Cow genome map

Conread name: rthg33_p11.y1

Conread position: 265-489
Cow position: chr10:21489340-21489572 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 60, 21

Conread position: 265-520
Cow position: chr10:41569501-41569764 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 176
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 35, 21

Conread position: 321-520
Cow position: chr10:30688454-30688659 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 11, 19

Conread position: 335-520
Cow position: chr10:2243429-2243616 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 45

Conread position: 336-521
Cow position: chr10:20268222-20268033 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 126, 44

Conread position: 336-523
Cow position: chr10:32364412-32364601 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 128, 167

Conread position: 338-521
Cow position: chr10:39210235-39210419 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 156, 0

Conread position: 338-523
Cow position: chr10:54929501-54929310 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 339-480
Cow position: chr10:38850729-38850874 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 122, 0

Conread position: 339-486
Cow position: chr10:57987227-57987076 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 120, 0

Conread position: 339-487
Cow position: chr10:20538780-20538931 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 122, 93

Conread position: 339-489
Cow position: chr10:8292601-8292756 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 120, 0

Conread position: 339-489
Cow position: chr10:28031453-28031299 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 120, 0

Conread position: 339-489
Cow position: chr10:29844204-29844051 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 119, 10

Conread position: 339-489
Cow position: chr10:32280322-32280476 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 120, 0

Conread position: 339-489
Cow position: chr10:32703238-32703392 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 120, 0

Conread position: 339-489
Cow position: chr10:38842639-38842793 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 120, 0

Conread position: 339-489
Cow position: chr10:49430119-49430273 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 146

Conread position: 339-489
Cow position: chr10:51557872-51558026 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 122, 0

Conread position: 339-491
Cow position: chr10:14333369-14333213 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 120, 0

Conread position: 339-492
Cow position: chr10:39038585-39038428 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 120, 0

Conread position: 339-492
Cow position: chr10:39849751-39849594 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 126, 0

Conread position: 339-499
Cow position: chr10:7279626-7279461 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 120, 0

Conread position: 339-520
Cow position: chr10:2118551-2118364 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 120, 0

Conread position: 339-520
Cow position: chr10:21426827-21426640 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 116, 0

Conread position: 339-520
Cow position: chr10:30683016-30682829 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 130
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 125, 0

Conread position: 339-521
Cow position: chr10:8324656-8324472 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 122, 62

Conread position: 339-521
Cow position: chr10:16928631-16928817 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 120, 81

Conread position: 339-521
Cow position: chr10:47156192-47156378 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 126, 108

Conread position: 339-522
Cow position: chr10:15620907-15620723 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 120, 146

Conread position: 339-522
Cow position: chr10:21450726-21450540 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 120, 173

Conread position: 339-522
Cow position: chr10:21516537-21516350 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 122, 174

Conread position: 339-522
Cow position: chr10:24756649-24756835 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 119, 135

Conread position: 339-522
Cow position: chr10:29107306-29107127 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 125, 0

Conread position: 339-522
Cow position: chr10:50017886-50017703 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 120, 52

Conread position: 339-522
Cow position: chr10:50198507-50198692 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 120, 21

Conread position: 339-522
Cow position: chr10:55099450-55099266 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 117, 135

Conread position: 339-522
Cow position: chr10:68097140-68096955 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 115, 87

Conread position: 339-523
Cow position: chr10:31526192-31526380 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 128, 172

Conread position: 340-499
Cow position: chr10:15831595-15831434 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 120, 20

Conread position: 340-522
Cow position: chr10:41149266-41149081 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 115, 172

Conread position: 341-521
Cow position: chr10:33868709-33868524 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 123, 0

Conread position: 341-522
Cow position: chr10:25255242-25255425 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 123, 57

Conread position: 341-522
Cow position: chr10:29629795-29629610 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 118, 172

Conread position: 342-523
Cow position: chr10:14865331-14865515 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 147
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 123, 168

Conread position: 345-485
Cow position: chr10:1663483-1663339 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 119, 0

Conread position: 345-486
Cow position: chr10:44706229-44706084 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 119, 0

Conread position: 345-489
Cow position: chr10:10584608-10584756 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 114, 0

Conread position: 345-492
Cow position: chr10:6287228-6287375 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 345-492
Cow position: chr10:53172839-53172688 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 119, 0

Conread position: 345-519
Cow position: chr10:35824862-35824686 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 115, 158

Conread position: 345-519
Cow position: chr10:41879418-41879597 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 119, 0

Conread position: 345-520
Cow position: chr10:2526182-2526360 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 114, 5

Conread position: 345-520
Cow position: chr10:5868082-5867901 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 119, 0

Conread position: 345-520
Cow position: chr10:8681102-8681283 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 119, 0

Conread position: 345-520
Cow position: chr10:13851625-13851806 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 119, 0

Conread position: 345-520
Cow position: chr10:17958563-17958743 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 119, 0

Conread position: 345-520
Cow position: chr10:19513710-19513891 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 117, 0

Conread position: 345-520
Cow position: chr10:19842151-19842330 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 119, 0

Conread position: 345-520
Cow position: chr10:21738247-21738067 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 119, 0

Conread position: 345-520
Cow position: chr10:23848444-23848625 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 119, 0

Conread position: 345-520
Cow position: chr10:25650939-25650759 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 119, 0

Conread position: 345-520
Cow position: chr10:30719171-30719352 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 114, 0

Conread position: 345-520
Cow position: chr10:31855961-31856142 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 119, 0

Conread position: 345-520
Cow position: chr10:39776525-39776346 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 122, 168

Conread position: 345-520
Cow position: chr10:47909101-47909278 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 149, 0

Conread position: 345-521
Cow position: chr10:278871-278691 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 119, 95

Conread position: 345-521
Cow position: chr10:7896003-7895822 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 119, 0

Conread position: 345-521
Cow position: chr10:26293007-26292827 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 119, 83

Conread position: 345-521
Cow position: chr10:32086168-32086349 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 119, 0

Conread position: 345-521
Cow position: chr10:32580716-32580897 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 119, 0

Conread position: 345-521
Cow position: chr10:39813913-39813732 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 123, 0

Conread position: 345-521
Cow position: chr10:40348175-40347998 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 149, 0

Conread position: 345-521
Cow position: chr10:41159900-41160076 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 119, 54

Conread position: 345-521
Cow position: chr10:51950618-51950437 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 119, 0

Conread position: 345-521
Cow position: chr10:57554857-57554676 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 119, 0

Conread position: 345-523
Cow position: chr10:25564074-25563899 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 119, 54

Conread position: 345-523
Cow position: chr10:32008556-32008736 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 119, 158

Conread position: 345-523
Cow position: chr10:62406292-62406111 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 114, 158

Conread position: 347-522
Cow position: chr10:37532306-37532132 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 118, 76

Conread position: 348-523
Cow position: chr10:36445174-36444995 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 104, 165

Conread position: 349-523
Cow position: chr10:55010299-55010472 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 112, 146

Conread position: 350-489
Cow position: chr10:34665277-34665134 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 105, 0

Conread position: 350-520
Cow position: chr10:24298021-24297845 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 374-518
Cow position: chr10:60362495-60362639 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 120, 84

Conread position: 396-522
Cow position: chr10:1721370-1721243 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 65, 114

Show alignments to all cow chromosomes.