chr3:31309644-31309428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               173
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               166, 15
               

               Conread position:
               282-502
               

               Cow position:
               chr3:57577409-57577622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               158, 19
               

               Conread position:
               282-503
               

               Cow position:
               chr3:33698431-33698656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               172
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               160, 0
               

               Conread position:
               282-504
               

               Cow position:
               chr3:31047232-31047023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               282-506
               

               Cow position:
               chr3:8159665-8159885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               155, 37
               

               Conread position:
               283-490
               

               Cow position:
               chr3:70566027-70565824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               164
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               283-493
               

               Cow position:
               chr3:19198392-19198591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               283-499
               

               Cow position:
               chr3:23277834-23277620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               40, 136
               

               Conread position:
               283-499
               

               Cow position:
               chr3:80071828-80072049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               170
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               100, 36
               

               Conread position:
               283-500
               

               Cow position:
               chr3:31501064-31501274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               283-500
               

               Cow position:
               chr3:55117261-55117041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               283-500
               

               Cow position:
               chr3:69962000-69961790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               283-501
               

               Cow position:
               chr3:25690499-25690717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               173
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               153, 18
               

               Conread position:
               283-501
               

               Cow position:
               chr3:28898511-28898297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               156, 36
               

               Conread position:
               283-505
               

               Cow position:
               chr3:15081028-15080817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               284-496
               

               Cow position:
               chr3:75479724-75479922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               284-497
               

               Cow position:
               chr3:18393668-18393467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               170
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               284-498
               

               Cow position:
               chr3:33253166-33252955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               152, 25
               

               Conread position:
               284-501
               

               Cow position:
               chr3:364507-364287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               284-501
               

               Cow position:
               chr3:20802917-20802699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               154, 35
               

               Conread position:
               284-501
               

               Cow position:
               chr3:22872340-22872122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 99
               

               Conread position:
               284-501
               

               Cow position:
               chr3:49140335-49140117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               98, 29
               

               Conread position:
               284-501
               

               Cow position:
               chr3:52863471-52863259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               172
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               154, 35
               

               Conread position:
               284-501
               

               Cow position:
               chr3:82460895-82461103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               33, 86
               

               Conread position:
               285-492
               

               Cow position:
               chr3:8393059-8393267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               166
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               285-504
               

               Cow position:
               chr3:70334990-70334767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               38, 64
               

               Conread position:
               286-484
               

               Cow position:
               chr3:18497739-18497929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               155, 34
               

               Conread position:
               286-488
               

               Cow position:
               chr3:65020048-65020248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               165
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 122
               

               Conread position:
               286-493
               

               Cow position:
               chr3:59611002-59610804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               286-497
               

               Cow position:
               chr3:4223029-4223234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               41, 91
               

               Conread position:
               286-497
               

               Cow position:
               chr3:30417843-30418050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               286-497
               

               Cow position:
               chr3:81401586-81401386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               286-499
               

               Cow position:
               chr3:53903900-53904102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               170
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               286-499
               

               Cow position:
               chr3:55190036-55189834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               80, 27
               

               Conread position:
               286-500
               

               Cow position:
               chr3:16004272-16004066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               169
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               286-501
               

               Cow position:
               chr3:25691463-25691679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 128
               

               Conread position:
               286-501
               

               Cow position:
               chr3:46900909-46901122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               168
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               150, 33
               

               Conread position:
               286-501
               

               Cow position:
               chr3:70401617-70401826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               170
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               286-503
               

               Cow position:
               chr3:27274254-27274456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               287-492
               

               Cow position:
               chr3:2397068-2396863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               163
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               287-501
               

               Cow position:
               chr3:84000326-84000538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 105
               

               Conread position:
               288-493
               

               Cow position:
               chr3:75711035-75711228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               288-496
               

               Cow position:
               chr3:52650816-52650611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               288-498
               

               Cow position:
               chr3:21341247-21341040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               168
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               142, 17
               

