Cow genome map

Conread name: rthg35_b22.y1

Conread position: 5-195
Cow position:
Alignm length: 199
Alignm identity: 150
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 73, 6

Conread position: 5-316
Cow position:
Alignm length: 320
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 12

Conread position: 5-320
Cow position:
Alignm length: 326
Alignm identity: 226
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 66, 8

Conread position: 5-320
Cow position:
Alignm length: 324
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 12

Conread position: 5-324
Cow position:
Alignm length: 322
Alignm identity: 223
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 296, 6

Conread position: 7-320
Cow position:
Alignm length: 322
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 162

Conread position: 8-128
Cow position:
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 74

Conread position: 8-137
Cow position:
Alignm length: 132
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 68, 91

Conread position: 9-184
Cow position:
Alignm length: 179
Alignm identity: 139
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 65, 37

Conread position: 9-186
Cow position:
Alignm length: 184
Alignm identity: 154
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 67, 37

Conread position: 9-231
Cow position:
Alignm length: 230
Alignm identity: 175
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 67, 110

Conread position: 9-281
Cow position:
Alignm length: 282
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 66

Conread position: 9-303
Cow position:
Alignm length: 298
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 31

Conread position: 10-115
Cow position:
Alignm length: 108
Alignm identity: 92
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 67, 36

Conread position: 10-122
Cow position:
Alignm length: 117
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 36

Conread position: 10-135
Cow position:
Alignm length: 133
Alignm identity: 106
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 10-142
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 66, 35

Conread position: 10-143
Cow position:
Alignm length: 134
Alignm identity: 105
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 10-144
Cow position:
Alignm length: 141
Alignm identity: 113
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 66, 35

Conread position: 10-145
Cow position:
Alignm length: 139
Alignm identity: 117
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 42, 0

Conread position: 10-147
Cow position:
Alignm length: 143
Alignm identity: 117
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 66, 0

Conread position: 10-157
Cow position:
Alignm length: 149
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 28, 36

Conread position: 10-164
Cow position:
Alignm length: 164
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 19, 86

Conread position: 10-164
Cow position:
Alignm length: 159
Alignm identity: 128
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 64, 0

Conread position: 10-164
Cow position:
Alignm length: 155
Alignm identity: 125
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 32, 0

Conread position: 10-165
Cow position:
Alignm length: 158
Alignm identity: 126
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 66, 20

Conread position: 10-165
Cow position:
Alignm length: 157
Alignm identity: 116
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 65, 59

Conread position: 10-165
Cow position:
Alignm length: 161
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 90, 27

Conread position: 10-175
Cow position:
Alignm length: 167
Alignm identity: 130
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 153, 36

Conread position: 10-176
Cow position:
Alignm length: 174
Alignm identity: 145
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 68, 35

Conread position: 10-176
Cow position:
Alignm length: 168
Alignm identity: 128
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 42, 98

Conread position: 10-178
Cow position:
Alignm length: 176
Alignm identity: 138
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 66, 0

Conread position: 10-185
Cow position:
Alignm length: 183
Alignm identity: 141
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 66, 36

Conread position: 10-186
Cow position:
Alignm length: 186
Alignm identity: 136
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 41, 106

Conread position: 10-186
Cow position:
Alignm length: 185
Alignm identity: 154
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 66, 20

Conread position: 10-187
Cow position:
Alignm length: 181
Alignm identity: 135
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 90, 58

Conread position: 10-189
Cow position:
Alignm length: 187
Alignm identity: 146
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 33, 73

Conread position: 10-191
Cow position:
Alignm length: 182
Alignm identity: 138
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 10-192
Cow position:
Alignm length: 190
Alignm identity: 149
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 67, 0

Conread position: 10-195
Cow position:
Alignm length: 193
Alignm identity: 147
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 65, 51

Conread position: 10-195
Cow position:
Alignm length: 191
Alignm identity: 149
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 91, 65

Conread position: 10-198
Cow position:
Alignm length: 198
Alignm identity: 155
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 66, 0

Conread position: 10-198
Cow position:
Alignm length: 194
Alignm identity: 154
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 90, 29

Conread position: 10-199
Cow position:
Alignm length: 200
Alignm identity: 160
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 66, 43

