Cow genome map

Conread name: rthg25_d8.y1

Conread position: 136-498
Cow position: chrX:46984900-46984525 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 292

Conread position: 136-501
Cow position: chrX:41167353-41166989 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 186

Conread position: 136-502
Cow position: chrX:9417076-9416717 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 117

Conread position: 139-501
Cow position: chrX:9635572-9635210 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 118

Conread position: 171-499
Cow position: chrX:24132500-24132177 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 17

Conread position: 250-499
Cow position: chrX:44961475-44961722 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 158

Conread position: 252-478
Cow position: chrX:30421208-30420977 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 122, 33

Conread position: 253-501
Cow position: chrX:16416239-16416483 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 77

Conread position: 253-501
Cow position: chrX:35284348-35284595 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 192
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 60, 142

Conread position: 256-500
Cow position: chrX:21004418-21004655 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 258-502
Cow position: chrX:17631066-17630831 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 64, 0

Conread position: 258-504
Cow position: chrX:11455316-11455069 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 193
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 180, 61

Conread position: 260-484
Cow position: chrX:34543525-34543746 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 97

Conread position: 260-495
Cow position: chrX:7513254-7513481 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 260-501
Cow position: chrX:23514280-23514040 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 79

Conread position: 260-501
Cow position: chrX:38549186-38549422 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 0

Conread position: 261-499
Cow position: chrX:29032156-29032383 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 187, 59

Conread position: 264-484
Cow position: chrX:9855042-9855263 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 0

Conread position: 264-484
Cow position: chrX:9953883-9954104 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 0

Conread position: 264-491
Cow position: chrX:2206802-2206585 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 127

Conread position: 264-501
Cow position: chrX:36975692-36975925 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 25

Conread position: 264-501
Cow position: chrX:41884676-41884439 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 264-501
Cow position: chrX:42282174-42282403 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 176
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 42, 30

Conread position: 265-501
Cow position: chrX:28878420-28878194 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 119

Conread position: 265-503
Cow position: chrX:37119342-37119571 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 139, 103

Conread position: 266-478
Cow position: chrX:6639868-6640082 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 173
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 54, 126

Conread position: 266-501
Cow position: chrX:21672295-21672531 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 0

Conread position: 266-501
Cow position: chrX:39558605-39558375 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 128

Conread position: 269-481
Cow position: chrX:42499282-42499073 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 167
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 147, 126

Conread position: 269-498
Cow position: chrX:39126089-39126304 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 28, 0

Conread position: 269-501
Cow position: chrX:41403722-41403954 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 172, 32

Conread position: 269-501
Cow position: chrX:41410270-41410502 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 172, 32

Conread position: 269-501
Cow position: chrX:47757182-47756953 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 173
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 167, 123

Conread position: 270-494
Cow position: chrX:47249040-47248816 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 172
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 50, 155

Conread position: 270-499
Cow position: chrX:7508887-7509115 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 270-501
Cow position: chrX:4044102-4043885 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 183
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 50, 0

Conread position: 270-501
Cow position: chrX:17662849-17662618 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 272-500
Cow position: chrX:26876131-26875909 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 272-502
Cow position: chrX:34663089-34662871 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 169, 29

Conread position: 274-490
Cow position: chrX:619256-619040 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 274-500
Cow position: chrX:33855481-33855259 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 274-501
Cow position: chrX:27394262-27394047 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 179
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 118, 0

Conread position: 276-500
Cow position: chrX:24424633-24424414 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 18, 0

Conread position: 278-498
Cow position: chrX:12249561-12249774 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 87

Conread position: 278-499
Cow position: chrX:33493531-33493750 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 278-501
Cow position: chrX:25411596-25411816 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 176
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 107, 41

Conread position: 279-504
Cow position: chrX:43049099-43049327 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 280-484
Cow position: chrX:11939166-11938969 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 160
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 49, 0