               Conread position:
               288-498
               

               Cow position:
               chr3:66292462-66292255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               165
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               129, 32
               

               Conread position:
               288-500
               

               Cow position:
               chr3:26219345-26219128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               171
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               122, 35
               

               Conread position:
               288-500
               

               Cow position:
               chr3:54782296-54782093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               169
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               30, 53
               

               Conread position:
               288-500
               

               Cow position:
               chr3:69750985-69750778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               166
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               32, 93
               

               Conread position:
               288-501
               

               Cow position:
               chr3:41367267-41367061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               167
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               288-501
               

               Cow position:
               chr3:45312770-45312974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               153, 31
               

               Conread position:
               288-501
               

               Cow position:
               chr3:46350372-46350595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               288-501
               

               Cow position:
               chr3:54434690-54434899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               288-501
               

               Cow position:
               chr3:65968871-65969086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               166
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               154, 31
               

               Conread position:
               288-501
               

               Cow position:
               chr3:67704256-67704467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               288-501
               

               Cow position:
               chr3:77227034-77227247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               288-504
               

               Cow position:
               chr3:18066850-18067063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               288-504
               

               Cow position:
               chr3:46161129-46160918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               173, 103
               

               Conread position:
               288-504
               

               Cow position:
               chr3:65236741-65236953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               148, 80
               

               Conread position:
               288-509
               

               Cow position:
               chr3:65800311-65800524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 22
               

               Conread position:
               289-497
               

               Cow position:
               chr3:77496534-77496746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 0
               

               Conread position:
               290-484
               

               Cow position:
               chr3:26903833-26904024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               156
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               152, 102
               

               Conread position:
               290-485
               

               Cow position:
               chr3:4461771-4461582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               290-490
               

               Cow position:
               chr3:36657052-36656855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               146, 102
               

               Conread position:
               290-492
               

               Cow position:
               chr3:60892351-60892539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               290-493
               

               Cow position:
               chr3:42423613-42423416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               146, 93
               

               Conread position:
               290-495
               

               Cow position:
               chr3:29887706-29887503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               290-497
               

               Cow position:
               chr3:2518819-2518611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               290-498
               

               Cow position:
               chr3:24350846-24351046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               58, 52
               

               Conread position:
               290-498
               

               Cow position:
               chr3:26894386-26894583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               290-498
               

               Cow position:
               chr3:31206590-31206797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               150, 101
               

               Conread position:
               290-499
               

               Cow position:
               chr3:18854811-18855018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 88
               

               Conread position:
               290-499
               

               Cow position:
               chr3:53588672-53588463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               180, 85
               

               Conread position:
               290-499
               

               Cow position:
               chr3:59205959-59206168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               153, 29
               

               Conread position:
               290-499
               

               Cow position:
               chr3:78782692-78782887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               38, 49
               

               Conread position:
               290-500
               

               Cow position:
               chr3:17952374-17952580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               167
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               148, 117
               

               Conread position:
               290-500
               

               Cow position:
               chr3:19789401-19789191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 183
               

               Conread position:
               290-500
               

               Cow position:
               chr3:26553990-26553790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               13, 21
               

               Conread position:
               290-500
               

               Cow position:
               chr3:50768397-50768606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               164
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               290-500
               

               Cow position:
               chr3:53270544-53270753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               162
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               151, 99
               

               Conread position:
               290-500
               

               Cow position:
               chr3:61278624-61278839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               149, 111
               

               Conread position:
               290-500
               

               Cow position:
               chr3:73443369-73443163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               166
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               290-500
               

               Cow position:
               chr3:80564681-80564887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               163
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               290-501
               

               Cow position:
               chr3:1830845-1830650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               290-501
               

               Cow position:
               chr3:2024902-2025110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               101, 118
               

               Conread position:
               290-501
               

               Cow position:
               chr3:3164778-3164570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               158, 101
               

               Conread position:
               290-501
               

               Cow position:
               chr3:12712205-12711993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               164
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               290-501
               

               Cow position:
               chr3:13899735-13899521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               165
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               290-501
               

