Cow genome map
| Conread name: | rthg33_p11.y1 |
| Conread position: | 264-522 |
| Cow position: | chr20:14867986-14867732 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 75, 18 |
| Conread position: | 265-521 |
| Cow position: | chr20:5537313-5537579 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 24, 101 |
| Conread position: | 316-522 |
| Cow position: | chr20:14757815-14757605 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 138, 197 |
| Conread position: | 338-521 |
| Cow position: | chr20:21719028-21719219 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 339-459 |
| Cow position: | chr20:35144416-35144296 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 339-484 |
| Cow position: | chr20:23801355-23801504 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 339-486 |
| Cow position: | chr20:12435933-12435782 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 339-489 |
| Cow position: | chr20:13765361-13765514 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 122, 108 |
| Conread position: | 339-489 |
| Cow position: | chr20:15294431-15294585 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 339-489 |
| Cow position: | chr20:17659282-17659129 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 339-489 |
| Cow position: | chr20:25846157-25846003 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 39 |
| Conread position: | 339-489 |
| Cow position: | chr20:30688037-30688190 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 120, 111 |
| Conread position: | 339-492 |
| Cow position: | chr20:29313283-29313440 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 339-499 |
| Cow position: | chr20:12568847-12568683 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 120, 95 |
| Conread position: | 339-499 |
| Cow position: | chr20:23805413-23805249 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 120, 38 |
| Conread position: | 339-499 |
| Cow position: | chr20:27875946-27876110 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 339-499 |
| Cow position: | chr20:28163508-28163673 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 339-518 |
| Cow position: | chr20:23467200-23467019 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 120, 164 |
| Conread position: | 339-520 |
| Cow position: | chr20:19844254-19844435 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 154, 137 |
| Conread position: | 339-520 |
| Cow position: | chr20:21396992-21397173 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 155, 33 |
| Conread position: | 339-521 |
| Cow position: | chr20:12046979-12047165 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 122, 24 |
| Conread position: | 339-521 |
| Cow position: | chr20:13654819-13654641 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 120, 60 |
| Conread position: | 339-521 |
| Cow position: | chr20:35019385-35019572 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 339-522 |
| Cow position: | chr20:9995763-9995948 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 120, 88 |
| Conread position: | 339-522 |
| Cow position: | chr20:16177300-16177111 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 339-523 |
| Cow position: | chr20:6475994-6476181 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 119, 167 |
| Conread position: | 340-520 |
| Cow position: | chr20:8214530-8214352 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 341-520 |
| Cow position: | chr20:35160114-35159930 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 345-492 |
| Cow position: | chr20:18093715-18093564 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 345-499 |
| Cow position: | chr20:16105901-16106060 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 345-520 |
| Cow position: | chr20:752617-752798 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 345-520 |
| Cow position: | chr20:3809300-3809119 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 345-520 |
| Cow position: | chr20:16560072-16559891 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 345-520 |
| Cow position: | chr20:18355700-18355881 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 345-520 |
| Cow position: | chr20:30578361-30578538 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 345-520 |
| Cow position: | chr20:39233700-39233881 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 345-521 |
| Cow position: | chr20:20440480-20440301 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 119, 15 |
| Conread position: | 345-521 |
| Cow position: | chr20:24541895-24542076 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 345-521 |
| Cow position: | chr20:24568800-24568619 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 345-521 |
| Cow position: | chr20:28444878-28444697 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 345-523 |
| Cow position: | chr20:19440385-19440564 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 119, 79 |
| Conread position: | 347-479 |
| Cow position: | chr20:19424518-19424653 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 88, 57 |
| Conread position: | 347-523 |
| Cow position: | chr20:28959090-28958909 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 360-489 |
| Cow position: | chr20:19243959-19244091 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 105, 79 |
| Conread position: | 360-521 |
| Cow position: | chr20:8971406-8971241 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 99, 41 |
| Conread position: | 373-520 |
| Cow position: | chr20:19342599-19342747 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 92, 28 |
| Conread position: | 381-522 |
| Cow position: | chr20:13794632-13794777 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 84, 129 |
Show alignments to all cow chromosomes.