Conread position: 280-490
Cow position: chrX:14884204-14883994 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 280-500
Cow position: chrX:13382082-13382304 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 40, 0

Conread position: 281-499
Cow position: chrX:35388148-35387929 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 281-500
Cow position: chrX:35224061-35224270 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 169
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 138, 38

Conread position: 281-501
Cow position: chrX:40826988-40826776 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 143, 82

Conread position: 281-501
Cow position: chrX:44835057-44834835 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 125, 115

Conread position: 282-470
Cow position: chrX:48370856-48371044 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 53, 128

Conread position: 282-476
Cow position: chrX:35268650-35268832 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 67, 0

Conread position: 282-478
Cow position: chrX:23061214-23061398 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 282-484
Cow position: chrX:678808-678608 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 0

Conread position: 282-485
Cow position: chrX:11581694-11581904 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 88, 135

Conread position: 282-485
Cow position: chrX:22482929-22482727 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 282-488
Cow position: chrX:11806257-11806051 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 161
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 282-488
Cow position: chrX:19015202-19015400 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 282-490
Cow position: chrX:4123595-4123802 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 156, 107

Conread position: 282-491
Cow position: chrX:20582790-20582987 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 168
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 125, 110

Conread position: 282-493
Cow position: chrX:46771212-46770992 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 36, 116

Conread position: 282-497
Cow position: chrX:35041979-35042196 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 143, 0

Conread position: 282-497
Cow position: chrX:46032958-46032749 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 160, 31

Conread position: 282-498
Cow position: chrX:161188-161385 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 129, 52

Conread position: 282-498
Cow position: chrX:8899784-8900002 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 153, 0

Conread position: 282-498
Cow position: chrX:17497856-17498057 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 168
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 107, 0

Conread position: 282-498
Cow position: chrX:20340131-20339917 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 94, 0

Conread position: 282-499
Cow position: chrX:151661-151878 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 160, 83

Conread position: 282-499
Cow position: chrX:1616291-1616071 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 282-499
Cow position: chrX:6544016-6544228 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 282-499
Cow position: chrX:7718613-7718827 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 145

Conread position: 282-499
Cow position: chrX:9161348-9161558 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 158, 37

Conread position: 282-499
Cow position: chrX:15485868-15485651 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 171
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 51, 110

Conread position: 282-499
Cow position: chrX:17541724-17541931 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 37, 0

Conread position: 282-499
Cow position: chrX:30162757-30162970 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 182, 37

Conread position: 282-499
Cow position: chrX:35273104-35273328 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 177
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 29, 189

Conread position: 282-499
Cow position: chrX:38967410-38967621 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 170
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 155, 109

Conread position: 282-499
Cow position: chrX:40183590-40183370 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 156, 0

Conread position: 282-500
Cow position: chrX:3653523-3653733 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 108, 0

Conread position: 282-500
Cow position: chrX:7571666-7571877 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 168
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 110, 0

Conread position: 282-500
Cow position: chrX:16289802-16289583 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 159, 0

Conread position: 282-500
Cow position: chrX:25035627-25035405 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 165, 37

Conread position: 282-500
Cow position: chrX:34401757-34401972 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 102

Conread position: 282-500
Cow position: chrX:38007008-38006790 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 282-500
Cow position: chrX:38963869-38964079 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 175
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 186, 38

Conread position: 282-500
Cow position: chrX:43527263-43527484 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 176
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 154, 109

Conread position: 282-500
Cow position: chrX:46722981-46722760 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 159, 0

Conread position: 282-500
Cow position: chrX:47344054-47344268 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 172
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 159, 136

Conread position: 282-501
Cow position: chrX:5872073-5872294 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 161, 208

Conread position: 282-501
Cow position: chrX:8730839-8731062 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 127, 0

Conread position: 282-501
Cow position: chrX:12018035-12018267 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 143, 91

Conread position: 282-501
Cow position: chrX:15147426-15147212 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 173
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 154, 37

