Cow genome map

Conread name: rthg33_p11.y1

Conread position: 265-489
Cow position: chr7:21989015-21989250 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 265-522
Cow position: chr7:14213016-14212753 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 179
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 85, 21

Conread position: 333-489
Cow position: chr7:5305533-5305372 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 333-489
Cow position: chr7:11421126-11420965 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 7, 46

Conread position: 335-523
Cow position: chr7:67496689-67496876 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 128, 44

Conread position: 337-521
Cow position: chr7:39132370-39132183 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 128, 0

Conread position: 338-521
Cow position: chr7:21424905-21424717 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 126, 0

Conread position: 339-469
Cow position: chr7:53363714-53363584 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 339-479
Cow position: chr7:68853503-68853359 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 117, 0

Conread position: 339-482
Cow position: chr7:61138760-61138614 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 119, 85

Conread position: 339-486
Cow position: chr7:55535454-55535307 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 339-489
Cow position: chr7:195437-195283 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 123, 0

Conread position: 339-489
Cow position: chr7:443796-443643 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 120, 21

Conread position: 339-489
Cow position: chr7:8142511-8142357 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 120, 0

Conread position: 339-489
Cow position: chr7:8742813-8742661 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 126, 89

Conread position: 339-489
Cow position: chr7:10428960-10428806 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 121, 0

Conread position: 339-489
Cow position: chr7:13531444-13531290 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 120, 0

Conread position: 339-489
Cow position: chr7:24806026-24805872 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 120, 0

Conread position: 339-489
Cow position: chr7:27107295-27107140 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 339-489
Cow position: chr7:34414594-34414440 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 119, 0

Conread position: 339-489
Cow position: chr7:45614011-45613857 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 120, 0

Conread position: 339-489
Cow position: chr7:47191278-47191126 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 120, 46

Conread position: 339-492
Cow position: chr7:46748448-46748604 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 120, 45

Conread position: 339-499
Cow position: chr7:14136389-14136224 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 122, 0

Conread position: 339-499
Cow position: chr7:34151408-34151572 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 120, 0

Conread position: 339-499
Cow position: chr7:42225335-42225169 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 120, 0

Conread position: 339-504
Cow position: chr7:24933096-24932926 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 120, 0

Conread position: 339-519
Cow position: chr7:48637183-48637366 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 126, 142

Conread position: 339-519
Cow position: chr7:65625706-65625520 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 124, 0

Conread position: 339-520
Cow position: chr7:19883013-19882828 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 145
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 120, 174

Conread position: 339-520
Cow position: chr7:33066248-33066063 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 116, 0

Conread position: 339-520
Cow position: chr7:45946393-45946206 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 120, 0

Conread position: 339-520
Cow position: chr7:49827883-49827699 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 78, 0

Conread position: 339-520
Cow position: chr7:67431021-67431207 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 124, 174

Conread position: 339-521
Cow position: chr7:100105-99915 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 178

Conread position: 339-521
Cow position: chr7:997669-997856 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 120, 0

Conread position: 339-521
Cow position: chr7:22346215-22346402 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 120, 0

Conread position: 339-521
Cow position: chr7:39552882-39552694 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 77

Conread position: 339-521
Cow position: chr7:59559917-59559733 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 133, 125

Conread position: 339-522
Cow position: chr7:18935213-18935026 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 120, 174

Conread position: 339-522
Cow position: chr7:27458271-27458085 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 125, 170

Conread position: 339-522
Cow position: chr7:31876732-31876919 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 120, 171

Conread position: 339-522
Cow position: chr7:42872585-42872765 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 155, 110

Conread position: 339-522
Cow position: chr7:58920413-58920598 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 122, 38

Conread position: 339-523
Cow position: chr7:736284-736098 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 8, 26

Conread position: 339-523
Cow position: chr7:1555858-1556052 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 171

Conread position: 339-523
Cow position: chr7:33070039-33069852 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 120, 167

Conread position: 339-523
Cow position: chr7:64247137-64246948 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 120, 0

Conread position: 339-523
Cow position: chr7:64354478-64354668 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 116, 0

Conread position: 341-520
Cow position: chr7:26456775-26456590 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 60, 89

Conread position: 341-521
Cow position: chr7:58336559-58336374 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 124, 0

Conread position: 341-522
Cow position: chr7:21316620-21316803 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 124, 87