               Cow position:
               chr3:19708381-19708179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               71, 29
               

               Conread position:
               290-501
               

               Cow position:
               chr3:23876716-23876920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               158, 99
               

               Conread position:
               290-501
               

               Cow position:
               chr3:30179800-30180006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               170
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               28, 103
               

               Conread position:
               290-501
               

               Cow position:
               chr3:36672287-36672065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               290-501
               

               Cow position:
               chr3:42452228-42452439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               31, 124
               

               Conread position:
               290-501
               

               Cow position:
               chr3:48296429-48296634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               290-501
               

               Cow position:
               chr3:49461219-49461005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               165
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               290-501
               

               Cow position:
               chr3:56704819-56704619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               169
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               290-501
               

               Cow position:
               chr3:61840007-61840201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               290-501
               

               Cow position:
               chr3:67929548-67929336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               165
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               146, 58
               

               Conread position:
               290-501
               

               Cow position:
               chr3:69849784-69849581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               205, 93
               

               Conread position:
               290-501
               

               Cow position:
               chr3:71497428-71497219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 124
               

               Conread position:
               290-501
               

               Cow position:
               chr3:79292552-79292754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               170
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               153, 101
               

               Conread position:
               290-501
               

               Cow position:
               chr3:79902221-79902431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               168
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               151, 103
               

               Conread position:
               290-504
               

               Cow position:
               chr3:42177878-42178086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               105, 30
               

               Conread position:
               290-504
               

               Cow position:
               chr3:53384565-53384359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               169
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               153, 78
               

               Conread position:
               290-509
               

               Cow position:
               chr3:20663820-20663599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               291-490
               

               Cow position:
               chr3:48370850-48371049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               291-492
               

               Cow position:
               chr3:18459801-18459605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               153, 101
               

               Conread position:
               291-493
               

               Cow position:
               chr3:26493505-26493304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               174, 28
               

               Conread position:
               291-497
               

               Cow position:
               chr3:34270650-34270836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               120, 28
               

               Conread position:
               291-498
               

               Cow position:
               chr3:54945844-54946050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               291-498
               

               Cow position:
               chr3:68583283-68583080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               162
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               146, 28
               

               Conread position:
               291-499
               

               Cow position:
               chr3:59514830-59515027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               291-500
               

               Cow position:
               chr3:59691623-59691821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               291-500
               

               Cow position:
               chr3:81277985-81277775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               291-501
               

               Cow position:
               chr3:15661982-15661775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               27, 102
               

               Conread position:
               291-501
               

               Cow position:
               chr3:43528518-43528318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               151, 100
               

               Conread position:
               291-501
               

               Cow position:
               chr3:77365575-77365373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               65, 78
               

               Conread position:
               291-501
               

               Cow position:
               chr3:83920917-83921122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 173
               

               Conread position:
               292-489
               

               Cow position:
               chr3:8557061-8556872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               292-489
               

               Cow position:
               chr3:42367769-42367585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               150, 50
               

               Conread position:
               292-501
               

               Cow position:
               chr3:82657365-82657160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               167
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               144, 99
               

               Conread position:
               294-480
               

               Cow position:
               chr3:53046935-53046753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               142, 89
               

               Conread position:
               294-484
               

               Cow position:
               chr3:5416509-5416311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               294-492
               

               Cow position:
               chr3:34392374-34392181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               161
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               91, 25
               

               Conread position:
               294-493
               

               Cow position:
               chr3:26065723-26065920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               160
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               294-497
               

               Cow position:
               chr3:75158087-75158280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               294-498
               

               Cow position:
               chr3:42483622-42483823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               154, 97
               

               Conread position:
               294-499
               

               Cow position:
               chr3:2393244-2393040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               160
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               142, 113
               

               Conread position:
               294-499
               

               Cow position:
               chr3:75570719-75570524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               143, 28
               

               Conread position:
               294-500
               

               Cow position:
               chr3:32584880-32585076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               294-500
               