Conread position: 282-501
Cow position: chrX:15545657-15545867 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 160, 38

Conread position: 282-501
Cow position: chrX:19188696-19188913 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 160, 126

Conread position: 282-501
Cow position: chrX:21593043-21593263 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 0

Conread position: 282-501
Cow position: chrX:25816136-25815933 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 101, 0

Conread position: 282-501
Cow position: chrX:26441020-26440803 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 125

Conread position: 282-501
Cow position: chrX:27442795-27442580 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 155, 61

Conread position: 282-501
Cow position: chrX:27516292-27516504 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 155, 110

Conread position: 282-501
Cow position: chrX:28105682-28105895 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 282-501
Cow position: chrX:28847119-28846906 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 166, 110

Conread position: 282-501
Cow position: chrX:30133564-30133345 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 133, 68

Conread position: 282-501
Cow position: chrX:32020362-32020144 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 174
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 159, 109

Conread position: 282-501
Cow position: chrX:35609746-35609964 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 109

Conread position: 282-501
Cow position: chrX:36778166-36778386 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 215

Conread position: 282-501
Cow position: chrX:39938757-39938548 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 175
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 160, 28

Conread position: 282-501
Cow position: chrX:40269236-40269463 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 282-501
Cow position: chrX:40452453-40452234 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 282-501
Cow position: chrX:45404074-45403852 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 159, 0

Conread position: 282-503
Cow position: chrX:13868454-13868680 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 156, 37

Conread position: 282-503
Cow position: chrX:33020246-33020461 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 37, 0

Conread position: 283-500
Cow position: chrX:10428300-10428518 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 154, 0

Conread position: 283-500
Cow position: chrX:28866231-28866031 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 28, 0

Conread position: 283-501
Cow position: chrX:5638408-5638193 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 36

Conread position: 283-501
Cow position: chrX:42994375-42994588 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 78

Conread position: 283-501
Cow position: chrX:44737230-44737010 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 102, 25

Conread position: 283-501
Cow position: chrX:45598843-45598626 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 147, 137

Conread position: 283-504
Cow position: chrX:27432158-27431936 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 283-504
Cow position: chrX:38218476-38218686 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 172
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 36, 0

Conread position: 284-493
Cow position: chrX:20697846-20697637 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 164
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 93, 109

Conread position: 284-497
Cow position: chrX:37843482-37843692 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 157, 107

Conread position: 284-499
Cow position: chrX:25713563-25713767 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 10, 0

Conread position: 284-501
Cow position: chrX:40647740-40647961 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 35

Conread position: 285-500
Cow position: chrX:45501911-45502119 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 173, 0

Conread position: 285-501
Cow position: chrX:7646021-7646228 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 170
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 36, 100

Conread position: 285-501
Cow position: chrX:46532746-46532526 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 151, 34

Conread position: 286-493
Cow position: chrX:20801545-20801742 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 286-495
Cow position: chrX:34532295-34532490 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 23, 0

Conread position: 286-498
Cow position: chrX:18695157-18694952 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 169
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 34, 107

Conread position: 286-499
Cow position: chrX:917605-917392 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 105, 33

Conread position: 286-501
Cow position: chrX:14973968-14973765 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 69, 23

Conread position: 286-501
Cow position: chrX:27680167-27680370 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 169
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 34, 0

Conread position: 286-501
Cow position: chrX:42461980-42461769 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 288-484
Cow position: chrX:43218161-43218365 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 92, 200

Conread position: 288-493
Cow position: chrX:2467645-2467853 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 288-495
Cow position: chrX:31436246-31436447 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 167
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 32, 103

Conread position: 288-498
Cow position: chrX:6690482-6690284 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 167
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 155, 101

Conread position: 288-499
Cow position: chrX:25337945-25338158 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 165
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 163, 0

Conread position: 288-499
Cow position: chrX:38094759-38094548 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 31

Conread position: 288-500
Cow position: chrX:9252412-9252188 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 177
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 159, 83