Conread position: 341-522
Cow position: chr7:39596869-39596688 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 123, 10

Conread position: 342-514
Cow position: chr7:26836881-26837058 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 117, 0

Conread position: 342-522
Cow position: chr7:537376-537193 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 113, 170

Conread position: 344-462
Cow position: chr7:43280350-43280470 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 345-489
Cow position: chr7:52408006-52408154 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 125, 0

Conread position: 345-492
Cow position: chr7:3298201-3298050 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 119, 0

Conread position: 345-492
Cow position: chr7:65813305-65813456 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 119, 0

Conread position: 345-506
Cow position: chr7:39531514-39531347 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 122, 0

Conread position: 345-517
Cow position: chr7:68262800-68262977 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 116, 169

Conread position: 345-520
Cow position: chr7:13442-13260 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 345-520
Cow position: chr7:20151245-20151068 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 149, 0

Conread position: 345-520
Cow position: chr7:20558251-20558432 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 119, 0

Conread position: 345-520
Cow position: chr7:23535134-23535315 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 119, 0

Conread position: 345-520
Cow position: chr7:27099803-27099622 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 119, 0

Conread position: 345-520
Cow position: chr7:37165330-37165510 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 119, 0

Conread position: 345-520
Cow position: chr7:39749192-39749369 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 149, 0

Conread position: 345-520
Cow position: chr7:46265635-46265812 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 149, 0

Conread position: 345-520
Cow position: chr7:54692895-54693076 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 119, 0

Conread position: 345-520
Cow position: chr7:60465187-60465368 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 119, 0

Conread position: 345-520
Cow position: chr7:61577667-61577485 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 345-521
Cow position: chr7:1331946-1331766 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 125, 0

Conread position: 345-521
Cow position: chr7:1442368-1442187 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 119, 0

Conread position: 345-521
Cow position: chr7:5260471-5260290 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 114, 0

Conread position: 345-521
Cow position: chr7:7260991-7261172 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 345-521
Cow position: chr7:8337846-8338027 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 119, 0

Conread position: 345-521
Cow position: chr7:19181680-19181499 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 345-521
Cow position: chr7:20434293-20434473 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 119, 81

Conread position: 345-521
Cow position: chr7:20796984-20796809 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 128, 106

Conread position: 345-521
Cow position: chr7:25442245-25442420 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 148, 119

Conread position: 345-521
Cow position: chr7:45170006-45170187 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 116, 0

Conread position: 345-521
Cow position: chr7:55040011-55039830 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 120, 0

Conread position: 345-521
Cow position: chr7:59773782-59773960 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 114, 158

Conread position: 345-521
Cow position: chr7:64011892-64012073 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 119, 0

Conread position: 345-521
Cow position: chr7:65557951-65557771 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 118, 0

Conread position: 345-522
Cow position: chr7:26927705-26927523 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 119, 0

Conread position: 345-523
Cow position: chr7:52763175-52762998 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 110, 18

Conread position: 345-523
Cow position: chr7:56823276-56823456 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 148
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 114, 164

Conread position: 346-521
Cow position: chr7:11461660-11461480 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 118, 0

Conread position: 346-523
Cow position: chr7:6665969-6666148 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 118, 157

Conread position: 347-519
Cow position: chr7:6722502-6722679 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 117, 0

Conread position: 347-520
Cow position: chr7:547321-547496 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 146, 0

Conread position: 347-520
Cow position: chr7:6626904-6626726 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 117, 69

Conread position: 347-523
Cow position: chr7:51839667-51839850 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 18, 165

Conread position: 347-523
Cow position: chr7:67491111-67491287 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 73

Conread position: 348-507
Cow position: chr7:49732755-49732917 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 101, 126

Conread position: 348-522
Cow position: chr7:49071538-49071360 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 111, 165

Conread position: 348-522
Cow position: chr7:54640590-54640414 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 117, 31

Conread position: 350-523
Cow position: chr7:57025580-57025406 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 82, 155

Conread position: 351-522
Cow position: chr7:19265440-19265265 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 107, 162

Conread position: 351-522
Cow position: chr7:42428068-42428246 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 31, 112

Conread position: 353-522
Cow position: chr7:3157775-3157948 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 114, 160

Conread position: 360-521
Cow position: chr7:36344295-36344133 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 133, 0

Conread position: 373-520
Cow position: chr7:46194760-46194607 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 91, 0

Show alignments to all cow chromosomes.