               Cow position:
               chr3:61539518-61539727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               294-500
               

               Cow position:
               chr3:74233922-74234114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               294-500
               

               Cow position:
               chr3:81939973-81940180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               159
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               294-501
               

               Cow position:
               chr3:5374057-5374257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               294-501
               

               Cow position:
               chr3:8393656-8393861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               12, 101
               

               Conread position:
               294-501
               

               Cow position:
               chr3:14601991-14601787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               162
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               148, 25
               

               Conread position:
               294-501
               

               Cow position:
               chr3:42588071-42588282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               170
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               142, 112
               

               Conread position:
               294-501
               

               Cow position:
               chr3:44623175-44622960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               97, 25
               

               Conread position:
               294-501
               

               Cow position:
               chr3:49482982-49482782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               142, 26
               

               Conread position:
               294-501
               

               Cow position:
               chr3:49731915-49731716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               150, 25
               

               Conread position:
               294-501
               

               Cow position:
               chr3:53221741-53221938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               294-501
               

               Cow position:
               chr3:55124556-55124359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               294-501
               

               Cow position:
               chr3:57763945-57764152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               294-501
               

               Cow position:
               chr3:63861179-63860967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               165
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               141, 198
               

               Conread position:
               294-501
               

               Cow position:
               chr3:65058424-65058626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               165
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               143, 25
               

               Conread position:
               294-501
               

               Cow position:
               chr3:66375043-66375243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               148, 68
               

               Conread position:
               294-501
               

               Cow position:
               chr3:82056395-82056184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               142, 25
               

               Conread position:
               294-502
               

               Cow position:
               chr3:7678395-7678593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               154, 24
               

               Conread position:
               295-495
               

               Cow position:
               chr3:75057391-75057209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               296-475
               

               Cow position:
               chr3:37486059-37485879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               80, 55
               

               Conread position:
               296-475
               

               Cow position:
               chr3:61262527-61262703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               163, 93
               

               Conread position:
               296-498
               

               Cow position:
               chr3:81471376-81471173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               140, 23
               

               Conread position:
               296-500
               

               Cow position:
               chr3:49327668-49327865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               296-500
               

               Cow position:
               chr3:73764469-73764272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 33
               

               Conread position:
               296-500
               

               Cow position:
               chr3:79220573-79220778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               15, 96
               

               Conread position:
               296-501
               

               Cow position:
               chr3:2506755-2506551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 11
               

               Conread position:
               296-501
               

               Cow position:
               chr3:28908471-28908279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               296-501
               

               Cow position:
               chr3:57624187-57624389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               36, 91
               

               Conread position:
               297-493
               

               Cow position:
               chr3:61467329-61467524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               159
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               9, 173
               

               Conread position:
               297-493
               

               Cow position:
               chr3:72018843-72019034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               9, 93
               

               Conread position:
               297-496
               

               Cow position:
               chr3:57754760-57754557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               159
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               297-497
               

               Cow position:
               chr3:67544148-67543947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               76, 10
               

               Conread position:
               297-499
               

               Cow position:
               chr3:80740298-80740486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               9, 24
               

               Conread position:
               297-500
               

               Cow position:
               chr3:7331394-7331189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               297-501
               

               Cow position:
               chr3:15052212-15052027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               297-501
               

               Cow position:
               chr3:51609541-51609746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               159
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               297-501
               

               Cow position:
               chr3:54903293-54903500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               9, 24
               

               Conread position:
               297-504
               

               Cow position:
               chr3:59473836-59474047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               7, 189
               

               Conread position:
               297-504
               

               Cow position:
               chr3:71430487-71430279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               165
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               298-496
               

               Cow position:
               chr3:83442153-83441961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               189, 21
               

               Conread position:
               302-484
               

               Cow position:
               chr3:525084-525258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               302-484
               

               Cow position:
               chr3:45279187-45279377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               46, 37
               

               Conread position:
               302-494
               

               Cow position:
               chr3:10347084-10347273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               155
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               18, 91
               

