• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
rthg35_b22.y1
        

               
Conread position:
               
1-185
               

               
Cow position:
               
chr20:24902489-24902684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
74, 8
               

               
Conread position:
               
3-176
               

               
Cow position:
               
chr20:5116330-5116507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
73, 8
               

               
Conread position:
               
5-296
               

               
Cow position:
               
chr20:35063980-35064270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
73, 12
               

               
Conread position:
               
5-317
               

               
Cow position:
               
chr20:27642110-27641792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 8
               

               
Conread position:
               
5-320
               

               
Cow position:
               
chr20:8112787-8112467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 8
               

               
Conread position:
               
5-320
               

               
Cow position:
               
chr20:12567119-12567434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 8
               

               
Conread position:
               
5-320
               

               
Cow position:
               
chr20:21959081-21959402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 8
               

               
Conread position:
               
5-320
               

               
Cow position:
               
chr20:28726258-28725938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 315
               

               
Conread position:
               
5-325
               

               
Cow position:
               
chr20:5539360-5539037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 8
               

               
Conread position:
               
6-320
               

               
Cow position:
               
chr20:26825662-26825969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
67, 7
               

               
Conread position:
               
8-205
               

               
Cow position:
               
chr20:41704132-41703922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
37, 8
               

               
Conread position:
               
9-126
               

               
Cow position:
               
chr20:5024979-5025095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
41, 66
               

               
Conread position:
               
9-157
               

               
Cow position:
               
chr20:35741720-35741570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
16, 72
               

               
Conread position:
               
9-166
               

               
Cow position:
               
chr20:35760636-35760479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
91, 34
               

               
Conread position:
               
9-193
               

               
Cow position:
               
chr20:5025338-5025522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
41, 66
               

               
Conread position:
               
9-232
               

               
Cow position:
               
chr20:22065037-22064814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
9-263
               

               
Cow position:
               
chr20:39728415-39728161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 181
               

               
Conread position:
               
9-320
               

               
Cow position:
               
chr20:20983963-20983678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 37
               

               
Conread position:
               
9-320
               

               
Cow position:
               
chr20:26469097-26469425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
9-325
               

               
Cow position:
               
chr20:22959375-22959697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 232
               

               
Conread position:
               
10-94
               

               
Cow position:
               
chr20:5633391-5633478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
88
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
10-99
               

               
Cow position:
               
chr20:27003768-27003854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
90
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
10-103
               

               
Cow position:
               
chr20:40449977-40449881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
10-116
               

               
Cow position:
               
chr20:30710679-30710787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
36, 97
               

               
Conread position:
               
10-118
               

               
Cow position:
               
chr20:14917269-14917156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
10-120
               

               
Cow position:
               
chr20:9730051-9729939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
66, 33
               

               
Conread position:
               
10-124
               

               
Cow position:
               
chr20:36010761-36010639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
10-131
               

               
Cow position:
               
chr20:13025644-13025765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
66, 102
               

               
Conread position:
               
10-133
               

               
Cow position:
               
chr20:34221446-34221314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 10
               

               
Conread position:
               
10-134
               

               
Cow position:
               
chr20:9701611-9701735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
66, 96
               

               
Conread position:
               
10-137
               

               
Cow position:
               
chr20:271456-271586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
10-141
               

               
Cow position:
               
chr20:14100467-14100605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
43, 112
               

               
Conread position:
               
10-143
               

               
Cow position:
               
chr20:28831934-28831794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
10-146
               

               
Cow position:
               
chr20:16935334-16935475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
66, 36
               

               
Conread position:
               
10-152
               

               
Cow position:
               
chr20:37272679-37272538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
41, 116
               

               
Conread position:
               
10-156
               

               
Cow position:
               
chr20:3740032-3740183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
10-157
               

               
Cow position:
               
chr20:11864165-11864319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
10-165
               

               
Cow position:
               
chr20:11043537-11043687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
10-165
               

               
Cow position:
               
chr20:23846704-23846863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
68, 35
               

               
Conread position:
               
10-165
               

               
Cow position:
               
chr20:34097993-34098149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
66, 34
               

               
Conread position:
               
10-165
               

               
Cow position:
               
chr20:38415004-38415162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
42, 67
               

               
Conread position:
               
10-166
               

               
Cow position:
               
chr20:21928871-21928713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
36, 142
               

               
Conread position:
               
10-168
               

               
Cow position:
               
chr20:13994779-13994615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
10-170
               

               
Cow position:
               
chr20:36207770-36207606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
66, 35
               

               
Conread position:
               
10-175
               

               
Cow position:
               
chr20:20351020-20351191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
10-182
               

               
Cow position:
               
chr20:9379375-9379200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
10-182
               

               
Cow position:
               
chr20:34918237-34918070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
156, 59
               