Conread position: 10-207
Cow position:
Alignm length: 201
Alignm identity: 148
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 68, 169

Conread position: 10-211
Cow position:
Alignm length: 205
Alignm identity: 153
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 65, 36

Conread position: 10-211
Cow position:
Alignm length: 207
Alignm identity: 153
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 42, 68

Conread position: 10-232
Cow position:
Alignm length: 227
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 36

Conread position: 10-237
Cow position:
Alignm length: 234
Alignm identity: 166
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 66, 129

Conread position: 10-253
Cow position:
Alignm length: 247
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 194

Conread position: 10-254
Cow position:
Alignm length: 267
Alignm identity: 195
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 33, 57

Conread position: 10-256
Cow position:
Alignm length: 264
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 145

Conread position: 10-261
Cow position:
Alignm length: 259
Alignm identity: 185
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 38, 95

Conread position: 10-261
Cow position:
Alignm length: 257
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 61

Conread position: 10-270
Cow position:
Alignm length: 268
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 35

Conread position: 10-272
Cow position:
Alignm length: 271
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 194

Conread position: 10-273
Cow position:
Alignm length: 276
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 19

Conread position: 10-287
Cow position:
Alignm length: 286
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 202

Conread position: 10-287
Cow position:
Alignm length: 284
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 10-293
Cow position:
Alignm length: 287
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 36

Conread position: 10-304
Cow position:
Alignm length: 306
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 70

Conread position: 10-304
Cow position:
Alignm length: 300
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 31

Conread position: 10-305
Cow position:
Alignm length: 297
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 68

Conread position: 10-307
Cow position:
Alignm length: 306
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 73

Conread position: 10-307
Cow position:
Alignm length: 309
Alignm identity: 227
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 35, 155

Conread position: 10-309
Cow position:
Alignm length: 306
Alignm identity: 227
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 42, 103

Conread position: 10-317
Cow position:
Alignm length: 312
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 70

Conread position: 10-318
Cow position:
Alignm length: 310
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 58

Conread position: 10-318
Cow position:
Alignm length: 311
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 33

Conread position: 10-318
Cow position:
Alignm length: 315
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 33

Conread position: 10-318
Cow position:
Alignm length: 329
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 71

Conread position: 10-318
Cow position:
Alignm length: 319
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 32

Conread position: 10-318
Cow position:
Alignm length: 318
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 130

Conread position: 10-318
Cow position:
Alignm length: 315
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 86

Conread position: 10-318
Cow position:
Alignm length: 319
Alignm identity: 229
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 205, 36

Conread position: 10-319
Cow position:
Alignm length: 316
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 34

Conread position: 10-320
Cow position:
Alignm length: 318
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 35

Conread position: 10-320
Cow position:
Alignm length: 318
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 157

Conread position: 10-320
Cow position:
Alignm length: 318
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 69

Conread position: 10-320
Cow position:
Alignm length: 321
Alignm identity: 228
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 145, 34

Conread position: 10-320
Cow position:
Alignm length: 327
Alignm identity: 212
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 143, 34

Conread position: 10-320
Cow position:
Alignm length: 313
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 52

Conread position: 10-320
Cow position:
Alignm length: 316
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 34

Conread position: 10-320
Cow position:
Alignm length: 314
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 96

Conread position: 10-320
Cow position:
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 35

Conread position: 10-320
Cow position:
Alignm length: 317
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 184

Conread position: 10-320
Cow position:
Alignm length: 318
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 34

Conread position: 10-320
Cow position:
Alignm length: 315
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 80

Conread position: 10-320
Cow position:
Alignm length: 317
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 10-322
Cow position:
Alignm length: 319
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 36

Conread position: 10-323
Cow position:
Alignm length: 319
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 69

Conread position: 10-324
Cow position:
Alignm length: 322
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 35

Conread position: 11-193
Cow position:
Alignm length: 187
Alignm identity: 143
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 120, 35

Conread position: 11-227
Cow position:
Alignm length: 226
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 11-284
Cow position:
Alignm length: 276
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 12

Conread position: 11-288
Cow position:
Alignm length: 285
Alignm identity: 209
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 21, 35