               Conread position:
               302-495
               

               Cow position:
               chr3:83474479-83474662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               302-496
               

               Cow position:
               chr3:35283367-35283174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               158
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               302-496
               

               Cow position:
               chr3:53592970-53592773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               159
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               137, 25
               

               Conread position:
               302-498
               

               Cow position:
               chr3:6873515-6873322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               156
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               136, 68
               

               Conread position:
               302-500
               

               Cow position:
               chr3:12323795-12323998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               149, 61
               

               Conread position:
               302-500
               

               Cow position:
               chr3:51578591-51578397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               159
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               302-500
               

               Cow position:
               chr3:70899630-70899818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               159
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               302-501
               

               Cow position:
               chr3:2903560-2903372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               197, 81
               

               Conread position:
               302-501
               

               Cow position:
               chr3:5899556-5899748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               185, 20
               

               Conread position:
               302-501
               

               Cow position:
               chr3:13302126-13301923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               59, 103
               

               Conread position:
               302-501
               

               Cow position:
               chr3:29807192-29807390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               157
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               302-501
               

               Cow position:
               chr3:45881639-45881828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               163
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               302-501
               

               Cow position:
               chr3:79208273-79208073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               161
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               134, 174
               

               Conread position:
               303-498
               

               Cow position:
               chr3:31907418-31907219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               24, 141
               

               Conread position:
               303-500
               

               Cow position:
               chr3:6853769-6853581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               134, 16
               

               Conread position:
               304-497
               

               Cow position:
               chr3:69417056-69416862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               304-501
               

               Cow position:
               chr3:38691673-38691482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               121, 15
               

               Conread position:
               305-505
               

               Cow position:
               chr3:59701746-59701938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               133, 82
               

               Conread position:
               306-501
               

               Cow position:
               chr3:49454969-49455163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               136, 90
               

               Conread position:
               307-498
               

               Cow position:
               chr3:49230746-49230939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               109, 12
               

               Conread position:
               307-501
               

               Cow position:
               chr3:55970960-55971151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               153
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               307-502
               

               Cow position:
               chr3:60597283-60597467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               135, 61
               

               Conread position:
               307-504
               

               Cow position:
               chr3:52017491-52017696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               13, 101
               

               Conread position:
               308-500
               

               Cow position:
               chr3:50614375-50614561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               308-501
               

               Cow position:
               chr3:73590262-73590074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               309-501
               

               Cow position:
               chr3:56476419-56476603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               154
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               310-501
               

               Cow position:
               chr3:51234358-51234171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               128, 81
               

               Conread position:
               311-501
               

               Cow position:
               chr3:73394855-73395046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               155
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               313-474
               

               Cow position:
               chr3:56523760-56523605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               313-487
               

               Cow position:
               chr3:20256941-20257116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               313-493
               

               Cow position:
               chr3:14625647-14625474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               33, 74
               

               Conread position:
               313-495
               

               Cow position:
               chr3:83455411-83455231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               69, 64
               

               Conread position:
               313-501
               

               Cow position:
               chr3:16362998-16362811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               11, 96
               

               Conread position:
               313-501
               

               Cow position:
               chr3:45307675-45307858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               314-492
               

               Cow position:
               chr3:30055704-30055530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               122, 72
               

               Conread position:
               314-493
               

               Cow position:
               chr3:61143835-61144017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               113, 93
               

               Conread position:
               314-498
               

               Cow position:
               chr3:8060874-8061049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               314-498
               

               Cow position:
               chr3:11422489-11422665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               314-499
               

               Cow position:
               chr3:4087424-4087241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               122, 77
               

               Conread position:
               314-500
               

               Cow position:
               chr3:45647881-45648056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               314-500
               

               Cow position:
               chr3:71237899-71238080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               154
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               314-501
               

               Cow position:
               chr3:8604272-8604089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               314-501
               

               Cow position:
               chr3:72390822-72391010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               132, 97
               

