Cow genome map

Conread name: rthg33_p11.y1

Conread position: 262-518
Cow position: chr15:37472584-37472323 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 180
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 66

Conread position: 265-489
Cow position: chr15:51911557-51911328 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 74, 21

Conread position: 265-521
Cow position: chr15:5939684-5939421 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 181
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 70, 21

Conread position: 296-521
Cow position: chr15:2618039-2617809 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 159, 0

Conread position: 333-521
Cow position: chr15:37631074-37631266 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 7, 50

Conread position: 334-486
Cow position: chr15:313739-313583 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 125, 0

Conread position: 335-489
Cow position: chr15:24297249-24297408 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 336-520
Cow position: chr15:25070436-25070249 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 128, 109

Conread position: 336-520
Cow position: chr15:25331487-25331673 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 158, 0

Conread position: 336-521
Cow position: chr15:4673302-4673492 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 129, 0

Conread position: 336-521
Cow position: chr15:7565061-7565249 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 128, 24

Conread position: 338-489
Cow position: chr15:4917258-4917411 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 127, 60

Conread position: 338-521
Cow position: chr15:31586334-31586150 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 156, 0

Conread position: 338-522
Cow position: chr15:43513-43701 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 123, 173

Conread position: 339-486
Cow position: chr15:7840363-7840514 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 126, 0

Conread position: 339-487
Cow position: chr15:4221073-4220921 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 123
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 123, 0

Conread position: 339-489
Cow position: chr15:4638994-4639148 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 120, 0

Conread position: 339-489
Cow position: chr15:4727265-4727420 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 339-489
Cow position: chr15:6119473-6119627 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 122, 0

Conread position: 339-489
Cow position: chr15:20412659-20412812 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 120, 38

Conread position: 339-489
Cow position: chr15:21534069-21533915 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 120, 0

Conread position: 339-489
Cow position: chr15:32491829-32491675 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 126, 0

Conread position: 339-489
Cow position: chr15:35751236-35751082 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 339-491
Cow position: chr15:6384493-6384337 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 120, 0

Conread position: 339-492
Cow position: chr15:21663684-21663526 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 120, 0

Conread position: 339-499
Cow position: chr15:27748070-27748235 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 120, 0

Conread position: 339-500
Cow position: chr15:32718533-32718367 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 119, 81

Conread position: 339-517
Cow position: chr15:31363526-31363709 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 120, 0

Conread position: 339-518
Cow position: chr15:8030393-8030209 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 120, 0

Conread position: 339-520
Cow position: chr15:12365468-12365651 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 136, 0

Conread position: 339-520
Cow position: chr15:17397783-17397970 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 128, 0

Conread position: 339-520
Cow position: chr15:32066195-32066008 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 128, 0

Conread position: 339-520
Cow position: chr15:51219801-51219988 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 120, 0

Conread position: 339-522
Cow position: chr15:1600647-1600834 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 122, 174

Conread position: 339-522
Cow position: chr15:5497116-5497303 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 122, 174

Conread position: 339-522
Cow position: chr15:5982706-5982891 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 126, 62

Conread position: 339-522
Cow position: chr15:6080765-6080952 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 120, 174

Conread position: 339-522
Cow position: chr15:6280687-6280874 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 40, 167

Conread position: 339-522
Cow position: chr15:7552684-7552868 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 126, 26

Conread position: 339-522
Cow position: chr15:14756062-14756245 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 120, 136

Conread position: 339-522
Cow position: chr15:21829996-21830185 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 120, 176

Conread position: 339-522
Cow position: chr15:35644391-35644205 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 126, 173

Conread position: 339-522
Cow position: chr15:35737848-35738026 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 151, 89

Conread position: 339-522
Cow position: chr15:43293110-43292929 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 154, 128

Conread position: 339-523
Cow position: chr15:2806817-2806630 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 126, 167

Conread position: 339-523
Cow position: chr15:6804625-6804815 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 120, 0

Conread position: 340-489
Cow position: chr15:4387815-4387964 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 340-489
Cow position: chr15:9431993-9432144 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 118, 23

Conread position: 340-517
Cow position: chr15:2900190-2900008 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 119, 146

Conread position: 340-521
Cow position: chr15:36623604-36623419 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 119, 169

Conread position: 341-520
Cow position: chr15:17295072-17295258 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 126, 0