Conread position: 11-318
Cow position:
Alignm length: 319
Alignm identity: 219
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 53, 34

Conread position: 11-324
Cow position:
Alignm length: 321
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 69

Conread position: 12-288
Cow position:
Alignm length: 280
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 32

Conread position: 13-101
Cow position:
Alignm length: 91
Alignm identity: 79
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 13-130
Cow position:
Alignm length: 121
Alignm identity: 100
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 63, 30

Conread position: 13-165
Cow position:
Alignm length: 155
Alignm identity: 126
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 63, 118

Conread position: 13-184
Cow position:
Alignm length: 177
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 65, 31

Conread position: 13-222
Cow position:
Alignm length: 211
Alignm identity: 160
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 155, 65

Conread position: 13-238
Cow position:
Alignm length: 227
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 32

Conread position: 13-297
Cow position:
Alignm length: 289
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 33

Conread position: 13-302
Cow position:
Alignm length: 297
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 33

Conread position: 13-304
Cow position:
Alignm length: 300
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 65

Conread position: 13-318
Cow position:
Alignm length: 308
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 33

Conread position: 13-319
Cow position:
Alignm length: 309
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 47

Conread position: 13-320
Cow position:
Alignm length: 309
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 62

Conread position: 13-320
Cow position:
Alignm length: 312
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 32

Conread position: 13-320
Cow position:
Alignm length: 315
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 69

Conread position: 13-320
Cow position:
Alignm length: 322
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 14-151
Cow position:
Alignm length: 141
Alignm identity: 121
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 51, 32

Conread position: 14-155
Cow position:
Alignm length: 151
Alignm identity: 123
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 14-158
Cow position:
Alignm length: 148
Alignm identity: 122
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 48, 0

Conread position: 14-165
Cow position:
Alignm length: 152
Alignm identity: 122
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 29, 0

Conread position: 14-176
Cow position:
Alignm length: 169
Alignm identity: 139
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 62, 0

Conread position: 14-193
Cow position:
Alignm length: 194
Alignm identity: 149
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 62, 0

Conread position: 14-195
Cow position:
Alignm length: 185
Alignm identity: 151
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 39, 151

Conread position: 14-270
Cow position:
Alignm length: 258
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 62

Conread position: 14-291
Cow position:
Alignm length: 280
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 144

Conread position: 14-299
Cow position:
Alignm length: 293
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 112

Conread position: 14-318
Cow position:
Alignm length: 320
Alignm identity: 233
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 88, 49

Conread position: 14-320
Cow position:
Alignm length: 308
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 42

Conread position: 14-320
Cow position:
Alignm length: 330
Alignm identity: 239
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 61, 32

Conread position: 15-152
Cow position:
Alignm length: 144
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 61, 31

Conread position: 15-163
Cow position:
Alignm length: 149
Alignm identity: 118
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 79, 0

Conread position: 15-165
Cow position:
Alignm length: 151
Alignm identity: 117
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 15-165
Cow position:
Alignm length: 154
Alignm identity: 121
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 15-217
Cow position:
Alignm length: 209
Alignm identity: 162
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 8, 92

Conread position: 15-238
Cow position:
Alignm length: 227
Alignm identity: 166
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 34, 25

Conread position: 15-257
Cow position:
Alignm length: 243
Alignm identity: 188
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 31, 0

Conread position: 15-318
Cow position:
Alignm length: 322
Alignm identity: 223
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 153, 30

Conread position: 15-320
Cow position:
Alignm length: 316
Alignm identity: 227
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 38, 171

Conread position: 15-320
Cow position:
Alignm length: 307
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 30

Conread position: 15-320
Cow position:
Alignm length: 313
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 91

Conread position: 17-316
Cow position:
Alignm length: 309
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 168

Conread position: 17-320
Cow position:
Alignm length: 309
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 155

Conread position: 19-319
Cow position:
Alignm length: 301
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 19-320
Cow position:
Alignm length: 312
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 51

Conread position: 21-133
Cow position:
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 22-323
Cow position:
Alignm length: 310
Alignm identity: 222
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 173

Conread position: 32-318
Cow position:
Alignm length: 290
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 60

Show alignments to all cow chromosomes.