               
Conread position:
               
10-186
               

               
Cow position:
               
chr20:8020863-8020682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
66, 36
               

               
Conread position:
               
10-186
               

               
Cow position:
               
chr20:11482169-11482352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
10-186
               

               
Cow position:
               
chr20:14879752-14879573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
66, 36
               

               
Conread position:
               
10-186
               

               
Cow position:
               
chr20:28296257-28296077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
10-187
               

               
Cow position:
               
chr20:35907086-35907260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
10-187
               

               
Cow position:
               
chr20:38873042-38873226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
10-189
               

               
Cow position:
               
chr20:26680091-26679908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
39, 146
               

               
Conread position:
               
10-193
               

               
Cow position:
               
chr20:7442162-7442344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
145, 36
               

               
Conread position:
               
10-194
               

               
Cow position:
               
chr20:3321176-3321355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
10-194
               

               
Cow position:
               
chr20:11741335-11741524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
66, 34
               

               
Conread position:
               
10-195
               

               
Cow position:
               
chr20:11923277-11923463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
68, 84
               

               
Conread position:
               
10-195
               

               
Cow position:
               
chr20:14572394-14572578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
157, 36
               

               
Conread position:
               
10-195
               

               
Cow position:
               
chr20:22704257-22704066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
65, 36
               

               
Conread position:
               
10-195
               

               
Cow position:
               
chr20:37200324-37200138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
37, 107
               

               
Conread position:
               
10-198
               

               
Cow position:
               
chr20:4205933-4205738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
54, 36
               

               
Conread position:
               
10-198
               

               
Cow position:
               
chr20:39019659-39019471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
66, 34
               

               
Conread position:
               
10-204
               

               
Cow position:
               
chr20:40511793-40511991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
66, 36
               

               
Conread position:
               
10-206
               

               
Cow position:
               
chr20:3331322-3331527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
10-208
               

               
Cow position:
               
chr20:16941347-16941557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
42, 85
               

               
Conread position:
               
10-213
               

               
Cow position:
               
chr20:20312781-20312977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 35
               

               
Conread position:
               
10-217
               

               
Cow position:
               
chr20:40127370-40127580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
10-218
               

               
Cow position:
               
chr20:38578794-38578999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
63, 36
               

               
Conread position:
               
10-221
               

               
Cow position:
               
chr20:24521717-24521503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
10-232
               

               
Cow position:
               
chr20:15582072-15582294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 19
               

               
Conread position:
               
10-232
               

               
Cow position:
               
chr20:35999657-35999429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
46, 68
               

               
Conread position:
               
10-236
               

               
Cow position:
               
chr20:13967294-13967522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 82
               

               
Conread position:
               
10-241
               

               
Cow position:
               
chr20:32636601-32636832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 33
               

               
Conread position:
               
10-248
               

               
Cow position:
               
chr20:21714721-21714477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 99
               

               
Conread position:
               
10-261
               

               
Cow position:
               
chr20:10884392-10884654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
10-263
               

               
Cow position:
               
chr20:39417932-39418180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
36, 69
               

               
Conread position:
               
10-278
               

               
Cow position:
               
chr20:6240556-6240834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 36
               

               
Conread position:
               
10-281
               

               
Cow position:
               
chr20:35797574-35797299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 52
               

               
Conread position:
               
10-287
               

               
Cow position:
               
chr20:18399729-18399447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr20:19328367-19328087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 56
               

               
Conread position:
               
10-291
               

               
Cow position:
               
chr20:14615032-14615295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
152, 53
               

               
Conread position:
               
10-291
               

               
Cow position:
               
chr20:19237044-19236773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 140
               

               
Conread position:
               
10-294
               

               
Cow position:
               
chr20:24398669-24398952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 70
               

               
Conread position:
               
10-297
               

               
Cow position:
               
chr20:19146840-19146543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
10-300
               

               
Cow position:
               
chr20:17251681-17251385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 117
               

               
Conread position:
               
10-304
               

               
Cow position:
               
chr20:33144587-33144884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 171
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr20:19410399-19410700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 54
               

               
Conread position:
               
10-310
               

               
Cow position:
               
chr20:580957-581264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 34
               

               
Conread position:
               
10-317
               

               
Cow position:
               
chr20:18185532-18185234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 32
               

               
Conread position:
               
10-317
               

               
Cow position:
               
chr20:41977380-41977079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
10-318
               

               
Cow position:
               
chr20:12334340-12334038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 63
               

               
Conread position:
               
10-318
               

               
Cow position:
               
chr20:14756102-14756412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
10-318
               

               
Cow position:
               
chr20:17733809-17734117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 153
               

               
Conread position:
               