Conread position: 288-501
Cow position: chrX:10412220-10412011 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 288-501
Cow position: chrX:15814863-15815060 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 86, 0

Conread position: 288-501
Cow position: chrX:33639737-33639948 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 150, 103

Conread position: 288-501
Cow position: chrX:38439239-38439453 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 288-501
Cow position: chrX:41879165-41878957 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 97, 35

Conread position: 288-501
Cow position: chrX:47873575-47873361 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 153, 60

Conread position: 288-501
Cow position: chrX:48236578-48236794 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 166
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 84, 11

Conread position: 289-443
Cow position: chrX:29049737-29049881 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 289-480
Cow position: chrX:45430250-45430062 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 127, 112

Conread position: 289-500
Cow position: chrX:9201314-9201524 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 31, 0

Conread position: 289-501
Cow position: chrX:17231501-17231708 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 148, 118

Conread position: 289-504
Cow position: chrX:20151617-20151828 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 154, 94

Conread position: 290-488
Cow position: chrX:42339168-42338980 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 163
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 101, 0

Conread position: 290-490
Cow position: chrX:44731362-44731562 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 290-497
Cow position: chrX:12309621-12309414 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 165
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 50, 29

Conread position: 290-497
Cow position: chrX:48010362-48010573 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 148, 0

Conread position: 290-498
Cow position: chrX:38072003-38071792 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 108, 0

Conread position: 290-499
Cow position: chrX:19930424-19930624 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 163
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 30, 0

Conread position: 290-499
Cow position: chrX:27509252-27509050 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 102, 0

Conread position: 290-500
Cow position: chrX:1946953-1946737 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 145
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 290-500
Cow position: chrX:6278738-6278526 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 290-500
Cow position: chrX:11655854-11656066 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 290-500
Cow position: chrX:37232177-37232387 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 290-500
Cow position: chrX:40557908-40557707 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 290-501
Cow position: chrX:878603-878408 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 290-501
Cow position: chrX:4269300-4269086 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 41, 102

Conread position: 290-501
Cow position: chrX:8925471-8925676 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 164
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 24, 101

Conread position: 290-501
Cow position: chrX:9997565-9997360 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 168
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 29, 0

Conread position: 290-501
Cow position: chrX:23497895-23497693 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 290-501
Cow position: chrX:23564029-23563815 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 290-501
Cow position: chrX:30963104-30962898 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 153, 102

Conread position: 290-501
Cow position: chrX:34441682-34441476 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 169
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 147, 29

Conread position: 290-501
Cow position: chrX:40481103-40480893 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 161, 23

Conread position: 290-501
Cow position: chrX:41198872-41199080 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 148, 102

Conread position: 290-501
Cow position: chrX:42874746-42874959 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 29

Conread position: 290-501
Cow position: chrX:44054569-44054782 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 126, 101

Conread position: 290-501
Cow position: chrX:47967367-47967576 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 151, 106

Conread position: 290-504
Cow position: chrX:3654372-3654586 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 290-504
Cow position: chrX:7351067-7351279 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 61

Conread position: 290-504
Cow position: chrX:8797016-8797231 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 32

Conread position: 290-505
Cow position: chrX:7695529-7695722 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 152, 30

Conread position: 290-508
Cow position: chrX:48287672-48287467 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 110, 29

Conread position: 291-479
Cow position: chrX:12980060-12979874 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 155
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 291-484
Cow position: chrX:41122841-41123026 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 148, 28

Conread position: 291-490
Cow position: chrX:13648015-13647821 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 158
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 87, 0

Conread position: 291-499
Cow position: chrX:2648581-2648380 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 291-501
Cow position: chrX:5017639-5017439 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 92, 0

Conread position: 291-501
Cow position: chrX:5900226-5900444 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 108, 0

Conread position: 291-501
Cow position: chrX:42171530-42171321 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 291-501
Cow position: chrX:45412886-45412684 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 125, 101

