Cow genome map
| Conread name: | rthg33_p11.y1 |
| Conread position: | 265-487 |
| Cow position: | chr24:6657848-6657617 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 62, 21 |
| Conread position: | 282-486 |
| Cow position: | chr24:40467984-40467779 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 176, 47 |
| Conread position: | 312-522 |
| Cow position: | chr24:36712716-36712925 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 150, 12 |
| Conread position: | 338-489 |
| Cow position: | chr24:16559818-16559663 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 339-489 |
| Cow position: | chr24:6411967-6412120 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 339-489 |
| Cow position: | chr24:12088688-12088842 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 339-489 |
| Cow position: | chr24:12333234-12333080 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 339-489 |
| Cow position: | chr24:19835895-19836049 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 339-489 |
| Cow position: | chr24:19884781-19884935 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 339-489 |
| Cow position: | chr24:29189774-29189928 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 339-499 |
| Cow position: | chr24:11691512-11691347 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 339-519 |
| Cow position: | chr24:18267999-18267814 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 126, 77 |
| Conread position: | 339-519 |
| Cow position: | chr24:33321398-33321213 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 339-519 |
| Cow position: | chr24:39680011-39680191 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 125, 131 |
| Conread position: | 339-520 |
| Cow position: | chr24:13300367-13300180 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 122, 175 |
| Conread position: | 339-521 |
| Cow position: | chr24:12148613-12148426 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 339-521 |
| Cow position: | chr24:14377169-14376982 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 339-521 |
| Cow position: | chr24:16647417-16647231 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 122, 171 |
| Conread position: | 339-521 |
| Cow position: | chr24:32362634-32362445 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 339-521 |
| Cow position: | chr24:38640627-38640810 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 120, 12 |
| Conread position: | 339-522 |
| Cow position: | chr24:6338855-6339042 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 49, 42 |
| Conread position: | 339-522 |
| Cow position: | chr24:29154847-29155035 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 115, 172 |
| Conread position: | 339-522 |
| Cow position: | chr24:31380905-31381090 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 43, 172 |
| Conread position: | 339-523 |
| Cow position: | chr24:36557093-36556905 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 128, 168 |
| Conread position: | 340-520 |
| Cow position: | chr24:36724555-36724740 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 119, 173 |
| Conread position: | 340-521 |
| Cow position: | chr24:19642408-19642593 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 122, 173 |
| Conread position: | 341-520 |
| Cow position: | chr24:30895317-30895499 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 118, 36 |
| Conread position: | 342-523 |
| Cow position: | chr24:25438781-25438954 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 130, 57 |
| Conread position: | 345-492 |
| Cow position: | chr24:13234733-13234884 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 345-519 |
| Cow position: | chr24:6963342-6963522 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 345-520 |
| Cow position: | chr24:6021586-6021406 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 345-520 |
| Cow position: | chr24:25371428-25371609 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 345-521 |
| Cow position: | chr24:208508-208331 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 345-521 |
| Cow position: | chr24:3850061-3850242 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 345-521 |
| Cow position: | chr24:6440246-6440427 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 345-521 |
| Cow position: | chr24:7064056-7064238 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 345-521 |
| Cow position: | chr24:12698524-12698343 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 345-521 |
| Cow position: | chr24:16081994-16081813 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 345-521 |
| Cow position: | chr24:17323186-17323367 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 345-521 |
| Cow position: | chr24:19689087-19688908 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 119, 83 |
| Conread position: | 345-521 |
| Cow position: | chr24:19704195-19704372 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 345-521 |
| Cow position: | chr24:20366859-20367040 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 345-521 |
| Cow position: | chr24:21248454-21248273 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 345-521 |
| Cow position: | chr24:40551117-40551298 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 345-523 |
| Cow position: | chr24:14350492-14350673 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 119, 158 |
| Conread position: | 347-517 |
| Cow position: | chr24:11150629-11150459 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 117, 151 |
| Conread position: | 347-517 |
| Cow position: | chr24:16907838-16908006 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 108, 42 |
| Conread position: | 348-520 |
| Cow position: | chr24:16473460-16473633 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 107, 24 |
| Conread position: | 360-520 |
| Cow position: | chr24:6078938-6079104 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 360-521 |
| Cow position: | chr24:1949998-1950164 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 378-520 |
| Cow position: | chr24:29085346-29085200 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 86, 0 |
Show alignments to all cow chromosomes.