               Conread position:
               314-504
               

               Cow position:
               chr3:28692688-28692505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               125, 68
               

               Conread position:
               315-497
               

               Cow position:
               chr3:22820312-22820489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               315-497
               

               Cow position:
               chr3:61171767-61171584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               133, 92
               

               Conread position:
               315-501
               

               Cow position:
               chr3:3556287-3556480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               62, 17
               

               Conread position:
               315-501
               

               Cow position:
               chr3:13577443-13577264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               315-501
               

               Cow position:
               chr3:44535022-44534835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               134, 7
               

               Conread position:
               315-501
               

               Cow position:
               chr3:74088431-74088245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               85, 78
               

               Conread position:
               316-493
               

               Cow position:
               chr3:23269846-23270015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               127, 65
               

               Conread position:
               316-501
               

               Cow position:
               chr3:2680255-2680442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               316-501
               

               Cow position:
               chr3:73708793-73708972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               317-497
               

               Cow position:
               chr3:48578586-48578753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               317-498
               

               Cow position:
               chr3:26970570-26970749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               318-498
               

               Cow position:
               chr3:41328201-41328370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               319-501
               

               Cow position:
               chr3:5045063-5044878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               320-501
               

               Cow position:
               chr3:61361150-61361331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               26, 44
               

               Conread position:
               322-501
               

               Cow position:
               chr3:15752878-15752710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               324-489
               

               Cow position:
               chr3:78067385-78067220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               115, 14
               

               Conread position:
               324-498
               

               Cow position:
               chr3:43233255-43233430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               324-500
               

               Cow position:
               chr3:44932260-44932436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               150
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               324-501
               

               Cow position:
               chr3:55947327-55947507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               326-490
               

               Cow position:
               chr3:55836075-55835911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               326-493
               

               Cow position:
               chr3:23445136-23444976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               113, 63
               

               Conread position:
               329-493
               

               Cow position:
               chr3:12705802-12705629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               330-484
               

               Cow position:
               chr3:77006263-77006407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               330-498
               

               Cow position:
               chr3:35074439-35074605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               332-496
               

               Cow position:
               chr3:83201768-83201604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               139
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               333-500
               

               Cow position:
               chr3:22232882-22232728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               334-493
               

               Cow position:
               chr3:4861451-4861604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               334-501
               

               Cow position:
               chr3:34937602-34937768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               335-501
               

               Cow position:
               chr3:29334751-29334586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               100, 56
               

               Conread position:
               336-485
               

               Cow position:
               chr3:79196614-79196471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               337-495
               

               Cow position:
               chr3:17447843-17447691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               338-500
               

               Cow position:
               chr3:68156496-68156658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               48, 82
               

               Conread position:
               339-499
               

               Cow position:
               chr3:55106676-55106514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               339-501
               

               Cow position:
               chr3:67930411-67930258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               9, 38
               

               Conread position:
               346-493
               

               Cow position:
               chr3:56301574-56301427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               347-483
               

               Cow position:
               chr3:74134480-74134612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               347-484
               

               Cow position:
               chr3:15506222-15506359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               347-493
               

               Cow position:
               chr3:15192339-15192485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               86, 52
               

               Conread position:
               347-500
               

               Cow position:
               chr3:26960820-26960666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               347-500
               

               Cow position:
               chr3:68146061-68145918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               95, 36
               

               Conread position:
               347-501
               

               Cow position:
               chr3:23215809-23215647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               350-484
               

               Cow position:
               chr3:11063156-11063290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               351-470
               

               Cow position:
               chr3:16656702-16656583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               351-500
               

               Cow position:
               chr3:60265457-60265317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               120, 41
               

               Conread position:
               352-501
               

               Cow position:
               chr3:15859891-15859744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               352-504
               

               Cow position:
               chr3:11711732-11711889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               353-501
               

               Cow position:
               chr3:188640-188788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               88, 45
               

               Conread position:
               354-501
               

               Cow position:
               chr3:67698061-67698203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               355-501
               

