Cow genome map
Conread name: | rthg33_p11.y1 |
Conread position: | 265-523 |
Cow position: | chr17:24784369-24784632 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 180 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 59, 21 |
Conread position: | 268-522 |
Cow position: | chr17:20490520-20490777 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 176 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 35, 13 |
Conread position: | 333-489 |
Cow position: | chr17:15720727-15720885 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 120 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 7, 40 |
Conread position: | 338-522 |
Cow position: | chr17:1655475-1655287 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 140 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 121, 167 |
Conread position: | 339-482 |
Cow position: | chr17:11085402-11085255 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 110 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 120, 0 |
Conread position: | 339-489 |
Cow position: | chr17:136919-137073 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 115 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 120, 0 |
Conread position: | 339-489 |
Cow position: | chr17:6262140-6262294 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 115 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 120, 0 |
Conread position: | 339-489 |
Cow position: | chr17:8204205-8204360 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 124 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 339-489 |
Cow position: | chr17:16903162-16903316 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 118 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 120, 0 |
Conread position: | 339-489 |
Cow position: | chr17:25738577-25738731 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 118 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 120, 0 |
Conread position: | 339-492 |
Cow position: | chr17:14242104-14242261 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 117 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 120, 0 |
Conread position: | 339-514 |
Cow position: | chr17:39950787-39950608 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 132 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 122, 174 |
Conread position: | 339-519 |
Cow position: | chr17:18100804-18100622 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 133 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 128, 164 |
Conread position: | 339-520 |
Cow position: | chr17:20233027-20233212 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 138 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 69, 61 |
Conread position: | 339-520 |
Cow position: | chr17:36815970-36816155 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 135 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 123, 167 |
Conread position: | 339-521 |
Cow position: | chr17:253097-253286 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 136 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 120, 0 |
Conread position: | 339-521 |
Cow position: | chr17:14251030-14250839 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 138 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 87, 60 |
Conread position: | 339-521 |
Cow position: | chr17:15853000-15853187 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 133 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 120, 0 |
Conread position: | 339-521 |
Cow position: | chr17:16119951-16119767 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 137 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 120, 50 |
Conread position: | 339-522 |
Cow position: | chr17:11380910-11380723 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 146 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 128, 174 |
Conread position: | 339-522 |
Cow position: | chr17:20098034-20097851 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 135 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 116, 48 |
Conread position: | 339-523 |
Cow position: | chr17:1458670-1458858 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 142 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 35, 158 |
Conread position: | 339-523 |
Cow position: | chr17:22562425-22562612 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 146 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 123, 167 |
Conread position: | 340-489 |
Cow position: | chr17:1570109-1569956 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 118 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 125, 0 |
Conread position: | 340-489 |
Cow position: | chr17:20079608-20079452 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 116 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 340-492 |
Cow position: | chr17:2176261-2176418 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 120 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 340-520 |
Cow position: | chr17:14030567-14030381 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 136 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 119, 0 |
Conread position: | 341-489 |
Cow position: | chr17:1705681-1705831 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 116 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 118, 87 |
Conread position: | 341-512 |
Cow position: | chr17:4210294-4210471 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 136 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 120, 0 |
Conread position: | 341-521 |
Cow position: | chr17:21768833-21768647 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 134 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 123, 0 |
Conread position: | 342-502 |
Cow position: | chr17:4569536-4569698 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 115 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 342-523 |
Cow position: | chr17:4062612-4062796 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 134 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 123, 161 |
Conread position: | 345-486 |
Cow position: | chr17:15327569-15327713 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 107 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 114, 0 |
Conread position: | 345-489 |
Cow position: | chr17:22107360-22107212 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 111 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 114, 0 |
Conread position: | 345-520 |
Cow position: | chr17:40588-40769 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 130 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 119, 0 |
Conread position: | 345-520 |
Cow position: | chr17:147216-147397 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 138 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 116, 0 |
Conread position: | 345-520 |
Cow position: | chr17:2264471-2264652 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 133 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 114, 0 |
Conread position: | 345-520 |
Cow position: | chr17:3742446-3742627 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 131 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 119, 0 |
Conread position: | 345-520 |
Cow position: | chr17:13418686-13418867 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 129 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 119, 0 |
Conread position: | 345-520 |
Cow position: | chr17:15438081-15438262 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 132 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 119, 0 |
Conread position: | 345-520 |
Cow position: | chr17:15709707-15709526 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 131 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 119, 0 |
Conread position: | 345-520 |
Cow position: | chr17:23322142-23321964 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 129 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 119, 83 |
Conread position: | 345-520 |
Cow position: | chr17:27792497-27792316 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 129 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 119, 0 |
Conread position: | 345-521 |
Cow position: | chr17:452118-452299 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 128 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 114, 0 |
Conread position: | 345-521 |
Cow position: | chr17:5307453-5307272 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 131 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 119, 0 |
Conread position: | 345-521 |
Cow position: | chr17:14214751-14214570 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 131 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 109, 0 |
Conread position: | 345-521 |
Cow position: | chr17:15808257-15808438 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 131 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 119, 0 |
Conread position: | 345-521 |
Cow position: | chr17:17127253-17127434 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 130 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 114, 0 |
Conread position: | 345-521 |
Cow position: | chr17:17257805-17257982 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 129 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 154, 0 |
Conread position: | 345-521 |
Cow position: | chr17:29825679-29825504 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 128 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 149, 119 |
Conread position: | 345-523 |
Cow position: | chr17:19979842-19979664 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 129 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 119, 83 |
Conread position: | 346-521 |
Cow position: | chr17:8210938-8211118 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 129 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 118, 0 |
Conread position: | 349-518 |
Cow position: | chr17:51908-51734 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 129 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 110, 65 |
Conread position: | 351-520 |
Cow position: | chr17:40809485-40809652 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 119 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 141, 0 |
Conread position: | 361-521 |
Cow position: | chr17:11785179-11785344 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 120 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 103, 0 |
Conread position: | 372-522 |
Cow position: | chr17:18823380-18823530 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 112 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 71, 116 |
Show alignments to all cow chromosomes.