10-318
               

               
Cow position:
               
chr20:18320826-18321139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 36
               

               
Conread position:
               
10-318
               

               
Cow position:
               
chr20:23679182-23679492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
10-318
               

               
Cow position:
               
chr20:40423124-40423435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
10-319
               

               
Cow position:
               
chr20:6501770-6501455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 65
               

               
Conread position:
               
10-319
               

               
Cow position:
               
chr20:12441720-12442036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 152
               

               
Conread position:
               
10-319
               

               
Cow position:
               
chr20:14735641-14735315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 36
               

               
Conread position:
               
10-319
               

               
Cow position:
               
chr20:19751273-19750966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 36
               

               
Conread position:
               
10-319
               

               
Cow position:
               
chr20:34597135-34597462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
68, 36
               

               
Conread position:
               
10-320
               

               
Cow position:
               
chr20:746912-746613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 69
               

               
Conread position:
               
10-320
               

               
Cow position:
               
chr20:3781461-3781779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 36
               

               
Conread position:
               
10-320
               

               
Cow position:
               
chr20:4945280-4945592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 71
               

               
Conread position:
               
10-320
               

               
Cow position:
               
chr20:5104475-5104781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
10-320
               

               
Cow position:
               
chr20:9014380-9014695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 15
               

               
Conread position:
               
10-320
               

               
Cow position:
               
chr20:9473649-9473960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 60
               

               
Conread position:
               
10-320
               

               
Cow position:
               
chr20:9537102-9536790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 196
               

               
Conread position:
               
10-320
               

               
Cow position:
               
chr20:12996045-12996360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 42
               

               
Conread position:
               
10-320
               

               
Cow position:
               
chr20:13652387-13652710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
36, 98
               

               
Conread position:
               
10-320
               

               
Cow position:
               
chr20:16715363-16715057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 25
               

               
Conread position:
               
10-320
               

               
Cow position:
               
chr20:17904125-17903812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 33
               

               
Conread position:
               
10-320
               

               
Cow position:
               
chr20:19313097-19313412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 33
               

               
Conread position:
               
10-320
               

               
Cow position:
               
chr20:27340028-27339716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 14
               

               
Conread position:
               
10-320
               

               
Cow position:
               
chr20:29845016-29844696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 67
               

               
Conread position:
               
10-320
               

               
Cow position:
               
chr20:30817500-30817189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 35
               

               
Conread position:
               
10-320
               

               
Cow position:
               
chr20:31077519-31077189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 236
               

               
Conread position:
               
10-320
               

               
Cow position:
               
chr20:33177155-33176853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
34, 71
               

               
Conread position:
               
10-320
               

               
Cow position:
               
chr20:38817971-38817669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 36
               

               
Conread position:
               
10-320
               

               
Cow position:
               
chr20:39377188-39377486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 65
               

               
Conread position:
               
10-320
               

               
Cow position:
               
chr20:39415710-39415408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
67, 129
               

               
Conread position:
               
10-320
               

               
Cow position:
               
chr20:40303903-40304195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 36
               

               
Conread position:
               
10-320
               

               
Cow position:
               
chr20:41119877-41119576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 36
               

               
Conread position:
               
11-185
               

               
Cow position:
               
chr20:6848592-6848410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
45, 155
               

               
Conread position:
               
11-189
               

               
Cow position:
               
chr20:6890681-6890489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
11-193
               

               
Cow position:
               
chr20:29633034-29633211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
152, 67
               

               
Conread position:
               
11-198
               

               
Cow position:
               
chr20:35365010-35364827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
69, 35
               

               
Conread position:
               
11-235
               

               
Cow position:
               
chr20:22007467-22007242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
37, 79
               

               
Conread position:
               
11-320
               

               
Cow position:
               
chr20:7806591-7806909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
11-320
               

               
Cow position:
               
chr20:40256935-40256638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 97
               

               
Conread position:
               
12-232
               

               
Cow position:
               
chr20:5950674-5950888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
12-256
               

               
Cow position:
               
chr20:42469725-42469484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 54
               

               
Conread position:
               
13-107
               

               
Cow position:
               
chr20:39247873-39247781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
63, 39
               

               
Conread position:
               
13-152
               

               
Cow position:
               
chr20:27407912-27408056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 29
               

               
Conread position:
               
13-160
               

               
Cow position:
               
chr20:37165688-37165540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
65, 33
               

               
Conread position:
               
13-165
               

               
Cow position:
               
chr20:32068890-32069048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
13-171
               

               
Cow position:
               
chr20:20739325-20739487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
37, 11
               

               
Conread position:
               
13-176
               

               
Cow position:
               
chr20:38551336-38551171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
64, 50
               

               
Conread position:
               
13-190
               

               
Cow position:
               
chr20:15235731-15235547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
65, 33
               