               Cow position:
               chr3:23265512-23265369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               85, 38
               

               Conread position:
               355-501
               

               Cow position:
               chr3:25944860-25945009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               355-501
               

               Cow position:
               chr3:83845687-83845825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               355-508
               

               Cow position:
               chr3:46006248-46006094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               356-493
               

               Cow position:
               chr3:23105582-23105449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               356-493
               

               Cow position:
               chr3:70631794-70631933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               8, 97
               

               Conread position:
               356-501
               

               Cow position:
               chr3:35005561-35005703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               357-487
               

               Cow position:
               chr3:5082857-5082727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               357-501
               

               Cow position:
               chr3:76713537-76713399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               86, 37
               

               Conread position:
               358-497
               

               Cow position:
               chr3:25059859-25059999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               358-501
               

               Cow position:
               chr3:39328186-39328320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               84, 33
               

               Conread position:
               364-499
               

               Cow position:
               chr3:21693733-21693871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               367-501
               

               Cow position:
               chr3:55712220-55712356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               368-501
               

               Cow position:
               chr3:3637978-3638112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               368-501
               

               Cow position:
               chr3:7940760-7940631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               370-501
               

               Cow position:
               chr3:27697185-27697052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               371-472
               

               Cow position:
               chr3:14801035-14800934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               85
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               371-501
               

               Cow position:
               chr3:74502526-74502395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               22, 11
               

               Conread position:
               373-501
               

               Cow position:
               chr3:38828563-38828693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               378-507
               

               Cow position:
               chr3:77665974-77665848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               383-500
               

               Cow position:
               chr3:74079832-74079715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               383-501
               

               Cow position:
               chr3:57273873-57273990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               383-501
               

               Cow position:
               chr3:66884134-66884015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               386-501
               

               Cow position:
               chr3:63269035-63269147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               387-501
               

               Cow position:
               chr3:27212173-27212286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               390-501
               

               Cow position:
               chr3:59271355-59271465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               392-500
               

               Cow position:
               chr3:20678019-20677911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               392-504
               

               Cow position:
               chr3:75687623-75687510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               396-501
               

               Cow position:
               chr3:16891118-16891223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               41, 62
               

               Conread position:
               396-504
               

               Cow position:
               chr3:34669908-34669799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               396-506
               

               Cow position:
               chr3:26981884-26981996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               397-500
               

               Cow position:
               chr3:70762302-70762199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               91
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               397-500
               

               Cow position:
               chr3:76922842-76922739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               89
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               397-501
               

               Cow position:
               chr3:59597006-59597108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               91
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               397-501
               

               Cow position:
               chr3:78739676-78739780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               13, 54
               

               Conread position:
               398-500
               

               Cow position:
               chr3:36418644-36418543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               399-484
               

               Cow position:
               chr3:54506532-54506617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               86
               

               Alignm identity:
               76
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               399-504
               

               Cow position:
               chr3:62046485-62046588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               400-500
               

               Cow position:
               chr3:19792716-19792817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               401-497
               

               Cow position:
               chr3:55819572-55819671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               84
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               417-504
               

               Cow position:
               chr3:18056284-18056371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               88
               

