Cow genome map
| Conread name: | rthg33_p11.y1 |
| Conread position: | 265-489 |
| Cow position: | chr18:28969871-28969637 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 265-499 |
| Cow position: | chr18:25353664-25353909 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 326-522 |
| Cow position: | chr18:36647656-36647855 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 14, 152 |
| Conread position: | 337-492 |
| Cow position: | chr18:16464367-16464214 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 337-521 |
| Cow position: | chr18:56484182-56483995 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 128, 62 |
| Conread position: | 339-485 |
| Cow position: | chr18:23702587-23702437 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 339-486 |
| Cow position: | chr18:37508464-37508611 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 122, 32 |
| Conread position: | 339-487 |
| Cow position: | chr18:29239596-29239747 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 126, 40 |
| Conread position: | 339-489 |
| Cow position: | chr18:14418472-14418626 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 339-489 |
| Cow position: | chr18:16092314-16092468 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 339-489 |
| Cow position: | chr18:16174111-16173961 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 339-489 |
| Cow position: | chr18:25922888-25923042 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 339-489 |
| Cow position: | chr18:27835589-27835435 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 339-489 |
| Cow position: | chr18:38160363-38160209 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 339-499 |
| Cow position: | chr18:23801518-23801683 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 339-515 |
| Cow position: | chr18:16136155-16135973 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 52, 43 |
| Conread position: | 339-520 |
| Cow position: | chr18:5535490-5535671 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 154, 125 |
| Conread position: | 339-520 |
| Cow position: | chr18:29864110-29863923 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 339-520 |
| Cow position: | chr18:51484093-51484280 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 339-520 |
| Cow position: | chr18:54066547-54066368 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 154, 66 |
| Conread position: | 339-521 |
| Cow position: | chr18:28083550-28083736 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 120, 174 |
| Conread position: | 339-521 |
| Cow position: | chr18:33521709-33521897 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 339-521 |
| Cow position: | chr18:36775772-36775958 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 339-521 |
| Cow position: | chr18:40343782-40343596 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 74, 62 |
| Conread position: | 339-522 |
| Cow position: | chr18:17671436-17671249 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 7, 41 |
| Conread position: | 339-523 |
| Cow position: | chr18:14128791-14128603 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 128, 95 |
| Conread position: | 340-516 |
| Cow position: | chr18:54026297-54026479 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 342-478 |
| Cow position: | chr18:51273605-51273465 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 342-522 |
| Cow position: | chr18:17322905-17323085 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 151, 167 |
| Conread position: | 342-522 |
| Cow position: | chr18:35291051-35291234 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 31, 170 |
| Conread position: | 345-489 |
| Cow position: | chr18:33101828-33101971 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 345-492 |
| Cow position: | chr18:10221532-10221682 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 345-499 |
| Cow position: | chr18:36511122-36511281 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 345-519 |
| Cow position: | chr18:17095316-17095494 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 116, 164 |
| Conread position: | 345-519 |
| Cow position: | chr18:32437600-32437420 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 345-520 |
| Cow position: | chr18:1956667-1956486 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 345-520 |
| Cow position: | chr18:3755446-3755627 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 345-520 |
| Cow position: | chr18:22183027-22182846 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 345-520 |
| Cow position: | chr18:24618932-24619109 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 345-520 |
| Cow position: | chr18:32165427-32165250 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 345-520 |
| Cow position: | chr18:47711629-47711808 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 345-520 |
| Cow position: | chr18:51662651-51662832 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 345-520 |
| Cow position: | chr18:55417226-55417407 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 345-521 |
| Cow position: | chr18:5202028-5202209 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 345-521 |
| Cow position: | chr18:16081027-16081208 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 345-521 |
| Cow position: | chr18:18216010-18216191 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 345-521 |
| Cow position: | chr18:21530027-21530209 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 345-521 |
| Cow position: | chr18:26244076-26243895 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 345-521 |
| Cow position: | chr18:28929089-28928908 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 345-521 |
| Cow position: | chr18:30762456-30762275 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 345-521 |
| Cow position: | chr18:51344606-51344787 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 345-523 |
| Cow position: | chr18:37700987-37700812 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 348-516 |
| Cow position: | chr18:16558208-16558380 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 114, 86 |
Show alignments to all cow chromosomes.