Conread position: 291-509
Cow position: chrX:27705362-27705572 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 144, 36

Conread position: 294-484
Cow position: chrX:17794757-17794941 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 153
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 98, 0

Conread position: 294-498
Cow position: chrX:17725750-17725946 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 165
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 0

Conread position: 294-498
Cow position: chrX:42381328-42381130 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 109

Conread position: 294-499
Cow position: chrX:25232362-25232564 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 174, 99

Conread position: 294-499
Cow position: chrX:40788976-40789182 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 134, 150

Conread position: 294-499
Cow position: chrX:47481571-47481775 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 111, 98

Conread position: 294-500
Cow position: chrX:31250164-31250361 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 29, 0

Conread position: 294-500
Cow position: chrX:35542663-35542869 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 294-500
Cow position: chrX:42247412-42247212 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 164
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 113, 0

Conread position: 294-501
Cow position: chrX:12115810-12116021 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 19, 90

Conread position: 294-501
Cow position: chrX:14924772-14924976 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 166
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 144, 48

Conread position: 294-501
Cow position: chrX:19019338-19019131 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 167
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 26, 7

Conread position: 294-501
Cow position: chrX:30921957-30922161 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 147, 57

Conread position: 294-501
Cow position: chrX:31294770-31294588 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 158
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 294-501
Cow position: chrX:34502692-34502897 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 294-501
Cow position: chrX:37048809-37048602 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 161
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 30, 96

Conread position: 294-502
Cow position: chrX:13265848-13265649 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 165
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 98, 0

Conread position: 294-503
Cow position: chrX:42588899-42588691 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 155, 97

Conread position: 295-462
Cow position: chrX:48536892-48536726 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 295-498
Cow position: chrX:48684450-48684253 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 161
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 57, 50

Conread position: 295-501
Cow position: chrX:11856202-11856403 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 40

Conread position: 295-501
Cow position: chrX:35681118-35681316 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 165
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 26, 74

Conread position: 295-501
Cow position: chrX:47191626-47191436 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 296-476
Cow position: chrX:37072180-37072358 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 23, 0

Conread position: 296-480
Cow position: chrX:22074574-22074754 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 151
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 95, 0

Conread position: 296-493
Cow position: chrX:40116199-40116388 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 155
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 28, 0

Conread position: 296-497
Cow position: chrX:21665819-21665621 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 164
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 146, 23

Conread position: 296-500
Cow position: chrX:48195267-48195062 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 145, 102

Conread position: 296-501
Cow position: chrX:28097899-28098087 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 161
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 23, 0

Conread position: 296-501
Cow position: chrX:41743687-41743887 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 23

Conread position: 297-501
Cow position: chrX:29509669-29509466 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 95

Conread position: 297-501
Cow position: chrX:30543512-30543313 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 9, 23

Conread position: 297-501
Cow position: chrX:34554500-34554701 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 9, 92

Conread position: 297-501
Cow position: chrX:45089218-45089424 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 144, 47

Conread position: 297-504
Cow position: chrX:15139770-15139567 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 162
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 20, 34

Conread position: 299-501
Cow position: chrX:11633455-11633655 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 139, 92

Conread position: 302-491
Cow position: chrX:7806157-7806345 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 18, 47

Conread position: 302-496
Cow position: chrX:11589812-11589617 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 156
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 31, 20

Conread position: 302-500
Cow position: chrX:10959623-10959423 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 302-501
Cow position: chrX:1503119-1503311 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 17, 0

Conread position: 302-501
Cow position: chrX:7721764-7721964 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 302-501
Cow position: chrX:11718000-11717813 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 156
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 18, 0

Conread position: 302-501
Cow position: chrX:24366052-24365850 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 94, 28

Conread position: 302-501
Cow position: chrX:29602053-29601855 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 28

Conread position: 302-501
Cow position: chrX:36283125-36283327 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 145, 0