               Alignm identity:
               77
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.
Conread position:	131-501
Cow position:	chr3:53739647-53739261 (view UCSC Genome Browser custom track)
Alignm length:	390
Alignm identity:	272
Alignm E-value:	0
Alignm gaps (pig, cow):	47, 60
Conread position:	136-501
Cow position:	chr3:3984908-3985252 (view UCSC Genome Browser custom track)
Alignm length:	367
Alignm identity:	263
Alignm E-value:	0
Alignm gaps (pig, cow):	42, 74
Conread position:	136-504
Cow position:	chr3:74879031-74878661 (view UCSC Genome Browser custom track)
Alignm length:	387
Alignm identity:	285
Alignm E-value:	0
Alignm gaps (pig, cow):	41, 21
Conread position:	140-500
Cow position:	chr3:59208377-59208738 (view UCSC Genome Browser custom track)
Alignm length:	369
Alignm identity:	258
Alignm E-value:	0
Alignm gaps (pig, cow):	38, 106
Conread position:	173-501
Cow position:	chr3:68708398-68708079 (view UCSC Genome Browser custom track)
Alignm length:	330
Alignm identity:	238
Alignm E-value:	0
Alignm gaps (pig, cow):	16, 22
Conread position:	246-501
Cow position:	chr3:78894642-78894400 (view UCSC Genome Browser custom track)
Alignm length:	258
Alignm identity:	198
Alignm E-value:	5.04467e-44
Alignm gaps (pig, cow):	12, 134
Conread position:	253-499
Cow position:	chr3:48629905-48629670 (view UCSC Genome Browser custom track)
Alignm length:	249
Alignm identity:	172
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	70, 155
Conread position:	253-501
Cow position:	chr3:56688-56452 (view UCSC Genome Browser custom track)
Alignm length:	250
Alignm identity:	198
Alignm E-value:	0
Alignm gaps (pig, cow):	121, 68
Conread position:	254-493
Cow position:	chr3:17895536-17895763 (view UCSC Genome Browser custom track)
Alignm length:	240
Alignm identity:	184
Alignm E-value:	5.04467e-44
Alignm gaps (pig, cow):	114, 0
Conread position:	258-499
Cow position:	chr3:54862738-54862492 (view UCSC Genome Browser custom track)
Alignm length:	248
Alignm identity:	181
Alignm E-value:	3e-39
Alignm gaps (pig, cow):	59, 126
Conread position:	258-500
Cow position:	chr3:63179554-63179786 (view UCSC Genome Browser custom track)
Alignm length:	245
Alignm identity:	198
Alignm E-value:	0
Alignm gaps (pig, cow):	183, 128
Conread position:	258-501
Cow position:	chr3:39171798-39171558 (view UCSC Genome Browser custom track)
Alignm length:	244
Alignm identity:	199
Alignm E-value:	0
Alignm gaps (pig, cow):	133, 0
Conread position:	259-493
Cow position:	chr3:15158728-15158959 (view UCSC Genome Browser custom track)
Alignm length:	236
Alignm identity:	188
Alignm E-value:	0
Alignm gaps (pig, cow):	212, 133
Conread position:	260-497
Cow position:	chr3:13330084-13329857 (view UCSC Genome Browser custom track)
Alignm length:	238
Alignm identity:	179
Alignm E-value:	4.00001e-41
Alignm gaps (pig, cow):	60, 0
Conread position:	261-501
Cow position:	chr3:78946150-78945910 (view UCSC Genome Browser custom track)
Alignm length:	244
Alignm identity:	198
Alignm E-value:	0
Alignm gaps (pig, cow):	65, 89
Conread position:	262-499
Cow position:	chr3:8457346-8457577 (view UCSC Genome Browser custom track)
Alignm length:	239
Alignm identity:	179
Alignm E-value:	9.99995e-41
Alignm gaps (pig, cow):	27, 41
Conread position:	262-501
Cow position:	chr3:5096893-5097131 (view UCSC Genome Browser custom track)
Alignm length:	244
Alignm identity:	203
Alignm E-value:	0
Alignm gaps (pig, cow):	56, 130
Conread position:	262-504
Cow position:	chr3:68881419-68881184 (view UCSC Genome Browser custom track)
Alignm length:	243
Alignm identity:	186
Alignm E-value:	0
Alignm gaps (pig, cow):	58, 0
Conread position:	263-499
Cow position:	chr3:23092297-23092055 (view UCSC Genome Browser custom track)
Alignm length:	243
Alignm identity:	171
Alignm E-value:	2e-33
Alignm gaps (pig, cow):	53, 0
Conread position:	264-482
Cow position:	chr3:19006359-19006569 (view UCSC Genome Browser custom track)
Alignm length:	219
Alignm identity:	173
Alignm E-value:	0
Alignm gaps (pig, cow):	132, 0