               
Conread position:
               
13-193
               

               
Cow position:
               
chr20:40185718-40185893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
13-194
               

               
Cow position:
               
chr20:23936445-23936635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
32, 150
               

               
Conread position:
               
13-223
               

               
Cow position:
               
chr20:22235277-22235062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 33
               

               
Conread position:
               
13-239
               

               
Cow position:
               
chr20:7659256-7659475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
13-244
               

               
Cow position:
               
chr20:35958608-35958378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 155
               

               
Conread position:
               
13-291
               

               
Cow position:
               
chr20:33435204-33435480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 63
               

               
Conread position:
               
13-292
               

               
Cow position:
               
chr20:13752202-13751930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 33
               

               
Conread position:
               
13-304
               

               
Cow position:
               
chr20:20352952-20353245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 64
               

               
Conread position:
               
13-306
               

               
Cow position:
               
chr20:12048360-12048075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 124
               

               
Conread position:
               
13-318
               

               
Cow position:
               
chr20:2819506-2819222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
13-318
               

               
Cow position:
               
chr20:23064868-23065182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 24
               

               
Conread position:
               
13-319
               

               
Cow position:
               
chr20:24391942-24391655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
13-320
               

               
Cow position:
               
chr20:4621382-4621688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 65
               

               
Conread position:
               
13-320
               

               
Cow position:
               
chr20:6096531-6096831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 40
               

               
Conread position:
               
13-320
               

               
Cow position:
               
chr20:11453392-11453702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 65
               

               
Conread position:
               
13-320
               

               
Cow position:
               
chr20:30690075-30689765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 65
               

               
Conread position:
               
13-320
               

               
Cow position:
               
chr20:33169910-33170218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 10
               

               
Conread position:
               
13-320
               

               
Cow position:
               
chr20:33532270-33531963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 49
               

               
Conread position:
               
14-127
               

               
Cow position:
               
chr20:32988879-32988985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
14-155
               

               
Cow position:
               
chr20:14980552-14980696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
65, 32
               

               
Conread position:
               
14-165
               

               
Cow position:
               
chr20:11542322-11542474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
90, 32
               

               
Conread position:
               
14-171
               

               
Cow position:
               
chr20:8556309-8556472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
61, 31
               

               
Conread position:
               
14-183
               

               
Cow position:
               
chr20:34251716-34251888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
37, 93
               

               
Conread position:
               
14-195
               

               
Cow position:
               
chr20:5826902-5826717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
62, 32
               

               
Conread position:
               
14-205
               

               
Cow position:
               
chr20:11340837-11341037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
14-210
               

               
Cow position:
               
chr20:21016445-21016243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
33, 153
               

               
Conread position:
               
14-246
               

               
Cow position:
               
chr20:20201953-20201719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
34, 69
               

               
Conread position:
               
14-279
               

               
Cow position:
               
chr20:3035065-3034791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 149
               

               
Conread position:
               
14-291
               

               
Cow position:
               
chr20:6054554-6054821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 88
               

               
Conread position:
               
14-327
               

               
Cow position:
               
chr20:7132315-7132005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
35, 240
               

               
Conread position:
               
15-127
               

               
Cow position:
               
chr20:5636444-5636327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
61, 31
               

               
Conread position:
               
15-135
               

               
Cow position:
               
chr20:5814535-5814409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
15-165
               

               
Cow position:
               
chr20:9923549-9923406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
15-193
               

               
Cow position:
               
chr20:34777146-34776966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
36, 64
               

               
Conread position:
               
15-204
               

               
Cow position:
               
chr20:35176805-35177004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
33, 123
               

               
Conread position:
               
15-221
               

               
Cow position:
               
chr20:18551329-18551115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
33, 122
               

               
Conread position:
               
15-263
               

               
Cow position:
               
chr20:7426228-7426479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 31
               

               
Conread position:
               
15-289
               

               
Cow position:
               
chr20:24002279-24002013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 62
               

               
Conread position:
               
15-319
               

               
Cow position:
               
chr20:17845922-17845608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 239
               

               
Conread position:
               
16-176
               

               
Cow position:
               
chr20:41374639-41374483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
59, 30
               

               
Conread position:
               
17-198
               

               
Cow position:
               
chr20:8910880-8910699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
28, 72
               

               
Conread position:
               
17-212
               

               
Cow position:
               
chr20:10200306-10200102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
19-269
               

               
Cow position:
               
chr20:1139819-1140070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
144, 59
               

               
Conread position:
               
22-191
               

               
Cow position:
               
chr20:13023521-13023696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
24-318
               

               
Cow position:
               
chr20:3658747-3659039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 55
               

               
Conread position:
               
28-153
               

               
Cow position:
               
chr20:3141529-3141404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.