Conread position: 302-501
Cow position: chrX:44396795-44396993 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 67, 11

Conread position: 302-501
Cow position: chrX:46073042-46072845 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 18, 112

Conread position: 302-504
Cow position: chrX:16541896-16541693 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 139, 18

Conread position: 303-499
Cow position: chrX:20792037-20791845 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 148, 88

Conread position: 303-500
Cow position: chrX:6413827-6414022 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 131, 58

Conread position: 303-500
Cow position: chrX:13785586-13785389 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 50, 29

Conread position: 303-500
Cow position: chrX:21642697-21642504 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 16, 0

Conread position: 305-493
Cow position: chrX:37910235-37910411 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 78, 0

Conread position: 305-501
Cow position: chrX:14599312-14599508 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 154
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 306-498
Cow position: chrX:9425958-9425768 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 155
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 142, 105

Conread position: 306-501
Cow position: chrX:40567383-40567577 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 136, 170

Conread position: 306-501
Cow position: chrX:45015369-45015554 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 69

Conread position: 310-487
Cow position: chrX:16324176-16324003 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 132, 82

Conread position: 310-493
Cow position: chrX:43730427-43730251 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 98, 0

Conread position: 310-500
Cow position: chrX:8869621-8869430 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 57, 134

Conread position: 311-493
Cow position: chrX:29542430-29542252 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 147
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 72, 0

Conread position: 311-497
Cow position: chrX:45993001-45993194 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 28, 148

Conread position: 311-501
Cow position: chrX:3579735-3579920 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 129, 12

Conread position: 311-501
Cow position: chrX:27174783-27174972 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 152
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 13, 81

Conread position: 311-501
Cow position: chrX:33466402-33466585 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 74, 0

Conread position: 312-495
Cow position: chrX:46430068-46429889 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 80, 0

Conread position: 312-508
Cow position: chrX:45658283-45658097 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 47, 82

Conread position: 313-500
Cow position: chrX:28836110-28835931 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 313-500
Cow position: chrX:40035655-40035469 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 157
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 100

Conread position: 313-500
Cow position: chrX:45845886-45846073 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 313-500
Cow position: chrX:47453917-47454104 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 104, 123

Conread position: 313-501
Cow position: chrX:6234658-6234477 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 149
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 129, 76

Conread position: 314-497
Cow position: chrX:7497035-7497211 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 77, 0

Conread position: 314-499
Cow position: chrX:38852988-38853170 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 146
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 81, 0

Conread position: 314-500
Cow position: chrX:34411631-34411816 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 158
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 113

Conread position: 314-501
Cow position: chrX:45110447-45110631 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 110, 0

Conread position: 315-498
Cow position: chrX:32420011-32420192 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 101, 76

Conread position: 315-499
Cow position: chrX:10831704-10831520 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 145
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 315-501
Cow position: chrX:46315588-46315402 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 153
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 316-504
Cow position: chrX:46587611-46587798 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 132, 79

Conread position: 319-501
Cow position: chrX:17908487-17908313 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 64, 0

Conread position: 321-501
Cow position: chrX:1499468-1499640 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 121, 62

Conread position: 322-501
Cow position: chrX:43780053-43779871 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 63, 0

Conread position: 323-496
Cow position: chrX:30833045-30832879 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 140
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 84, 0

Conread position: 323-501
Cow position: chrX:4091448-4091623 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 122, 68

Conread position: 323-507
Cow position: chrX:41764439-41764627 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 49

Conread position: 324-501
Cow position: chrX:18999690-18999864 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 113, 59

Conread position: 324-501
Cow position: chrX:47301102-47300928 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 114, 67

Conread position: 325-501
Cow position: chrX:33000706-33000878 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 95, 0

Conread position: 325-501
Cow position: chrX:36961438-36961618 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 143
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 111, 0

Conread position: 325-501
Cow position: chrX:37781315-37781136 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 86, 0