Conread position: 341-521
Cow position: chr15:36330395-36330212 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 127
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 134, 0

Conread position: 344-521
Cow position: chr15:31270807-31270625 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 120, 0

Conread position: 345-487
Cow position: chr15:7236378-7236520 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 104
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 345-487
Cow position: chr15:18265696-18265550 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 119, 0

Conread position: 345-488
Cow position: chr15:2663453-2663600 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 119, 0

Conread position: 345-489
Cow position: chr15:18578778-18578925 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 114, 32

Conread position: 345-518
Cow position: chr15:16189703-16189524 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 119, 0

Conread position: 345-519
Cow position: chr15:16788710-16788533 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 116, 33

Conread position: 345-520
Cow position: chr15:2645580-2645399 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 119, 0

Conread position: 345-520
Cow position: chr15:3837396-3837215 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 119, 0

Conread position: 345-520
Cow position: chr15:7848416-7848597 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 119, 0

Conread position: 345-520
Cow position: chr15:22540753-22540572 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 119, 0

Conread position: 345-520
Cow position: chr15:27635494-27635675 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 119, 0

Conread position: 345-520
Cow position: chr15:28488057-28487880 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 148, 0

Conread position: 345-520
Cow position: chr15:42944540-42944361 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 119, 0

Conread position: 345-520
Cow position: chr15:52208607-52208787 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 119, 89

Conread position: 345-520
Cow position: chr15:52977022-52977203 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 119, 0

Conread position: 345-521
Cow position: chr15:1784400-1784581 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 126
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 119, 0

Conread position: 345-521
Cow position: chr15:2014566-2014747 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 114, 0

Conread position: 345-521
Cow position: chr15:3891632-3891813 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 114, 0

Conread position: 345-521
Cow position: chr15:4081071-4081252 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 119, 0

Conread position: 345-521
Cow position: chr15:4199074-4199255 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 119, 0

Conread position: 345-521
Cow position: chr15:4948571-4948752 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 119, 0

Conread position: 345-521
Cow position: chr15:6153863-6153684 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 126
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 113, 0

Conread position: 345-521
Cow position: chr15:6615087-6615264 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 149, 0

Conread position: 345-521
Cow position: chr15:13429889-13430070 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 119, 0

Conread position: 345-521
Cow position: chr15:17075354-17075173 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 119, 0

Conread position: 345-521
Cow position: chr15:33123448-33123629 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 119, 0

Conread position: 345-521
Cow position: chr15:36941320-36941140 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 116, 0

Conread position: 345-521
Cow position: chr15:43739192-43739013 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 127, 0

Conread position: 345-521
Cow position: chr15:50149388-50149569 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 122, 0

Conread position: 345-522
Cow position: chr15:13546982-13546799 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 116, 0

Conread position: 345-522
Cow position: chr15:20457119-20457299 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 167

Conread position: 345-523
Cow position: chr15:480646-480829 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 119, 0

Conread position: 345-523
Cow position: chr15:6330096-6330269 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 127, 6

Conread position: 345-523
Cow position: chr15:9395032-9395208 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 154, 0

Conread position: 345-523
Cow position: chr15:32713273-32713452 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 119, 50

Conread position: 346-519
Cow position: chr15:42531988-42532167 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 113, 0

Conread position: 346-523
Cow position: chr15:32702672-32702493 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 114, 149

Conread position: 347-516
Cow position: chr15:24287422-24287248 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 32, 161

Conread position: 347-523
Cow position: chr15:29969288-29969111 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 108, 158

Conread position: 348-520
Cow position: chr15:6563247-6563425 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 116, 0

Conread position: 348-521
Cow position: chr15:18229134-18229312 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 116, 0

Conread position: 349-523
Cow position: chr15:17682182-17682006 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 115, 126

Conread position: 349-523
Cow position: chr15:40063265-40063436 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 144, 115

Conread position: 350-522
Cow position: chr15:47202489-47202314 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 13, 29

Conread position: 357-489
Cow position: chr15:21452025-21452157 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 107, 9

Conread position: 378-519
Cow position: chr15:21840217-21840362 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 84, 135

Conread position: 378-520
Cow position: chr15:23559748-23559896 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 385-522
Cow position: chr15:16514173-16514314 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 74, 128

Show alignments to all cow chromosomes.