Conread position: 325-501
Cow position: chrX:40809489-40809664 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 116, 68

Conread position: 327-501
Cow position: chrX:47484467-47484290 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 109, 0

Conread position: 329-500
Cow position: chrX:31311832-31312001 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 138
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 151, 0

Conread position: 329-501
Cow position: chrX:45874805-45874974 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 107, 57

Conread position: 330-501
Cow position: chrX:37540932-37541099 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 111, 66

Conread position: 332-497
Cow position: chrX:44657155-44656990 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 119
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 104, 79

Conread position: 332-498
Cow position: chrX:23785463-23785635 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 104, 0

Conread position: 333-503
Cow position: chrX:1505523-1505686 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 108, 24

Conread position: 333-503
Cow position: chrX:24149450-24149618 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 52, 0

Conread position: 334-501
Cow position: chrX:42235722-42235553 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 42, 59

Conread position: 336-499
Cow position: chrX:31256681-31256839 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 336-499
Cow position: chrX:48035241-48035400 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 104, 0

Conread position: 338-498
Cow position: chrX:36067835-36067985 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 346-493
Cow position: chrX:27145446-27145590 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 126
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 5, 47

Conread position: 347-490
Cow position: chrX:48044375-48044231 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 105
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 347-501
Cow position: chrX:36060976-36061133 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 94, 0

Conread position: 349-497
Cow position: chrX:8917220-8917368 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 88, 8

Conread position: 351-495
Cow position: chrX:10252354-10252212 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 351-498
Cow position: chrX:34792482-34792336 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 61, 0

Conread position: 351-501
Cow position: chrX:22387419-22387267 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 26, 0

Conread position: 351-501
Cow position: chrX:32820857-32821005 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 127
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 85, 41

Conread position: 351-501
Cow position: chrX:46433311-46433467 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 352-498
Cow position: chrX:25208017-25207869 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 353-484
Cow position: chrX:41271377-41271249 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 83, 38

Conread position: 353-501
Cow position: chrX:35885899-35885752 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 88, 30

Conread position: 354-500
Cow position: chrX:9770853-9770702 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 354-501
Cow position: chrX:14003813-14003666 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 122
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 355-490
Cow position: chrX:45759230-45759356 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 355-493
Cow position: chrX:24288100-24287958 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 92

Conread position: 364-501
Cow position: chrX:36355957-36356088 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 365-500
Cow position: chrX:31252257-31252392 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 117
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 365-501
Cow position: chrX:27227966-27228103 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 117
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 77, 24

Conread position: 368-501
Cow position: chrX:29680413-29680285 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 114
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 5, 0

Conread position: 370-493
Cow position: chrX:48385516-48385390 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 370-500
Cow position: chrX:20584166-20584298 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 111
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 373-499
Cow position: chrX:21986446-21986319 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 374-492
Cow position: chrX:5118654-5118536 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 374-501
Cow position: chrX:12405539-12405408 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 378-501
Cow position: chrX:35969232-35969110 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 11

Conread position: 378-503
Cow position: chrX:10366374-10366249 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 379-501
Cow position: chrX:616409-616287 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 109
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 379-501
Cow position: chrX:9365822-9365700 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 8, 21

Conread position: 383-501
Cow position: chrX:11614556-11614675 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 385-501
Cow position: chrX:27685106-27685223 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 387-501
Cow position: chrX:29723602-29723717 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 389-501
Cow position: chrX:41027020-41027131 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 392-498
Cow position: chrX:11085191-11085084 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 396-500
Cow position: chrX:19273853-19273748 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 93
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 396-500
Cow position: chrX:40685461-40685357 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 396-501
Cow position: chrX:37955703-37955806 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 397-501
Cow position: chrX:38728608-38728713 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 400-504
Cow position: chrX:19003174-19003278 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 402-501
Cow position: chrX:27946183-27946081 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 406-500
Cow position: chrX:26881688-26881594 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 79
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.